RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 SPRR2DP22532 72 aa6.87□□□□□ -1.31
CLPTM1-209ENST00000588855 KRTAP19-3Q7Z4W3 81 aa6.86□□□□□ -1.31
CLPTM1-209ENST00000588855 KRTAP12-3P60328 96 aa6.83□□□□□ -1.32
CLPTM1-209ENST00000588855 KRTAP20-1Q3LI63 56 aa6.83□□□□□ -1.32
CLPTM1-209ENST00000588855 LCE5AQ5TCM9 118 aa6.82□□□□□ -1.32
CLPTM1-209ENST00000588855 KRTAP23-1A1A580 65 aa6.81□□□□□ -1.32
CLPTM1-209ENST00000588855 MT1LQ93083 61 aa6.78□□□□□ -1.32
CLPTM1-209ENST00000588855 KRTAP2-3P0C7H8 128 aa6.76□□□□□ -1.33
CLPTM1-209ENST00000588855 KRTAP2-4Q9BYR9 128 aa6.76□□□□□ -1.33
CLPTM1-209ENST00000588855 MT1GP13640 62 aa6.74□□□□□ -1.33
CLPTM1-209ENST00000588855 KTN1-AS1Q86SY8 53 aa6.69□□□□□ -1.34
CLPTM1-209ENST00000588855 PP632Q6XCG6 107 aa6.66□□□□□ -1.34
CLPTM1-209ENST00000588855 MT1MQ8N339 61 aa6.66□□□□□ -1.34
CLPTM1-209ENST00000588855 LCE3BQ5TA77 95 aa6.65□□□□□ -1.35
CLPTM1-209ENST00000588855 DSTQ03001 7570 aaKnown RBP6.63□□□□□ -1.35
CLPTM1-209ENST00000588855 KRTAP2-2Q9BYT5 123 aa6.57□□□□□ -1.36
CLPTM1-209ENST00000588855 KRTAP2-1Q9BYU5 128 aa6.57□□□□□ -1.36
CLPTM1-209ENST00000588855 KRTAP15-1Q3LI76 137 aa6.52□□□□□ -1.37
CLPTM1-209ENST00000588855 KRTAP4-3Q9BYR4 195 aa6.51□□□□□ -1.37
CLPTM1-209ENST00000588855 KRTAP4-7Q9BYR0 210 aa6.5□□□□□ -1.37
CLPTM1-209ENST00000588855 KRTAP19-4Q3LI73 84 aa6.4□□□□□ -1.39
CLPTM1-209ENST00000588855 LCE3CQ5T5A8 94 aa6.32□□□□□ -1.4
CLPTM1-209ENST00000588855 PRAC1Q96KF2 57 aa6.23□□□□□ -1.41
CLPTM1-209ENST00000588855 LOC100996750A0A140TA64 210 aa6.14□□□□□ -1.43
CLPTM1-209ENST00000588855 KRTAP4-9Q9BYQ8 210 aa6.09□□□□□ -1.44
CLPTM1-209ENST00000588855 LCE4AQ5TA78 99 aa6.08□□□□□ -1.44
CLPTM1-209ENST00000588855 KRTAP5-4Q6L8H1 288 aa6.07□□□□□ -1.44
CLPTM1-209ENST00000588855 KRTAP5-5Q701N2 237 aaPredicted RBP6.06□□□□□ -1.44
CLPTM1-209ENST00000588855 KRTAP9-6A8MVA2 160 aa5.99□□□□□ -1.45
CLPTM1-209ENST00000588855 H3BS24 57 aa5.99□□□□□ -1.45
CLPTM1-209ENST00000588855 LCE1DQ5T752 114 aa5.99□□□□□ -1.45
CLPTM1-209ENST00000588855 MT4P47944 62 aa5.99□□□□□ -1.45
CLPTM1-209ENST00000588855 HMCN1Q96RW7 5635 aa5.98□□□□□ -1.45
CLPTM1-209ENST00000588855 KRTAP4-6Q9BYQ5 205 aa5.87□□□□□ -1.47
CLPTM1-209ENST00000588855 SYNE1Q8NF91 8797 aaKnown RBP5.87□□□□□ -1.47
CLPTM1-209ENST00000588855 MT1AP04731 61 aa5.78□□□□□ -1.48
CLPTM1-209ENST00000588855 KRTAP12-4P60329 112 aa5.75□□□□□ -1.49
CLPTM1-209ENST00000588855 KRTAP6-1Q3LI64 71 aa5.74□□□□□ -1.49
CLPTM1-209ENST00000588855 KRTAP20-2Q3LI61 65 aa5.71□□□□□ -1.5
