RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 PMAIP1Q13794 54 aa7.23□□□□□ -1.25
DNMT1-216ENST00000588952 PRO0628Q9UI54 55 aa7.22□□□□□ -1.25
DNMT1-216ENST00000588952 KRTAP19-3Q7Z4W3 81 aa7.19□□□□□ -1.26
DNMT1-216ENST00000588952 MT1LQ93083 61 aa7.17□□□□□ -1.26
DNMT1-216ENST00000588952 PP632Q6XCG6 107 aa7.16□□□□□ -1.26
DNMT1-216ENST00000588952 LCE5AQ5TCM9 118 aa7.14□□□□□ -1.27
DNMT1-216ENST00000588952 SPRR2DP22532 72 aa7.1□□□□□ -1.27
DNMT1-216ENST00000588952 SVIPQ8NHG7 77 aa7.08□□□□□ -1.28
DNMT1-216ENST00000588952 MT1GP13640 62 aa7.05□□□□□ -1.28
DNMT1-216ENST00000588952 MT1MQ8N339 61 aa7□□□□□ -1.29
DNMT1-216ENST00000588952 KRTAP15-1Q3LI76 137 aa6.97□□□□□ -1.29
DNMT1-216ENST00000588952 KRTAP20-1Q3LI63 56 aa6.96□□□□□ -1.3
DNMT1-216ENST00000588952 PRAC1Q96KF2 57 aa6.93□□□□□ -1.3
DNMT1-216ENST00000588952 KRTAP2-3P0C7H8 128 aa6.91□□□□□ -1.3
DNMT1-216ENST00000588952 KRTAP2-4Q9BYR9 128 aa6.91□□□□□ -1.3
DNMT1-216ENST00000588952 KRTAP4-7Q9BYR0 210 aa6.9□□□□□ -1.3
DNMT1-216ENST00000588952 KRTAP4-3Q9BYR4 195 aa6.88□□□□□ -1.31
DNMT1-216ENST00000588952 LCE3BQ5TA77 95 aa6.86□□□□□ -1.31
DNMT1-216ENST00000588952 KTN1-AS1Q86SY8 53 aa6.77□□□□□ -1.33
DNMT1-216ENST00000588952 KRTAP19-4Q3LI73 84 aa6.76□□□□□ -1.33
DNMT1-216ENST00000588952 LCE3CQ5T5A8 94 aa6.74□□□□□ -1.33
DNMT1-216ENST00000588952 KRTAP2-2Q9BYT5 123 aa6.73□□□□□ -1.33
DNMT1-216ENST00000588952 KRTAP2-1Q9BYU5 128 aa6.73□□□□□ -1.33
DNMT1-216ENST00000588952 DSTQ03001 7570 aaKnown RBP6.67□□□□□ -1.34
DNMT1-216ENST00000588952 LOC100996750A0A140TA64 210 aa6.51□□□□□ -1.37
DNMT1-216ENST00000588952 KRTAP9-6A8MVA2 160 aa6.43□□□□□ -1.38
DNMT1-216ENST00000588952 KRTAP5-5Q701N2 237 aaPredicted RBP6.38□□□□□ -1.39
DNMT1-216ENST00000588952 KRTAP5-4Q6L8H1 288 aa6.33□□□□□ -1.4
DNMT1-216ENST00000588952 LCE4AQ5TA78 99 aa6.29□□□□□ -1.4
DNMT1-216ENST00000588952 KRTAP4-9Q9BYQ8 210 aa6.27□□□□□ -1.41
DNMT1-216ENST00000588952 SPRR5A0A1B0GTR4 108 aa6.2□□□□□ -1.42
DNMT1-216ENST00000588952 MT4P47944 62 aa6.19□□□□□ -1.42
DNMT1-216ENST00000588952 LCE1DQ5T752 114 aa6.18□□□□□ -1.42
DNMT1-216ENST00000588952 KRTAP4-6Q9BYQ5 205 aa6.11□□□□□ -1.43
DNMT1-216ENST00000588952 MT1AP04731 61 aa6.09□□□□□ -1.43
DNMT1-216ENST00000588952 KRTAP6-1Q3LI64 71 aa6.06□□□□□ -1.44
DNMT1-216ENST00000588952 HMCN1Q96RW7 5635 aa6.05□□□□□ -1.44
DNMT1-216ENST00000588952 SYNE1Q8NF91 8797 aaKnown RBP5.99□□□□□ -1.45
DNMT1-216ENST00000588952 KRTAP12-4P60329 112 aa5.98□□□□□ -1.45
