RNA–Protein interactions for RNA: ENST00000588170.5

GRN-212, Transcript of granulin precursor, humanhuman

TSL 2

Gene GRN, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-212ENST00000588170 PRO0628Q9UI54 55 aa5.5□□□□□ -1.53
GRN-212ENST00000588170 KRTAP19-3Q7Z4W3 81 aa5.49□□□□□ -1.53
GRN-212ENST00000588170 LCE5AQ5TCM9 118 aa5.48□□□□□ -1.53
GRN-212ENST00000588170 BRK1Q8WUW1 75 aa5.48□□□□□ -1.53
GRN-212ENST00000588170 SVIPQ8NHG7 77 aa5.42□□□□□ -1.54
GRN-212ENST00000588170 CDC42SE1Q9NRR8 79 aa5.41□□□□□ -1.54
GRN-212ENST00000588170 DSTQ03001 7570 aaKnown RBP5.41□□□□□ -1.54
GRN-212ENST00000588170 KRTAP25-1Q3LHN0 102 aa5.4□□□□□ -1.54
GRN-212ENST00000588170 MT1LQ93083 61 aa5.39□□□□□ -1.55
GRN-212ENST00000588170 MT1GP13640 62 aa5.38□□□□□ -1.55
GRN-212ENST00000588170 KRTAP12-3P60328 96 aa5.33□□□□□ -1.56
GRN-212ENST00000588170 MT1MQ8N339 61 aa5.31□□□□□ -1.56
GRN-212ENST00000588170 PP632Q6XCG6 107 aa5.28□□□□□ -1.56
GRN-212ENST00000588170 KRTAP4-3Q9BYR4 195 aa5.26□□□□□ -1.57
GRN-212ENST00000588170 ROMO1P60602 79 aa5.23□□□□□ -1.57
GRN-212ENST00000588170 PMAIP1Q13794 54 aa5.22□□□□□ -1.57
GRN-212ENST00000588170 KRTAP23-1A1A580 65 aa5.2□□□□□ -1.58
GRN-212ENST00000588170 KRTAP4-7Q9BYR0 210 aa5.2□□□□□ -1.58
GRN-212ENST00000588170 KRTAP4-9Q9BYQ8 210 aa5.12□□□□□ -1.59
GRN-212ENST00000588170 KRTAP15-1Q3LI76 137 aa5.06□□□□□ -1.6
GRN-212ENST00000588170 GPR98Q8WXG9 6306 aa5.05□□□□□ -1.6
GRN-212ENST00000588170 KTN1-AS1Q86SY8 53 aa5.05□□□□□ -1.6
GRN-212ENST00000588170 LCE4AQ5TA78 99 aa5□□□□□ -1.61
GRN-212ENST00000588170 LCE1DQ5T752 114 aa4.98□□□□□ -1.61
GRN-212ENST00000588170 KRTAP19-4Q3LI73 84 aa4.96□□□□□ -1.62
GRN-212ENST00000588170 LCE3CQ5T5A8 94 aa4.95□□□□□ -1.62
GRN-212ENST00000588170 MT4P47944 62 aa4.94□□□□□ -1.62
GRN-212ENST00000588170 KRTAP5-4Q6L8H1 288 aa4.93□□□□□ -1.62
GRN-212ENST00000588170 LOC100996750A0A140TA64 210 aa4.92□□□□□ -1.62
GRN-212ENST00000588170 HMCN1Q96RW7 5635 aa4.92□□□□□ -1.62
GRN-212ENST00000588170 KRTAP5-5Q701N2 237 aaPredicted RBP4.85□□□□□ -1.63
GRN-212ENST00000588170 PRAC1Q96KF2 57 aa4.84□□□□□ -1.63
GRN-212ENST00000588170 KRTAP4-6Q9BYQ5 205 aa4.82□□□□□ -1.64
GRN-212ENST00000588170 AHNAK2Q8IVF2 5795 aa4.72□□□□□ -1.65
GRN-212ENST00000588170 KRTAP9-6A8MVA2 160 aa4.72□□□□□ -1.65
GRN-212ENST00000588170 KRTAP5-10Q6L8G5 202 aa4.67□□□□□ -1.66
GRN-212ENST00000588170 SYNE1Q8NF91 8797 aaKnown RBP4.65□□□□□ -1.67
GRN-212ENST00000588170 KRTAP20-2Q3LI61 65 aa4.64□□□□□ -1.67
