RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 KRTAP4-6Q9BYQ5 205 aa4.73□□□□□ -1.65
PRKCSH-210ENST00000589990 Q1T7F1 81 aa4.72□□□□□ -1.65
PRKCSH-210ENST00000589990 UQCR11O14957 56 aa4.71□□□□□ -1.66
PRKCSH-210ENST00000589990 PSPHP1O15172 72 aa4.71□□□□□ -1.66
PRKCSH-210ENST00000589990 KRTAP12-1P59990 96 aa4.71□□□□□ -1.66
PRKCSH-210ENST00000589990 RPS28P62857 69 aaKnown RBP4.71□□□□□ -1.66
PRKCSH-210ENST00000589990 KRTAP5-4Q6L8H1 288 aa4.66□□□□□ -1.66
PRKCSH-210ENST00000589990 KRTAP5-3Q6L8H2 238 aa4.66□□□□□ -1.66
PRKCSH-210ENST00000589990 MIR22HGQ0VDD5 57 aa4.64□□□□□ -1.67
PRKCSH-210ENST00000589990 MT1GP13640 62 aa4.62□□□□□ -1.67
PRKCSH-210ENST00000589990 MT1MQ8N339 61 aa4.6□□□□□ -1.67
PRKCSH-210ENST00000589990 KRTAP4-3Q9BYR4 195 aa4.6□□□□□ -1.67
PRKCSH-210ENST00000589990 SPRR5A0A1B0GTR4 108 aa4.59□□□□□ -1.67
PRKCSH-210ENST00000589990 A6NED7 52 aa4.57□□□□□ -1.68
PRKCSH-210ENST00000589990 KRTAP19-5Q3LI72 72 aa4.57□□□□□ -1.68
PRKCSH-210ENST00000589990 PP632Q6XCG6 107 aa4.53□□□□□ -1.68
PRKCSH-210ENST00000589990 K7ERS5 55 aa4.52□□□□□ -1.69
PRKCSH-210ENST00000589990 MT1LQ93083 61 aa4.5□□□□□ -1.69
PRKCSH-210ENST00000589990 C10orf95Q9H7T3 257 aa4.49□□□□□ -1.69
PRKCSH-210ENST00000589990 TNP1P09430 55 aa4.44□□□□□ -1.7
PRKCSH-210ENST00000589990 KRTAP20-2Q3LI61 65 aa4.44□□□□□ -1.7
PRKCSH-210ENST00000589990 CDC42SE1Q9NRR8 79 aa4.39□□□□□ -1.71
PRKCSH-210ENST00000589990 KRTAP4-7Q9BYR0 210 aa4.34□□□□□ -1.71
PRKCSH-210ENST00000589990 LCE3AQ5TA76 89 aa4.31□□□□□ -1.72
PRKCSH-210ENST00000589990 KRTAP25-1Q3LHN0 102 aa4.3□□□□□ -1.72
PRKCSH-210ENST00000589990 KRTAP5-5Q701N2 237 aaPredicted RBP4.27□□□□□ -1.73
PRKCSH-210ENST00000589990 SYNE1Q8NF91 8797 aaKnown RBP4.25□□□□□ -1.73
PRKCSH-210ENST00000589990 ROMO1P60602 79 aa4.24□□□□□ -1.73
PRKCSH-210ENST00000589990 BRK1Q8WUW1 75 aa4.22□□□□□ -1.73
PRKCSH-210ENST00000589990 KRTAP12-4P60329 112 aa4.19□□□□□ -1.74
PRKCSH-210ENST00000589990 MUC5ACP98088 5654 aa4.16□□□□□ -1.74
PRKCSH-210ENST00000589990 KRTAP4-11Q9BYQ6 195 aa4.16□□□□□ -1.74
PRKCSH-210ENST00000589990 KRTAP12-3P60328 96 aa4.15□□□□□ -1.75
PRKCSH-210ENST00000589990 AHNAKQ09666 5890 aaKnown RBP4.15□□□□□ -1.75
PRKCSH-210ENST00000589990 LOC100996750A0A140TA64 210 aa4.13□□□□□ -1.75
PRKCSH-210ENST00000589990 KRTAP23-1A1A580 65 aa4.13□□□□□ -1.75
PRKCSH-210ENST00000589990 MUC5BQ9HC84 5762 aaPredicted RBP4.11□□□□□ -1.75
PRKCSH-210ENST00000589990 KRTAP5-8O75690 187 aa4.08□□□□□ -1.76
PRKCSH-210ENST00000589990 KRTAP5-2Q701N4 177 aa4□□□□□ -1.77
