RNA–Protein interactions for RNA: ENST00000589638.1

TMED1-205, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 578 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-205ENST00000589638 SPRR2BP35325 72 aa6.33□□□□□ -1.4
TMED1-205ENST00000589638 SPRR2AP35326 72 aa6.33□□□□□ -1.4
TMED1-205ENST00000589638 SVIPQ8NHG7 77 aa6.33□□□□□ -1.4
TMED1-205ENST00000589638 KRTAP15-1Q3LI76 137 aa6.31□□□□□ -1.4
TMED1-205ENST00000589638 MT1LQ93083 61 aa6.31□□□□□ -1.4
TMED1-205ENST00000589638 LCE1AQ5T7P2 110 aa6.3□□□□□ -1.4
TMED1-205ENST00000589638 NEBP20929 6669 aa6.29□□□□□ -1.4
TMED1-205ENST00000589638 KRTAP19-3Q7Z4W3 81 aa6.29□□□□□ -1.4
TMED1-205ENST00000589638 MT1GP13640 62 aa6.19□□□□□ -1.42
TMED1-205ENST00000589638 LCE5AQ5TCM9 118 aa6.19□□□□□ -1.42
TMED1-205ENST00000589638 MT1MQ8N339 61 aa6.14□□□□□ -1.43
TMED1-205ENST00000589638 SPRR2DP22532 72 aa6.11□□□□□ -1.43
TMED1-205ENST00000589638 KRTAP4-7Q9BYR0 210 aa6.1□□□□□ -1.43
TMED1-205ENST00000589638 LCE3CQ5T5A8 94 aa6.06□□□□□ -1.44
TMED1-205ENST00000589638 KRTAP19-4Q3LI73 84 aa6.05□□□□□ -1.44
TMED1-205ENST00000589638 KRTAP4-3Q9BYR4 195 aa6.02□□□□□ -1.45
TMED1-205ENST00000589638 LCE3BQ5TA77 95 aa5.88□□□□□ -1.47
TMED1-205ENST00000589638 DSTQ03001 7570 aaKnown RBP5.85□□□□□ -1.47
TMED1-205ENST00000589638 KRTAP20-1Q3LI63 56 aa5.83□□□□□ -1.48
TMED1-205ENST00000589638 KRTAP2-3P0C7H8 128 aa5.82□□□□□ -1.48
TMED1-205ENST00000589638 KRTAP2-4Q9BYR9 128 aa5.82□□□□□ -1.48
TMED1-205ENST00000589638 LOC100996750A0A140TA64 210 aa5.74□□□□□ -1.49
TMED1-205ENST00000589638 SPRR5A0A1B0GTR4 108 aa5.73□□□□□ -1.49
TMED1-205ENST00000589638 KRTAP9-6A8MVA2 160 aa5.72□□□□□ -1.49
TMED1-205ENST00000589638 KRTAP2-2Q9BYT5 123 aa5.68□□□□□ -1.5
TMED1-205ENST00000589638 KRTAP2-1Q9BYU5 128 aa5.68□□□□□ -1.5
TMED1-205ENST00000589638 KRTAP5-5Q701N2 237 aaPredicted RBP5.52□□□□□ -1.53
TMED1-205ENST00000589638 LUZP6Q538Z0 58 aa5.44□□□□□ -1.54
TMED1-205ENST00000589638 KRTAP5-4Q6L8H1 288 aa5.4□□□□□ -1.54
TMED1-205ENST00000589638 LCE4AQ5TA78 99 aa5.39□□□□□ -1.55
TMED1-205ENST00000589638 MT1AP04731 61 aa5.37□□□□□ -1.55
TMED1-205ENST00000589638 SYNE1Q8NF91 8797 aaKnown RBP5.34□□□□□ -1.55
TMED1-205ENST00000589638 KRTAP6-1Q3LI64 71 aa5.33□□□□□ -1.56
TMED1-205ENST00000589638 KRTAP4-9Q9BYQ8 210 aa5.33□□□□□ -1.56
TMED1-205ENST00000589638 MT4P47944 62 aa5.32□□□□□ -1.56
TMED1-205ENST00000589638 LCE1DQ5T752 114 aa5.25□□□□□ -1.57
TMED1-205ENST00000589638 KRTAP12-4P60329 112 aa5.23□□□□□ -1.57
TMED1-205ENST00000589638 KRTAP4-6Q9BYQ5 205 aa5.22□□□□□ -1.57
