RNA–Protein interactions for RNA: ENST00000589882.1

TREM1-206, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

Gene TREM1, Length 1,876 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-206ENST00000589882 KRTAP2-1Q9BYU5 128 aa4.34□□□□□ -1.71
TREM1-206ENST00000589882 MT1XP80297 61 aa4.31□□□□□ -1.72
TREM1-206ENST00000589882 KRTAP9-7A8MTY7 169 aa4.28□□□□□ -1.72
TREM1-206ENST00000589882 M0R2T5 61 aa4.28□□□□□ -1.72
TREM1-206ENST00000589882 SSPOA2VEC9 5147 aa4.26□□□□□ -1.73
TREM1-206ENST00000589882 USH2AO75445 5202 aa4.26□□□□□ -1.73
TREM1-206ENST00000589882 LCE5AQ5TCM9 118 aa4.25□□□□□ -1.73
TREM1-206ENST00000589882 KRTAP10-7P60409 375 aaPredicted RBP4.2□□□□□ -1.74
TREM1-206ENST00000589882 MT1BP07438 61 aa4.2□□□□□ -1.74
TREM1-206ENST00000589882 MT1FP04733 61 aa4.19□□□□□ -1.74
TREM1-206ENST00000589882 MT2AP02795 61 aa4.18□□□□□ -1.74
TREM1-206ENST00000589882 KRTAP19-5Q3LI72 72 aa4.18□□□□□ -1.74
TREM1-206ENST00000589882 FCGBPQ9Y6R7 5405 aaPredicted RBP4.16□□□□□ -1.74
TREM1-206ENST00000589882 KRTAP9-6A8MVA2 160 aa4.15□□□□□ -1.74
TREM1-206ENST00000589882 KRTAP19-4Q3LI73 84 aa4.14□□□□□ -1.75
TREM1-206ENST00000589882 KRTAP9-3Q9BYQ3 159 aa4.14□□□□□ -1.75
TREM1-206ENST00000589882 MACF1Q9UPN3 7388 aaKnown RBP4.09□□□□□ -1.75
TREM1-206ENST00000589882 SYNE2Q8WXH0 6885 aaKnown RBP4.06□□□□□ -1.76
TREM1-206ENST00000589882 KRTAP19-6Q3LI70 58 aa3.95□□□□□ -1.78
TREM1-206ENST00000589882 KRTAP12-4P60329 112 aa3.93□□□□□ -1.78
TREM1-206ENST00000589882 KRTAP6-3Q3LI67 103 aa3.87□□□□□ -1.79
TREM1-206ENST00000589882 NEBP20929 6669 aa3.85□□□□□ -1.79
TREM1-206ENST00000589882 KRTAP19-7Q3SYF9 63 aa3.82□□□□□ -1.8
TREM1-206ENST00000589882 MUC12Q9UKN1 5478 aa3.82□□□□□ -1.8
TREM1-206ENST00000589882 MT1LQ93083 61 aa3.79□□□□□ -1.8
TREM1-206ENST00000589882 MT1EP04732 61 aa3.73□□□□□ -1.81
TREM1-206ENST00000589882 MDN1Q9NU22 5596 aa3.69□□□□□ -1.82
TREM1-206ENST00000589882 KMT2DO14686 5537 aa3.67□□□□□ -1.82
TREM1-206ENST00000589882 KRTAP20-1Q3LI63 56 aa3.65□□□□□ -1.82
TREM1-206ENST00000589882 KRTAP5-9P26371 169 aa3.64□□□□□ -1.83
TREM1-206ENST00000589882 MT1AP04731 61 aa3.58□□□□□ -1.84
TREM1-206ENST00000589882 KRTAP2-2Q9BYT5 123 aa3.56□□□□□ -1.84
TREM1-206ENST00000589882 PRM1P04553 51 aa3.54□□□□□ -1.84
TREM1-206ENST00000589882 MT1GP13640 62 aa3.54□□□□□ -1.84
TREM1-206ENST00000589882 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.52□□□□□ -1.85
TREM1-206ENST00000589882 LCE3EQ5T5B0 92 aa3.49□□□□□ -1.85
TREM1-206ENST00000589882 LCE3DQ9BYE3 92 aa3.46□□□□□ -1.86
TREM1-206ENST00000589882 KRTAP5-5Q701N2 237 aaPredicted RBP3.45□□□□□ -1.86