DNMT1-216ENST00000588952 KRTAP20-2Q3LI61 65 aa5.94□□□□□ -1.46
DNMT1-216ENST00000588952 KRTAP9-4Q9BYQ2 154 aa5.82□□□□□ -1.48
DNMT1-216ENST00000588952 A0A0A0MQY5 61 aa5.78□□□□□ -1.48
DNMT1-216ENST00000588952 KRTAP5-3Q6L8H2 238 aa5.75□□□□□ -1.49
DNMT1-216ENST00000588952 KRTAP6-2Q3LI66 62 aa5.66□□□□□ -1.5
DNMT1-216ENST00000588952 KRTAP5-2Q701N4 177 aa5.66□□□□□ -1.5
DNMT1-216ENST00000588952 AHNAK2Q8IVF2 5795 aa5.63□□□□□ -1.51
DNMT1-216ENST00000588952 LUZP6Q538Z0 58 aa5.6□□□□□ -1.51
DNMT1-216ENST00000588952 MT3P25713 68 aa5.51□□□□□ -1.53
DNMT1-216ENST00000588952 GPR98Q8WXG9 6306 aa5.46□□□□□ -1.54
DNMT1-216ENST00000588952 KRTAP5-10Q6L8G5 202 aa5.45□□□□□ -1.54
DNMT1-216ENST00000588952 KRTAP4-12Q9BQ66 201 aa5.38□□□□□ -1.55
DNMT1-216ENST00000588952 KRTAP4-11Q9BYQ6 195 aa5.26□□□□□ -1.57
DNMT1-216ENST00000588952 NDUFAF8A1L188 74 aa5.16□□□□□ -1.58
DNMT1-216ENST00000588952 KRTAP5-7Q6L8G8 165 aa5.13□□□□□ -1.59
DNMT1-216ENST00000588952 KRTAP5-8O75690 187 aa5.09□□□□□ -1.59
DNMT1-216ENST00000588952 KRTAP9-9Q9BYP9 154 aa5.05□□□□□ -1.6
DNMT1-216ENST00000588952 OBSCNQ5VST9 7968 aa5.01□□□□□ -1.61
DNMT1-216ENST00000588952 KRTAP5-1Q6L8H4 278 aa4.97□□□□□ -1.61
DNMT1-216ENST00000588952 LCE3DQ9BYE3 92 aa4.95□□□□□ -1.62
DNMT1-216ENST00000588952 LCE1EQ5T753 118 aa4.91□□□□□ -1.62
DNMT1-216ENST00000588952 MUC5ACP98088 5654 aa4.8□□□□□ -1.64
DNMT1-216ENST00000588952 LCE3EQ5T5B0 92 aa4.76□□□□□ -1.65
DNMT1-216ENST00000588952 KRTAP4-2Q9BYR5 136 aa4.66□□□□□ -1.66
DNMT1-216ENST00000588952 LCE1BQ5T7P3 118 aa4.62□□□□□ -1.67
DNMT1-216ENST00000588952 LCE1CQ5T751 118 aa4.57□□□□□ -1.68
DNMT1-216ENST00000588952 MUC5BQ9HC84 5762 aaPredicted RBP4.53□□□□□ -1.68
DNMT1-216ENST00000588952 AHNAKQ09666 5890 aaKnown RBP4.41□□□□□ -1.7
DNMT1-216ENST00000588952 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.24□□□□□ -1.73
DNMT1-216ENST00000588952 INE1O15225 51 aa4.18□□□□□ -1.74
DNMT1-216ENST00000588952 KRTAP5-11Q6L8G4 156 aa4.1□□□□□ -1.75
DNMT1-216ENST00000588952 KRTAP21-2Q3LI59 83 aa3.98□□□□□ -1.77
DNMT1-216ENST00000588952 PRM1P04553 51 aa3.94□□□□□ -1.78
DNMT1-216ENST00000588952 LCE1FQ5T754 118 aa3.8□□□□□ -1.8
DNMT1-216ENST00000588952 KRTAP4-4Q9BYR3 166 aa3.59□□□□□ -1.83
DNMT1-216ENST00000588952 PHGR1C9JFL3 82 aa3.53□□□□□ -1.84
DNMT1-216ENST00000588952 MUC19Q7Z5P9 8384 aa3.05□□□□□ -1.92
DNMT1-216ENST00000588952 KRTAP21-1Q3LI58 79 aa2.33□□□□□ -2.04
DNMT1-216ENST00000588952 MUC16Q8WXI7 14507 aa2.27□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 63.8 ms