TMED1-205ENST00000589638 HMCN1Q96RW7 5635 aa5.18□□□□□ -1.58
TMED1-205ENST00000589638 NDUFAF8A1L188 74 aa5.12□□□□□ -1.59
TMED1-205ENST00000589638 KRTAP9-4Q9BYQ2 154 aa5.12□□□□□ -1.59
TMED1-205ENST00000589638 KRTAP20-2Q3LI61 65 aa5.09□□□□□ -1.59
TMED1-205ENST00000589638 GPR98Q8WXG9 6306 aa5.05□□□□□ -1.6
TMED1-205ENST00000589638 KRTAP6-2Q3LI66 62 aa4.96□□□□□ -1.62
TMED1-205ENST00000589638 KRTAP5-3Q6L8H2 238 aa4.9□□□□□ -1.63
TMED1-205ENST00000589638 MT3P25713 68 aa4.88□□□□□ -1.63
TMED1-205ENST00000589638 KRTAP5-2Q701N4 177 aa4.85□□□□□ -1.63
TMED1-205ENST00000589638 AHNAK2Q8IVF2 5795 aa4.77□□□□□ -1.65
TMED1-205ENST00000589638 OBSCNQ5VST9 7968 aa4.51□□□□□ -1.69
TMED1-205ENST00000589638 LCE3DQ9BYE3 92 aa4.51□□□□□ -1.69
TMED1-205ENST00000589638 KRTAP5-10Q6L8G5 202 aa4.5□□□□□ -1.69
TMED1-205ENST00000589638 KRTAP4-11Q9BYQ6 195 aa4.47□□□□□ -1.69
TMED1-205ENST00000589638 A0A0A0MQY5 61 aa4.4□□□□□ -1.71
TMED1-205ENST00000589638 LCE3EQ5T5B0 92 aa4.36□□□□□ -1.71
TMED1-205ENST00000589638 KRTAP5-8O75690 187 aa4.31□□□□□ -1.72
TMED1-205ENST00000589638 KRTAP5-7Q6L8G8 165 aa4.27□□□□□ -1.73
TMED1-205ENST00000589638 LCE1EQ5T753 118 aa4.26□□□□□ -1.73
TMED1-205ENST00000589638 KRTAP5-1Q6L8H4 278 aa4.24□□□□□ -1.73
TMED1-205ENST00000589638 MUC5ACP98088 5654 aa4.19□□□□□ -1.74
TMED1-205ENST00000589638 INE1O15225 51 aa4.17□□□□□ -1.74
TMED1-205ENST00000589638 LCE1BQ5T7P3 118 aa4.08□□□□□ -1.76
TMED1-205ENST00000589638 H3BS24 57 aa4.06□□□□□ -1.76
TMED1-205ENST00000589638 KRTAP4-2Q9BYR5 136 aa4.02□□□□□ -1.77
TMED1-205ENST00000589638 LCE1CQ5T751 118 aa3.97□□□□□ -1.77
TMED1-205ENST00000589638 KRTAP9-9Q9BYP9 154 aa3.97□□□□□ -1.77
TMED1-205ENST00000589638 AHNAKQ09666 5890 aaKnown RBP3.84□□□□□ -1.79
TMED1-205ENST00000589638 MUC5BQ9HC84 5762 aaPredicted RBP3.83□□□□□ -1.8
TMED1-205ENST00000589638 PRM1P04553 51 aa3.69□□□□□ -1.82
TMED1-205ENST00000589638 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.68□□□□□ -1.82
TMED1-205ENST00000589638 KRTAP5-11Q6L8G4 156 aa3.54□□□□□ -1.84
TMED1-205ENST00000589638 KRTAP21-2Q3LI59 83 aa3.47□□□□□ -1.85
TMED1-205ENST00000589638 KRTAP4-12Q9BQ66 201 aa3.46□□□□□ -1.86
TMED1-205ENST00000589638 LCE1FQ5T754 118 aa3.25□□□□□ -1.89
TMED1-205ENST00000589638 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
TMED1-205ENST00000589638 PHGR1C9JFL3 82 aa3.04□□□□□ -1.92
TMED1-205ENST00000589638 MUC19Q7Z5P9 8384 aa2.72□□□□□ -1.97
TMED1-205ENST00000589638 KRTAP21-1Q3LI58 79 aa2.16□□□□□ -2.06
TMED1-205ENST00000589638 MUC16Q8WXI7 14507 aa1.93□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 70.8 ms