TREM1-206ENST00000589882 SPRR2FQ96RM1 72 aa3.45□□□□□ -1.86
TREM1-206ENST00000589882 SPRR2EP22531 72 aa3.44□□□□□ -1.86
TREM1-206ENST00000589882 SPRR2BP35325 72 aa3.44□□□□□ -1.86
TREM1-206ENST00000589882 SPRR2AP35326 72 aa3.44□□□□□ -1.86
TREM1-206ENST00000589882 KRTAP4-3Q9BYR4 195 aa3.43□□□□□ -1.86
TREM1-206ENST00000589882 MT1MQ8N339 61 aa3.42□□□□□ -1.86
TREM1-206ENST00000589882 LCE1AQ5T7P2 110 aa3.41□□□□□ -1.86
TREM1-206ENST00000589882 KRTAP19-3Q7Z4W3 81 aa3.35□□□□□ -1.87
TREM1-206ENST00000589882 SPRR2DP22532 72 aa3.33□□□□□ -1.88
TREM1-206ENST00000589882 KRTAP6-2Q3LI66 62 aa3.26□□□□□ -1.89
TREM1-206ENST00000589882 GPR98Q8WXG9 6306 aa3.25□□□□□ -1.89
TREM1-206ENST00000589882 KRTAP6-1Q3LI64 71 aa3.19□□□□□ -1.9
TREM1-206ENST00000589882 DSTQ03001 7570 aaKnown RBP3.19□□□□□ -1.9
TREM1-206ENST00000589882 SYNE1Q8NF91 8797 aaKnown RBP3.17□□□□□ -1.9
TREM1-206ENST00000589882 LCE1EQ5T753 118 aa3.13□□□□□ -1.91
TREM1-206ENST00000589882 HMCN1Q96RW7 5635 aa3.04□□□□□ -1.92
TREM1-206ENST00000589882 KRTAP5-11Q6L8G4 156 aa3.01□□□□□ -1.93
TREM1-206ENST00000589882 KRTAP5-4Q6L8H1 288 aa3.01□□□□□ -1.93
TREM1-206ENST00000589882 MT3P25713 68 aa3.01□□□□□ -1.93
TREM1-206ENST00000589882 AHNAK2Q8IVF2 5795 aa3□□□□□ -1.93
TREM1-206ENST00000589882 LCE1FQ5T754 118 aa2.93□□□□□ -1.94
TREM1-206ENST00000589882 MT4P47944 62 aa2.92□□□□□ -1.94
TREM1-206ENST00000589882 KRTAP5-10Q6L8G5 202 aa2.9□□□□□ -1.95
TREM1-206ENST00000589882 KRTAP5-1Q6L8H4 278 aa2.88□□□□□ -1.95
TREM1-206ENST00000589882 KRTAP4-4Q9BYR3 166 aa2.87□□□□□ -1.95
TREM1-206ENST00000589882 KRTAP5-7Q6L8G8 165 aa2.8□□□□□ -1.96
TREM1-206ENST00000589882 KRTAP20-2Q3LI61 65 aa2.72□□□□□ -1.97
TREM1-206ENST00000589882 KRTAP5-2Q701N4 177 aa2.66□□□□□ -1.98
TREM1-206ENST00000589882 OBSCNQ5VST9 7968 aa2.65□□□□□ -1.98
TREM1-206ENST00000589882 MUC5BQ9HC84 5762 aaPredicted RBP2.51□□□□□ -2.01
TREM1-206ENST00000589882 AHNAKQ09666 5890 aaKnown RBP2.51□□□□□ -2.01
TREM1-206ENST00000589882 MUC5ACP98088 5654 aa2.49□□□□□ -2.01
TREM1-206ENST00000589882 KRTAP5-8O75690 187 aa2.45□□□□□ -2.02
TREM1-206ENST00000589882 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.03
TREM1-206ENST00000589882 LCE1BQ5T7P3 118 aa2.16□□□□□ -2.06
TREM1-206ENST00000589882 LCE1CQ5T751 118 aa2.14□□□□□ -2.07
TREM1-206ENST00000589882 KRTAP21-2Q3LI59 83 aa2.03□□□□□ -2.08
TREM1-206ENST00000589882 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
TREM1-206ENST00000589882 PHGR1C9JFL3 82 aa1.67□□□□□ -2.14
TREM1-206ENST00000589882 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 67.6 ms