PRKCSH-210ENST00000589990 PMAIP1Q13794 54 aa3.99□□□□□ -1.77
PRKCSH-210ENST00000589990 KRTAP15-1Q3LI76 137 aa3.97□□□□□ -1.77
PRKCSH-210ENST00000589990 OBSCNQ5VST9 7968 aa3.92□□□□□ -1.78
PRKCSH-210ENST00000589990 KRTAP19-4Q3LI73 84 aa3.91□□□□□ -1.78
PRKCSH-210ENST00000589990 PRO0628Q9UI54 55 aa3.88□□□□□ -1.79
PRKCSH-210ENST00000589990 KRTAP9-9Q9BYP9 154 aa3.87□□□□□ -1.79
PRKCSH-210ENST00000589990 KRTAP6-1Q3LI64 71 aa3.85□□□□□ -1.79
PRKCSH-210ENST00000589990 LCE3CQ5T5A8 94 aa3.85□□□□□ -1.79
PRKCSH-210ENST00000589990 MT1AP04731 61 aa3.79□□□□□ -1.8
PRKCSH-210ENST00000589990 KRTAP6-2Q3LI66 62 aa3.77□□□□□ -1.81
PRKCSH-210ENST00000589990 PRAC1Q96KF2 57 aa3.77□□□□□ -1.81
PRKCSH-210ENST00000589990 KRTAP9-4Q9BYQ2 154 aa3.71□□□□□ -1.82
PRKCSH-210ENST00000589990 KRTAP5-1Q6L8H4 278 aa3.69□□□□□ -1.82
PRKCSH-210ENST00000589990 KTN1-AS1Q86SY8 53 aa3.65□□□□□ -1.83
PRKCSH-210ENST00000589990 KRTAP9-6A8MVA2 160 aa3.6□□□□□ -1.83
PRKCSH-210ENST00000589990 SVIPQ8NHG7 77 aa3.51□□□□□ -1.85
PRKCSH-210ENST00000589990 MT3P25713 68 aa3.45□□□□□ -1.86
PRKCSH-210ENST00000589990 LCE1EQ5T753 118 aa3.27□□□□□ -1.89
PRKCSH-210ENST00000589990 KRTAP4-2Q9BYR5 136 aa3.23□□□□□ -1.89
PRKCSH-210ENST00000589990 LCE1BQ5T7P3 118 aa3.2□□□□□ -1.9
PRKCSH-210ENST00000589990 LUZP6Q538Z0 58 aa3.17□□□□□ -1.9
PRKCSH-210ENST00000589990 KRTAP4-12Q9BQ66 201 aa3.15□□□□□ -1.91
PRKCSH-210ENST00000589990 LCE1CQ5T751 118 aa3.06□□□□□ -1.92
PRKCSH-210ENST00000589990 KRTAP5-11Q6L8G4 156 aa2.92□□□□□ -1.94
PRKCSH-210ENST00000589990 PHGR1C9JFL3 82 aa2.86□□□□□ -1.95
PRKCSH-210ENST00000589990 LCE3DQ9BYE3 92 aa2.84□□□□□ -1.95
PRKCSH-210ENST00000589990 LCE1FQ5T754 118 aa2.81□□□□□ -1.96
PRKCSH-210ENST00000589990 NDUFAF8A1L188 74 aa2.78□□□□□ -1.96
PRKCSH-210ENST00000589990 LCE3EQ5T5B0 92 aa2.72□□□□□ -1.97
PRKCSH-210ENST00000589990 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.72□□□□□ -1.97
PRKCSH-210ENST00000589990 KRTAP21-2Q3LI59 83 aa2.54□□□□□ -2
PRKCSH-210ENST00000589990 KRTAP4-4Q9BYR3 166 aa2.46□□□□□ -2.02
PRKCSH-210ENST00000589990 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.02
PRKCSH-210ENST00000589990 A0A0A0MQY5 61 aa2.35□□□□□ -2.03
PRKCSH-210ENST00000589990 H3BS24 57 aa2.28□□□□□ -2.04
PRKCSH-210ENST00000589990 INE1O15225 51 aa2.27□□□□□ -2.05
PRKCSH-210ENST00000589990 PRM1P04553 51 aa2.2□□□□□ -2.06
PRKCSH-210ENST00000589990 KRTAP21-1Q3LI58 79 aa2.13□□□□□ -2.07
PRKCSH-210ENST00000589990 MUC16Q8WXI7 14507 aa1.69□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 110.4 ms