RNA–Protein interactions for RNA: ENST00000588269.1

PRKCSH-207, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-207ENST00000588269 PP632Q6XCG6 107 aa4.3□□□□□ -1.72
PRKCSH-207ENST00000588269 C10orf95Q9H7T3 257 aa4.3□□□□□ -1.72
PRKCSH-207ENST00000588269 Q1T7F1 81 aa4.26□□□□□ -1.73
PRKCSH-207ENST00000588269 LCE3AQ5TA76 89 aa4.25□□□□□ -1.73
PRKCSH-207ENST00000588269 PSPHP1O15172 72 aa4.24□□□□□ -1.73
PRKCSH-207ENST00000588269 MT1GP13640 62 aa4.24□□□□□ -1.73
PRKCSH-207ENST00000588269 LCE1DQ5T752 114 aa4.21□□□□□ -1.74
PRKCSH-207ENST00000588269 KRTAP25-1Q3LHN0 102 aa4.2□□□□□ -1.74
PRKCSH-207ENST00000588269 A6NED7 52 aa4.17□□□□□ -1.74
PRKCSH-207ENST00000588269 MT1LQ93083 61 aa4.17□□□□□ -1.74
PRKCSH-207ENST00000588269 MT4P47944 62 aa4.16□□□□□ -1.74
PRKCSH-207ENST00000588269 KRTAP12-3P60328 96 aa4.14□□□□□ -1.75
PRKCSH-207ENST00000588269 MT1MQ8N339 61 aa4.14□□□□□ -1.75
PRKCSH-207ENST00000588269 CDC42SE1Q9NRR8 79 aa4.07□□□□□ -1.76
PRKCSH-207ENST00000588269 LCE4AQ5TA78 99 aa4.05□□□□□ -1.76
PRKCSH-207ENST00000588269 KRTAP23-1A1A580 65 aa4.04□□□□□ -1.76
PRKCSH-207ENST00000588269 KRTAP4-3Q9BYR4 195 aa4.04□□□□□ -1.76
PRKCSH-207ENST00000588269 KRTAP5-10Q6L8G5 202 aa4.03□□□□□ -1.76
PRKCSH-207ENST00000588269 KRTAP4-6Q9BYQ5 205 aa4.02□□□□□ -1.77
PRKCSH-207ENST00000588269 HMCN1Q96RW7 5635 aa4□□□□□ -1.77
PRKCSH-207ENST00000588269 AHNAK2Q8IVF2 5795 aa4□□□□□ -1.77
PRKCSH-207ENST00000588269 KRTAP19-4Q3LI73 84 aa3.99□□□□□ -1.77
PRKCSH-207ENST00000588269 ROMO1P60602 79 aa3.96□□□□□ -1.78
PRKCSH-207ENST00000588269 KRTAP5-4Q6L8H1 288 aa3.96□□□□□ -1.78
PRKCSH-207ENST00000588269 KRTAP15-1Q3LI76 137 aa3.89□□□□□ -1.79
PRKCSH-207ENST00000588269 BRK1Q8WUW1 75 aa3.89□□□□□ -1.79
PRKCSH-207ENST00000588269 KRTAP4-7Q9BYR0 210 aa3.89□□□□□ -1.79
PRKCSH-207ENST00000588269 KRTAP5-7Q6L8G8 165 aa3.88□□□□□ -1.79
PRKCSH-207ENST00000588269 KRTAP5-3Q6L8H2 238 aa3.88□□□□□ -1.79
PRKCSH-207ENST00000588269 LCE3CQ5T5A8 94 aa3.79□□□□□ -1.8
PRKCSH-207ENST00000588269 SPRR5A0A1B0GTR4 108 aa3.78□□□□□ -1.8
PRKCSH-207ENST00000588269 KRTAP20-2Q3LI61 65 aa3.78□□□□□ -1.8
PRKCSH-207ENST00000588269 KRTAP5-5Q701N2 237 aaPredicted RBP3.77□□□□□ -1.81
PRKCSH-207ENST00000588269 KRTAP12-4P60329 112 aa3.76□□□□□ -1.81
PRKCSH-207ENST00000588269 PRO0628Q9UI54 55 aa3.75□□□□□ -1.81
PRKCSH-207ENST00000588269 LOC100996750A0A140TA64 210 aa3.69□□□□□ -1.82
PRKCSH-207ENST00000588269 PMAIP1Q13794 54 aa3.67□□□□□ -1.82
PRKCSH-207ENST00000588269 SYNE1Q8NF91 8797 aaKnown RBP3.59□□□□□ -1.84
PRKCSH-207ENST00000588269 MT1AP04731 61 aa3.58□□□□□ -1.84
