RNA–Protein interactions for RNA: ENST00000588957.5

GFAP-215, Transcript of glial fibrillary acidic protein, humanhuman

TSL 3

Gene GFAP, Length 578 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-215ENST00000588957 KRTAP12-3P60328 96 aa5.27□□□□□ -1.57
GFAP-215ENST00000588957 LCE1AQ5T7P2 110 aa5.24□□□□□ -1.57
GFAP-215ENST00000588957 KRTAP19-4Q3LI73 84 aa5.19□□□□□ -1.58
GFAP-215ENST00000588957 KRTAP20-1Q3LI63 56 aa5.18□□□□□ -1.58
GFAP-215ENST00000588957 KRTAP19-3Q7Z4W3 81 aa5.18□□□□□ -1.58
GFAP-215ENST00000588957 MT1GP13640 62 aa5.16□□□□□ -1.58
GFAP-215ENST00000588957 LCE5AQ5TCM9 118 aa5.12□□□□□ -1.59
GFAP-215ENST00000588957 MT1LQ93083 61 aa5.11□□□□□ -1.59
GFAP-215ENST00000588957 SPRR2DP22532 72 aa5.1□□□□□ -1.59
GFAP-215ENST00000588957 KRTAP15-1Q3LI76 137 aa5.09□□□□□ -1.59
GFAP-215ENST00000588957 KRTAP2-3P0C7H8 128 aa5.03□□□□□ -1.6
GFAP-215ENST00000588957 KRTAP2-4Q9BYR9 128 aa5.03□□□□□ -1.6
GFAP-215ENST00000588957 KTN1-AS1Q86SY8 53 aa5.02□□□□□ -1.61
GFAP-215ENST00000588957 MT1MQ8N339 61 aa4.99□□□□□ -1.61
GFAP-215ENST00000588957 PRAC1Q96KF2 57 aa4.94□□□□□ -1.62
GFAP-215ENST00000588957 LCE3BQ5TA77 95 aa4.93□□□□□ -1.62
GFAP-215ENST00000588957 LOC100996750A0A140TA64 210 aa4.92□□□□□ -1.62
GFAP-215ENST00000588957 KRTAP4-6Q9BYQ5 205 aa4.92□□□□□ -1.62
GFAP-215ENST00000588957 LCE3CQ5T5A8 94 aa4.89□□□□□ -1.63
GFAP-215ENST00000588957 KRTAP2-2Q9BYT5 123 aa4.89□□□□□ -1.63
GFAP-215ENST00000588957 KRTAP2-1Q9BYU5 128 aa4.89□□□□□ -1.63
GFAP-215ENST00000588957 KRTAP4-7Q9BYR0 210 aa4.79□□□□□ -1.64
GFAP-215ENST00000588957 DSTQ03001 7570 aaKnown RBP4.77□□□□□ -1.65
GFAP-215ENST00000588957 SVIPQ8NHG7 77 aa4.76□□□□□ -1.65
GFAP-215ENST00000588957 KRTAP4-3Q9BYR4 195 aa4.75□□□□□ -1.65
GFAP-215ENST00000588957 LCE4AQ5TA78 99 aa4.6□□□□□ -1.67
GFAP-215ENST00000588957 KRTAP5-5Q701N2 237 aaPredicted RBP4.52□□□□□ -1.69
GFAP-215ENST00000588957 KRTAP4-9Q9BYQ8 210 aa4.52□□□□□ -1.69
GFAP-215ENST00000588957 KRTAP5-4Q6L8H1 288 aa4.51□□□□□ -1.69
GFAP-215ENST00000588957 GPR98Q8WXG9 6306 aa4.49□□□□□ -1.69
GFAP-215ENST00000588957 SPRR5A0A1B0GTR4 108 aa4.48□□□□□ -1.69
GFAP-215ENST00000588957 KRTAP9-6A8MVA2 160 aa4.47□□□□□ -1.69
GFAP-215ENST00000588957 HMCN1Q96RW7 5635 aa4.44□□□□□ -1.7
GFAP-215ENST00000588957 KRTAP12-4P60329 112 aa4.43□□□□□ -1.7
GFAP-215ENST00000588957 LCE1DQ5T752 114 aa4.41□□□□□ -1.7
GFAP-215ENST00000588957 MT1AP04731 61 aa4.39□□□□□ -1.71
GFAP-215ENST00000588957 MT4P47944 62 aa4.39□□□□□ -1.71
GFAP-215ENST00000588957 LUZP6Q538Z0 58 aa4.33□□□□□ -1.72