CLPTM1-209ENST00000588855 SPRR5A0A1B0GTR4 108 aa5.7□□□□□ -1.5
CLPTM1-209ENST00000588855 AHNAK2Q8IVF2 5795 aa5.59□□□□□ -1.51
CLPTM1-209ENST00000588855 GPR98Q8WXG9 6306 aa5.55□□□□□ -1.52
CLPTM1-209ENST00000588855 KRTAP5-3Q6L8H2 238 aa5.53□□□□□ -1.52
CLPTM1-209ENST00000588855 KRTAP9-4Q9BYQ2 154 aa5.53□□□□□ -1.52
CLPTM1-209ENST00000588855 KRTAP5-2Q701N4 177 aa5.41□□□□□ -1.54
CLPTM1-209ENST00000588855 KRTAP6-2Q3LI66 62 aa5.38□□□□□ -1.55
CLPTM1-209ENST00000588855 KRTAP5-10Q6L8G5 202 aa5.33□□□□□ -1.56
CLPTM1-209ENST00000588855 NDUFAF8A1L188 74 aa5.28□□□□□ -1.56
CLPTM1-209ENST00000588855 MT3P25713 68 aa5.24□□□□□ -1.57
CLPTM1-209ENST00000588855 OBSCNQ5VST9 7968 aa5.13□□□□□ -1.59
CLPTM1-209ENST00000588855 LUZP6Q538Z0 58 aa5.12□□□□□ -1.59
CLPTM1-209ENST00000588855 KRTAP4-11Q9BYQ6 195 aa5.09□□□□□ -1.59
CLPTM1-209ENST00000588855 A0A0A0MQY5 61 aa5.07□□□□□ -1.6
CLPTM1-209ENST00000588855 KRTAP5-7Q6L8G8 165 aa5.05□□□□□ -1.6
CLPTM1-209ENST00000588855 KRTAP5-8O75690 187 aa4.92□□□□□ -1.62
CLPTM1-209ENST00000588855 KRTAP5-1Q6L8H4 278 aa4.77□□□□□ -1.65
CLPTM1-209ENST00000588855 MUC5ACP98088 5654 aa4.72□□□□□ -1.65
CLPTM1-209ENST00000588855 LCE1EQ5T753 118 aa4.69□□□□□ -1.66
CLPTM1-209ENST00000588855 LCE3DQ9BYE3 92 aa4.65□□□□□ -1.67
CLPTM1-209ENST00000588855 INE1O15225 51 aa4.57□□□□□ -1.68
CLPTM1-209ENST00000588855 KRTAP9-9Q9BYP9 154 aa4.56□□□□□ -1.68
CLPTM1-209ENST00000588855 MUC5BQ9HC84 5762 aaPredicted RBP4.56□□□□□ -1.68
CLPTM1-209ENST00000588855 AHNAKQ09666 5890 aaKnown RBP4.45□□□□□ -1.7
CLPTM1-209ENST00000588855 LCE3EQ5T5B0 92 aa4.44□□□□□ -1.7
CLPTM1-209ENST00000588855 KRTAP4-2Q9BYR5 136 aa4.43□□□□□ -1.7
CLPTM1-209ENST00000588855 LCE1BQ5T7P3 118 aa4.42□□□□□ -1.7
CLPTM1-209ENST00000588855 LCE1CQ5T751 118 aa4.37□□□□□ -1.71
CLPTM1-209ENST00000588855 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.03□□□□□ -1.76
CLPTM1-209ENST00000588855 KRTAP5-11Q6L8G4 156 aa3.92□□□□□ -1.78
CLPTM1-209ENST00000588855 KRTAP4-12Q9BQ66 201 aa3.86□□□□□ -1.79
CLPTM1-209ENST00000588855 KRTAP21-2Q3LI59 83 aa3.76□□□□□ -1.81
CLPTM1-209ENST00000588855 LCE1FQ5T754 118 aa3.69□□□□□ -1.82
CLPTM1-209ENST00000588855 PRM1P04553 51 aa3.61□□□□□ -1.83
CLPTM1-209ENST00000588855 KRTAP4-4Q9BYR3 166 aa3.4□□□□□ -1.86
CLPTM1-209ENST00000588855 PHGR1C9JFL3 82 aa3.38□□□□□ -1.87
CLPTM1-209ENST00000588855 MUC19Q7Z5P9 8384 aa3.12□□□□□ -1.91
CLPTM1-209ENST00000588855 KRTAP21-1Q3LI58 79 aa2.31□□□□□ -2.04
CLPTM1-209ENST00000588855 MUC16Q8WXI7 14507 aa2.2□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 123.8 ms