RNA–Protein interactions for RNA: ENST00000589969.1

NFIC-209, Transcript of nuclear factor I C, humanhuman

TSL 3

Gene NFIC, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIC-209ENST00000589969 A6NED7 52 aa7.45□□□□□ -1.22
NFIC-209ENST00000589969 MIR22HGQ0VDD5 57 aa7.38□□□□□ -1.23
NFIC-209ENST00000589969 MT1MQ8N339 61 aa7.35□□□□□ -1.23
NFIC-209ENST00000589969 MT1LQ93083 61 aa7.33□□□□□ -1.24
NFIC-209ENST00000589969 LCE1DQ5T752 114 aa7.32□□□□□ -1.24
NFIC-209ENST00000589969 LCE4AQ5TA78 99 aa7.32□□□□□ -1.24
NFIC-209ENST00000589969 A8MU10 97 aa7.3□□□□□ -1.24
NFIC-209ENST00000589969 TNP1P09430 55 aa7.29□□□□□ -1.24
NFIC-209ENST00000589969 C10orf95Q9H7T3 257 aa7.25□□□□□ -1.25
NFIC-209ENST00000589969 LCE3AQ5TA76 89 aa7.24□□□□□ -1.25
NFIC-209ENST00000589969 CDC42SE1Q9NRR8 79 aa7.24□□□□□ -1.25
NFIC-209ENST00000589969 HMCN1Q96RW7 5635 aa7.23□□□□□ -1.25
NFIC-209ENST00000589969 K7ERS5 55 aa7.22□□□□□ -1.25
NFIC-209ENST00000589969 MT4P47944 62 aa7.21□□□□□ -1.26
NFIC-209ENST00000589969 BRK1Q8WUW1 75 aa7.2□□□□□ -1.26
NFIC-209ENST00000589969 KRTAP4-3Q9BYR4 195 aa7.13□□□□□ -1.27
NFIC-209ENST00000589969 KRTAP5-4Q6L8H1 288 aa7.12□□□□□ -1.27
NFIC-209ENST00000589969 KRTAP12-3P60328 96 aa7.01□□□□□ -1.29
NFIC-209ENST00000589969 AHNAK2Q8IVF2 5795 aa7□□□□□ -1.29
NFIC-209ENST00000589969 KRTAP4-6Q9BYQ5 205 aa6.98□□□□□ -1.29
NFIC-209ENST00000589969 KRTAP4-7Q9BYR0 210 aa6.91□□□□□ -1.3
NFIC-209ENST00000589969 KRTAP5-10Q6L8G5 202 aa6.9□□□□□ -1.3
NFIC-209ENST00000589969 PRO0628Q9UI54 55 aa6.88□□□□□ -1.31
NFIC-209ENST00000589969 PMAIP1Q13794 54 aa6.8□□□□□ -1.32
NFIC-209ENST00000589969 KRTAP25-1Q3LHN0 102 aa6.8□□□□□ -1.32
NFIC-209ENST00000589969 ROMO1P60602 79 aa6.76□□□□□ -1.33
NFIC-209ENST00000589969 KRTAP5-5Q701N2 237 aaPredicted RBP6.76□□□□□ -1.33
NFIC-209ENST00000589969 KRTAP20-2Q3LI61 65 aa6.73□□□□□ -1.33
NFIC-209ENST00000589969 SPRR5A0A1B0GTR4 108 aa6.72□□□□□ -1.33
NFIC-209ENST00000589969 KRTAP19-4Q3LI73 84 aa6.7□□□□□ -1.34
NFIC-209ENST00000589969 KRTAP5-3Q6L8H2 238 aa6.7□□□□□ -1.34
NFIC-209ENST00000589969 KRTAP12-4P60329 112 aa6.68□□□□□ -1.34
NFIC-209ENST00000589969 KRTAP5-7Q6L8G8 165 aa6.67□□□□□ -1.34
NFIC-209ENST00000589969 LOC100996750A0A140TA64 210 aa6.56□□□□□ -1.36
NFIC-209ENST00000589969 KRTAP23-1A1A580 65 aa6.56□□□□□ -1.36
NFIC-209ENST00000589969 KRTAP15-1Q3LI76 137 aa6.49□□□□□ -1.37
NFIC-209ENST00000589969 SYNE1Q8NF91 8797 aaKnown RBP6.48□□□□□ -1.37
NFIC-209ENST00000589969 LCE3CQ5T5A8 94 aa6.43□□□□□ -1.38