PRKCSH-207ENST00000588269 KRTAP4-11Q9BYQ6 195 aa3.51□□□□□ -1.85
PRKCSH-207ENST00000588269 KTN1-AS1Q86SY8 53 aa3.5□□□□□ -1.85
PRKCSH-207ENST00000588269 SVIPQ8NHG7 77 aa3.5□□□□□ -1.85
PRKCSH-207ENST00000588269 KRTAP6-1Q3LI64 71 aa3.49□□□□□ -1.85
PRKCSH-207ENST00000588269 KRTAP9-6A8MVA2 160 aa3.48□□□□□ -1.85
PRKCSH-207ENST00000588269 AHNAKQ09666 5890 aaKnown RBP3.43□□□□□ -1.86
PRKCSH-207ENST00000588269 KRTAP5-8O75690 187 aa3.43□□□□□ -1.86
PRKCSH-207ENST00000588269 KRTAP5-2Q701N4 177 aa3.42□□□□□ -1.86
PRKCSH-207ENST00000588269 PRAC1Q96KF2 57 aa3.42□□□□□ -1.86
PRKCSH-207ENST00000588269 KRTAP9-4Q9BYQ2 154 aa3.42□□□□□ -1.86
PRKCSH-207ENST00000588269 KRTAP6-2Q3LI66 62 aa3.35□□□□□ -1.87
PRKCSH-207ENST00000588269 MUC5ACP98088 5654 aa3.31□□□□□ -1.88
PRKCSH-207ENST00000588269 MT3P25713 68 aa3.3□□□□□ -1.88
PRKCSH-207ENST00000588269 MUC5BQ9HC84 5762 aaPredicted RBP3.29□□□□□ -1.88
PRKCSH-207ENST00000588269 KRTAP9-9Q9BYP9 154 aa3.24□□□□□ -1.89
PRKCSH-207ENST00000588269 OBSCNQ5VST9 7968 aa3.24□□□□□ -1.89
PRKCSH-207ENST00000588269 KRTAP5-1Q6L8H4 278 aa3.14□□□□□ -1.91
PRKCSH-207ENST00000588269 LCE1EQ5T753 118 aa3.01□□□□□ -1.93
PRKCSH-207ENST00000588269 LUZP6Q538Z0 58 aa2.88□□□□□ -1.95
PRKCSH-207ENST00000588269 LCE1BQ5T7P3 118 aa2.8□□□□□ -1.96
PRKCSH-207ENST00000588269 KRTAP4-2Q9BYR5 136 aa2.79□□□□□ -1.96
PRKCSH-207ENST00000588269 LCE1CQ5T751 118 aa2.78□□□□□ -1.96
PRKCSH-207ENST00000588269 LCE3DQ9BYE3 92 aa2.77□□□□□ -1.97
PRKCSH-207ENST00000588269 KRTAP4-12Q9BQ66 201 aa2.69□□□□□ -1.98
PRKCSH-207ENST00000588269 NDUFAF8A1L188 74 aa2.67□□□□□ -1.98
PRKCSH-207ENST00000588269 LCE3EQ5T5B0 92 aa2.63□□□□□ -1.99
PRKCSH-207ENST00000588269 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.53□□□□□ -2
PRKCSH-207ENST00000588269 KRTAP5-11Q6L8G4 156 aa2.52□□□□□ -2.01
PRKCSH-207ENST00000588269 LCE1FQ5T754 118 aa2.45□□□□□ -2.02
PRKCSH-207ENST00000588269 H3BS24 57 aa2.43□□□□□ -2.02
PRKCSH-207ENST00000588269 PHGR1C9JFL3 82 aa2.37□□□□□ -2.03
PRKCSH-207ENST00000588269 A0A0A0MQY5 61 aa2.36□□□□□ -2.03
PRKCSH-207ENST00000588269 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
PRKCSH-207ENST00000588269 INE1O15225 51 aa2.24□□□□□ -2.05
PRKCSH-207ENST00000588269 KRTAP4-4Q9BYR3 166 aa2.17□□□□□ -2.06
PRKCSH-207ENST00000588269 MUC19Q7Z5P9 8384 aa2.01□□□□□ -2.09
PRKCSH-207ENST00000588269 PRM1P04553 51 aa1.99□□□□□ -2.09
PRKCSH-207ENST00000588269 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
PRKCSH-207ENST00000588269 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 126.3 ms