GRN-212ENST00000588170 KRTAP12-4P60329 112 aa4.63□□□□□ -1.67
GRN-212ENST00000588170 SPRR5A0A1B0GTR4 108 aa4.61□□□□□ -1.67
GRN-212ENST00000588170 MT1AP04731 61 aa4.57□□□□□ -1.68
GRN-212ENST00000588170 KRTAP6-1Q3LI64 71 aa4.57□□□□□ -1.68
GRN-212ENST00000588170 KRTAP5-3Q6L8H2 238 aa4.56□□□□□ -1.68
GRN-212ENST00000588170 KRTAP5-7Q6L8G8 165 aa4.52□□□□□ -1.69
GRN-212ENST00000588170 KRTAP9-4Q9BYQ2 154 aa4.42□□□□□ -1.7
GRN-212ENST00000588170 KRTAP5-2Q701N4 177 aa4.36□□□□□ -1.71
GRN-212ENST00000588170 KRTAP6-2Q3LI66 62 aa4.32□□□□□ -1.72
GRN-212ENST00000588170 KRTAP4-11Q9BYQ6 195 aa4.22□□□□□ -1.73
GRN-212ENST00000588170 MT3P25713 68 aa4.16□□□□□ -1.74
GRN-212ENST00000588170 OBSCNQ5VST9 7968 aa4.14□□□□□ -1.75
GRN-212ENST00000588170 KRTAP5-8O75690 187 aa4.06□□□□□ -1.76
GRN-212ENST00000588170 NDUFAF8A1L188 74 aa3.93□□□□□ -1.78
GRN-212ENST00000588170 KRTAP9-9Q9BYP9 154 aa3.92□□□□□ -1.78
GRN-212ENST00000588170 LUZP6Q538Z0 58 aa3.91□□□□□ -1.78
GRN-212ENST00000588170 AHNAKQ09666 5890 aaKnown RBP3.89□□□□□ -1.79
GRN-212ENST00000588170 MUC5ACP98088 5654 aa3.89□□□□□ -1.79
GRN-212ENST00000588170 KRTAP5-1Q6L8H4 278 aa3.88□□□□□ -1.79
GRN-212ENST00000588170 MUC5BQ9HC84 5762 aaPredicted RBP3.87□□□□□ -1.79
GRN-212ENST00000588170 LCE1EQ5T753 118 aa3.75□□□□□ -1.81
GRN-212ENST00000588170 H3BS24 57 aa3.69□□□□□ -1.82
GRN-212ENST00000588170 LCE3DQ9BYE3 92 aa3.6□□□□□ -1.83
GRN-212ENST00000588170 KRTAP4-2Q9BYR5 136 aa3.57□□□□□ -1.84
GRN-212ENST00000588170 LCE1BQ5T7P3 118 aa3.56□□□□□ -1.84
GRN-212ENST00000588170 A0A0A0MQY5 61 aa3.5□□□□□ -1.85
GRN-212ENST00000588170 LCE1CQ5T751 118 aa3.5□□□□□ -1.85
GRN-212ENST00000588170 LCE3EQ5T5B0 92 aa3.42□□□□□ -1.86
GRN-212ENST00000588170 INE1O15225 51 aa3.3□□□□□ -1.88
GRN-212ENST00000588170 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.2□□□□□ -1.9
GRN-212ENST00000588170 KRTAP4-12Q9BQ66 201 aa3.19□□□□□ -1.9
GRN-212ENST00000588170 KRTAP5-11Q6L8G4 156 aa3.13□□□□□ -1.91
GRN-212ENST00000588170 LCE1FQ5T754 118 aa3.02□□□□□ -1.93
GRN-212ENST00000588170 KRTAP21-2Q3LI59 83 aa3.01□□□□□ -1.93
GRN-212ENST00000588170 KRTAP4-4Q9BYR3 166 aa2.76□□□□□ -1.97
GRN-212ENST00000588170 PHGR1C9JFL3 82 aa2.75□□□□□ -1.97
GRN-212ENST00000588170 PRM1P04553 51 aa2.71□□□□□ -1.98
GRN-212ENST00000588170 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
GRN-212ENST00000588170 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
GRN-212ENST00000588170 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 1321.7 ms