RNA–Protein interactions for RNA: ENST00000589165.5

ERCC1-208, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ERCC1, Length 1,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-208ENST00000589165 KRTAP2-1Q9BYU5 128 aa5.25□□□□□ -1.57
ERCC1-208ENST00000589165 KRTAP25-1Q3LHN0 102 aa5.23□□□□□ -1.57
ERCC1-208ENST00000589165 KRTAP19-7Q3SYF9 63 aa5.21□□□□□ -1.58
ERCC1-208ENST00000589165 MT1EP04732 61 aa5.16□□□□□ -1.58
ERCC1-208ENST00000589165 LCE3BQ5TA77 95 aa5.16□□□□□ -1.58
ERCC1-208ENST00000589165 LCE5AQ5TCM9 118 aa5.13□□□□□ -1.59
ERCC1-208ENST00000589165 KRTAP19-3Q7Z4W3 81 aa5.11□□□□□ -1.59
ERCC1-208ENST00000589165 TNP1P09430 55 aa5.1□□□□□ -1.59
ERCC1-208ENST00000589165 KRTAP19-5Q3LI72 72 aa5.08□□□□□ -1.6
ERCC1-208ENST00000589165 H3BS24 57 aa5.07□□□□□ -1.6
ERCC1-208ENST00000589165 KRTAP23-1A1A580 65 aa5.04□□□□□ -1.6
ERCC1-208ENST00000589165 PP632Q6XCG6 107 aa5.03□□□□□ -1.6
ERCC1-208ENST00000589165 DSTQ03001 7570 aaKnown RBP5.01□□□□□ -1.61
ERCC1-208ENST00000589165 MT1GP13640 62 aa5□□□□□ -1.61
ERCC1-208ENST00000589165 LCE3AQ5TA76 89 aa5□□□□□ -1.61
ERCC1-208ENST00000589165 MT1LQ93083 61 aa4.94□□□□□ -1.62
ERCC1-208ENST00000589165 MT1MQ8N339 61 aa4.91□□□□□ -1.62
ERCC1-208ENST00000589165 KRTAP12-3P60328 96 aa4.82□□□□□ -1.64
ERCC1-208ENST00000589165 KRTAP4-3Q9BYR4 195 aa4.79□□□□□ -1.64
ERCC1-208ENST00000589165 KRTAP4-9Q9BYQ8 210 aa4.76□□□□□ -1.65
ERCC1-208ENST00000589165 GPR98Q8WXG9 6306 aa4.76□□□□□ -1.65
ERCC1-208ENST00000589165 LCE4AQ5TA78 99 aa4.72□□□□□ -1.65
ERCC1-208ENST00000589165 KRTAP4-7Q9BYR0 210 aa4.71□□□□□ -1.66
ERCC1-208ENST00000589165 HMCN1Q96RW7 5635 aa4.71□□□□□ -1.66
ERCC1-208ENST00000589165 LCE1DQ5T752 114 aa4.69□□□□□ -1.66
ERCC1-208ENST00000589165 KRTAP5-4Q6L8H1 288 aa4.67□□□□□ -1.66
ERCC1-208ENST00000589165 KRTAP15-1Q3LI76 137 aa4.65□□□□□ -1.66
ERCC1-208ENST00000589165 MT4P47944 62 aa4.62□□□□□ -1.67
ERCC1-208ENST00000589165 KRTAP19-4Q3LI73 84 aa4.62□□□□□ -1.67
ERCC1-208ENST00000589165 KRTAP4-6Q9BYQ5 205 aa4.52□□□□□ -1.69
ERCC1-208ENST00000589165 KRTAP5-5Q701N2 237 aaPredicted RBP4.51□□□□□ -1.69
ERCC1-208ENST00000589165 AHNAK2Q8IVF2 5795 aa4.51□□□□□ -1.69
ERCC1-208ENST00000589165 SPRR5A0A1B0GTR4 108 aa4.5□□□□□ -1.69
ERCC1-208ENST00000589165 A0A0A0MQY5 61 aa4.49□□□□□ -1.69
ERCC1-208ENST00000589165 LOC100996750A0A140TA64 210 aa4.45□□□□□ -1.7
ERCC1-208ENST00000589165 LCE3CQ5T5A8 94 aa4.45□□□□□ -1.7
ERCC1-208ENST00000589165 KRTAP20-2Q3LI61 65 aa4.37□□□□□ -1.71
ERCC1-208ENST00000589165 KRTAP12-4P60329 112 aa4.37□□□□□ -1.71