GFAP-215ENST00000588957 KRTAP4-12Q9BQ66 201 aa4.31□□□□□ -1.72
GFAP-215ENST00000588957 AHNAK2Q8IVF2 5795 aa4.27□□□□□ -1.73
GFAP-215ENST00000588957 H3BS24 57 aa4.27□□□□□ -1.73
GFAP-215ENST00000588957 KRTAP6-1Q3LI64 71 aa4.27□□□□□ -1.73
GFAP-215ENST00000588957 KRTAP20-2Q3LI61 65 aa4.23□□□□□ -1.73
GFAP-215ENST00000588957 KRTAP9-4Q9BYQ2 154 aa4.2□□□□□ -1.74
GFAP-215ENST00000588957 KRTAP9-9Q9BYP9 154 aa4.19□□□□□ -1.74
GFAP-215ENST00000588957 SYNE1Q8NF91 8797 aaKnown RBP4.18□□□□□ -1.74
GFAP-215ENST00000588957 KRTAP5-3Q6L8H2 238 aa4.07□□□□□ -1.76
GFAP-215ENST00000588957 MT3P25713 68 aa4.05□□□□□ -1.76
GFAP-215ENST00000588957 KRTAP5-10Q6L8G5 202 aa4.05□□□□□ -1.76
GFAP-215ENST00000588957 KRTAP6-2Q3LI66 62 aa4.02□□□□□ -1.77
GFAP-215ENST00000588957 KRTAP5-2Q701N4 177 aa4.02□□□□□ -1.77
GFAP-215ENST00000588957 KRTAP5-7Q6L8G8 165 aa3.86□□□□□ -1.79
GFAP-215ENST00000588957 KRTAP4-2Q9BYR5 136 aa3.82□□□□□ -1.8
GFAP-215ENST00000588957 NDUFAF8A1L188 74 aa3.78□□□□□ -1.8
GFAP-215ENST00000588957 KRTAP4-11Q9BYQ6 195 aa3.78□□□□□ -1.8
GFAP-215ENST00000588957 OBSCNQ5VST9 7968 aa3.66□□□□□ -1.82
GFAP-215ENST00000588957 LCE3DQ9BYE3 92 aa3.65□□□□□ -1.83
GFAP-215ENST00000588957 LCE1EQ5T753 118 aa3.63□□□□□ -1.83
GFAP-215ENST00000588957 KRTAP5-8O75690 187 aa3.61□□□□□ -1.83
GFAP-215ENST00000588957 A0A0A0MQY5 61 aa3.55□□□□□ -1.84
GFAP-215ENST00000588957 MUC5BQ9HC84 5762 aaPredicted RBP3.51□□□□□ -1.85
GFAP-215ENST00000588957 LCE3EQ5T5B0 92 aa3.51□□□□□ -1.85
GFAP-215ENST00000588957 KRTAP5-1Q6L8H4 278 aa3.51□□□□□ -1.85
GFAP-215ENST00000588957 AHNAKQ09666 5890 aaKnown RBP3.51□□□□□ -1.85
GFAP-215ENST00000588957 MUC5ACP98088 5654 aa3.47□□□□□ -1.85
GFAP-215ENST00000588957 LCE1CQ5T751 118 aa3.34□□□□□ -1.87
GFAP-215ENST00000588957 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.87
GFAP-215ENST00000588957 INE1O15225 51 aa3.24□□□□□ -1.89
GFAP-215ENST00000588957 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.09□□□□□ -1.91
GFAP-215ENST00000588957 KRTAP5-11Q6L8G4 156 aa2.97□□□□□ -1.93
GFAP-215ENST00000588957 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
GFAP-215ENST00000588957 PRM1P04553 51 aa2.82□□□□□ -1.96
GFAP-215ENST00000588957 KRTAP21-2Q3LI59 83 aa2.81□□□□□ -1.96
GFAP-215ENST00000588957 PHGR1C9JFL3 82 aa2.54□□□□□ -2
GFAP-215ENST00000588957 KRTAP4-4Q9BYR3 166 aa2.46□□□□□ -2.02
GFAP-215ENST00000588957 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
GFAP-215ENST00000588957 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
GFAP-215ENST00000588957 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 61.5 ms