NFIC-209ENST00000589969 KTN1-AS1Q86SY8 53 aa6.43□□□□□ -1.38
NFIC-209ENST00000589969 PRAC1Q96KF2 57 aa6.32□□□□□ -1.4
NFIC-209ENST00000589969 MT1AP04731 61 aa6.25□□□□□ -1.41
NFIC-209ENST00000589969 KRTAP5-2Q701N4 177 aa6.21□□□□□ -1.42
NFIC-209ENST00000589969 KRTAP4-11Q9BYQ6 195 aa6.2□□□□□ -1.42
NFIC-209ENST00000589969 KRTAP6-1Q3LI64 71 aa6.19□□□□□ -1.42
NFIC-209ENST00000589969 SVIPQ8NHG7 77 aa6.17□□□□□ -1.42
NFIC-209ENST00000589969 KRTAP9-4Q9BYQ2 154 aa6.06□□□□□ -1.44
NFIC-209ENST00000589969 KRTAP9-6A8MVA2 160 aa6.02□□□□□ -1.45
NFIC-209ENST00000589969 KRTAP5-8O75690 187 aa5.98□□□□□ -1.45
NFIC-209ENST00000589969 KRTAP6-2Q3LI66 62 aa5.97□□□□□ -1.45
NFIC-209ENST00000589969 OBSCNQ5VST9 7968 aa5.84□□□□□ -1.47
NFIC-209ENST00000589969 AHNAKQ09666 5890 aaKnown RBP5.82□□□□□ -1.48
NFIC-209ENST00000589969 MUC5BQ9HC84 5762 aaPredicted RBP5.8□□□□□ -1.48
NFIC-209ENST00000589969 MUC5ACP98088 5654 aa5.8□□□□□ -1.48
NFIC-209ENST00000589969 MT3P25713 68 aa5.75□□□□□ -1.49
NFIC-209ENST00000589969 KRTAP9-9Q9BYP9 154 aa5.74□□□□□ -1.49
NFIC-209ENST00000589969 KRTAP5-1Q6L8H4 278 aa5.59□□□□□ -1.51
NFIC-209ENST00000589969 LUZP6Q538Z0 58 aa5.35□□□□□ -1.55
NFIC-209ENST00000589969 LCE1EQ5T753 118 aa5.34□□□□□ -1.55
NFIC-209ENST00000589969 KRTAP4-2Q9BYR5 136 aa5.01□□□□□ -1.61
NFIC-209ENST00000589969 LCE1BQ5T7P3 118 aa4.99□□□□□ -1.61
NFIC-209ENST00000589969 NDUFAF8A1L188 74 aa4.95□□□□□ -1.62
NFIC-209ENST00000589969 LCE1CQ5T751 118 aa4.94□□□□□ -1.62
NFIC-209ENST00000589969 LCE3DQ9BYE3 92 aa4.61□□□□□ -1.67
NFIC-209ENST00000589969 KRTAP4-12Q9BQ66 201 aa4.58□□□□□ -1.68
NFIC-209ENST00000589969 KRTAP5-11Q6L8G4 156 aa4.49□□□□□ -1.69
NFIC-209ENST00000589969 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.48□□□□□ -1.69
NFIC-209ENST00000589969 LCE1FQ5T754 118 aa4.44□□□□□ -1.7
NFIC-209ENST00000589969 A0A0A0MQY5 61 aa4.41□□□□□ -1.7
NFIC-209ENST00000589969 LCE3EQ5T5B0 92 aa4.31□□□□□ -1.72
NFIC-209ENST00000589969 INE1O15225 51 aa4.13□□□□□ -1.75
NFIC-209ENST00000589969 KRTAP21-2Q3LI59 83 aa4.09□□□□□ -1.75
NFIC-209ENST00000589969 PHGR1C9JFL3 82 aa4.03□□□□□ -1.76
NFIC-209ENST00000589969 H3BS24 57 aa3.97□□□□□ -1.77
NFIC-209ENST00000589969 KRTAP4-4Q9BYR3 166 aa3.74□□□□□ -1.81
NFIC-209ENST00000589969 MUC19Q7Z5P9 8384 aa3.61□□□□□ -1.83
NFIC-209ENST00000589969 PRM1P04553 51 aa3.49□□□□□ -1.85
NFIC-209ENST00000589969 KRTAP21-1Q3LI58 79 aa3.09□□□□□ -1.91
NFIC-209ENST00000589969 MUC16Q8WXI7 14507 aa2.53□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 118.7 ms