ERCC1-208ENST00000589165 LUZP6Q538Z0 58 aa4.33□□□□□ -1.72
ERCC1-208ENST00000589165 KRTAP5-10Q6L8G5 202 aa4.33□□□□□ -1.72
ERCC1-208ENST00000589165 SYNE1Q8NF91 8797 aaKnown RBP4.33□□□□□ -1.72
ERCC1-208ENST00000589165 NDUFAF8A1L188 74 aa4.28□□□□□ -1.72
ERCC1-208ENST00000589165 KRTAP5-3Q6L8H2 238 aa4.25□□□□□ -1.73
ERCC1-208ENST00000589165 KRTAP9-6A8MVA2 160 aa4.22□□□□□ -1.73
ERCC1-208ENST00000589165 MT1AP04731 61 aa4.21□□□□□ -1.74
ERCC1-208ENST00000589165 KRTAP6-1Q3LI64 71 aa4.18□□□□□ -1.74
ERCC1-208ENST00000589165 KRTAP5-7Q6L8G8 165 aa4.16□□□□□ -1.74
ERCC1-208ENST00000589165 KRTAP5-2Q701N4 177 aa4.1□□□□□ -1.75
ERCC1-208ENST00000589165 KRTAP9-4Q9BYQ2 154 aa4.07□□□□□ -1.76
ERCC1-208ENST00000589165 KRTAP4-11Q9BYQ6 195 aa3.98□□□□□ -1.77
ERCC1-208ENST00000589165 KRTAP6-2Q3LI66 62 aa3.98□□□□□ -1.77
ERCC1-208ENST00000589165 MT3P25713 68 aa3.86□□□□□ -1.79
ERCC1-208ENST00000589165 KRTAP5-8O75690 187 aa3.85□□□□□ -1.79
ERCC1-208ENST00000589165 OBSCNQ5VST9 7968 aa3.83□□□□□ -1.8
ERCC1-208ENST00000589165 AHNAKQ09666 5890 aaKnown RBP3.75□□□□□ -1.81
ERCC1-208ENST00000589165 MUC5BQ9HC84 5762 aaPredicted RBP3.73□□□□□ -1.81
ERCC1-208ENST00000589165 MUC5ACP98088 5654 aa3.7□□□□□ -1.82
ERCC1-208ENST00000589165 KRTAP5-1Q6L8H4 278 aa3.66□□□□□ -1.82
ERCC1-208ENST00000589165 KRTAP9-9Q9BYP9 154 aa3.63□□□□□ -1.83
ERCC1-208ENST00000589165 INE1O15225 51 aa3.61□□□□□ -1.83
ERCC1-208ENST00000589165 LCE1EQ5T753 118 aa3.54□□□□□ -1.84
ERCC1-208ENST00000589165 KRTAP4-2Q9BYR5 136 aa3.32□□□□□ -1.88
ERCC1-208ENST00000589165 LCE3DQ9BYE3 92 aa3.29□□□□□ -1.88
ERCC1-208ENST00000589165 LCE1CQ5T751 118 aa3.28□□□□□ -1.88
ERCC1-208ENST00000589165 LCE1BQ5T7P3 118 aa3.28□□□□□ -1.88
ERCC1-208ENST00000589165 LCE3EQ5T5B0 92 aa3.22□□□□□ -1.89
ERCC1-208ENST00000589165 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.02□□□□□ -1.93
ERCC1-208ENST00000589165 KRTAP5-11Q6L8G4 156 aa2.96□□□□□ -1.93
ERCC1-208ENST00000589165 KRTAP4-12Q9BQ66 201 aa2.96□□□□□ -1.94
ERCC1-208ENST00000589165 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
ERCC1-208ENST00000589165 PRM1P04553 51 aa2.82□□□□□ -1.96
ERCC1-208ENST00000589165 KRTAP21-2Q3LI59 83 aa2.76□□□□□ -1.97
ERCC1-208ENST00000589165 PHGR1C9JFL3 82 aa2.56□□□□□ -2
ERCC1-208ENST00000589165 KRTAP4-4Q9BYR3 166 aa2.52□□□□□ -2.01
ERCC1-208ENST00000589165 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
ERCC1-208ENST00000589165 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
ERCC1-208ENST00000589165 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 272.5 ms