RNA–Protein interactions for RNA: ENST00000588138.1

ATP6V0A1-217, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 5

Gene ATP6V0A1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-217ENST00000588138 KRTAP19-5Q3LI72 72 aa4.42□□□□□ -1.7
ATP6V0A1-217ENST00000588138 SPRR2EP22531 72 aa4.4□□□□□ -1.71
ATP6V0A1-217ENST00000588138 SPRR2BP35325 72 aa4.4□□□□□ -1.71
ATP6V0A1-217ENST00000588138 SPRR2AP35326 72 aa4.4□□□□□ -1.71
ATP6V0A1-217ENST00000588138 KRTAP12-3P60328 96 aa4.4□□□□□ -1.71
ATP6V0A1-217ENST00000588138 KRTAP19-7Q3SYF9 63 aa4.4□□□□□ -1.71
ATP6V0A1-217ENST00000588138 KRTAP2-3P0C7H8 128 aa4.37□□□□□ -1.71
ATP6V0A1-217ENST00000588138 KRTAP2-4Q9BYR9 128 aa4.37□□□□□ -1.71
ATP6V0A1-217ENST00000588138 MT1EP04732 61 aa4.34□□□□□ -1.71
ATP6V0A1-217ENST00000588138 LCE1AQ5T7P2 110 aa4.34□□□□□ -1.71
ATP6V0A1-217ENST00000588138 KRTAP15-1Q3LI76 137 aa4.29□□□□□ -1.72
ATP6V0A1-217ENST00000588138 SPRR2DP22532 72 aa4.25□□□□□ -1.73
ATP6V0A1-217ENST00000588138 MT1LQ93083 61 aa4.23□□□□□ -1.73
ATP6V0A1-217ENST00000588138 KRTAP19-3Q7Z4W3 81 aa4.22□□□□□ -1.73
ATP6V0A1-217ENST00000588138 KRTAP2-2Q9BYT5 123 aa4.22□□□□□ -1.73
ATP6V0A1-217ENST00000588138 KRTAP2-1Q9BYU5 128 aa4.22□□□□□ -1.73
ATP6V0A1-217ENST00000588138 KRTAP19-4Q3LI73 84 aa4.2□□□□□ -1.74
ATP6V0A1-217ENST00000588138 MT1GP13640 62 aa4.17□□□□□ -1.74
ATP6V0A1-217ENST00000588138 LCE5AQ5TCM9 118 aa4.16□□□□□ -1.74
ATP6V0A1-217ENST00000588138 LCE3BQ5TA77 95 aa4.14□□□□□ -1.75
ATP6V0A1-217ENST00000588138 MT1MQ8N339 61 aa4.1□□□□□ -1.75
ATP6V0A1-217ENST00000588138 LCE3CQ5T5A8 94 aa4.09□□□□□ -1.75
ATP6V0A1-217ENST00000588138 KRTAP4-7Q9BYR0 210 aa4.03□□□□□ -1.76
ATP6V0A1-217ENST00000588138 GPR98Q8WXG9 6306 aa4.03□□□□□ -1.76
ATP6V0A1-217ENST00000588138 DSTQ03001 7570 aaKnown RBP4.01□□□□□ -1.77
ATP6V0A1-217ENST00000588138 KRTAP4-3Q9BYR4 195 aa3.97□□□□□ -1.77
ATP6V0A1-217ENST00000588138 SPRR5A0A1B0GTR4 108 aa3.94□□□□□ -1.78
ATP6V0A1-217ENST00000588138 KRTAP4-9Q9BYQ8 210 aa3.86□□□□□ -1.79
ATP6V0A1-217ENST00000588138 KRTAP9-6A8MVA2 160 aa3.83□□□□□ -1.8
ATP6V0A1-217ENST00000588138 LOC100996750A0A140TA64 210 aa3.8□□□□□ -1.8
ATP6V0A1-217ENST00000588138 LUZP6Q538Z0 58 aa3.77□□□□□ -1.81
ATP6V0A1-217ENST00000588138 LCE1DQ5T752 114 aa3.77□□□□□ -1.81
ATP6V0A1-217ENST00000588138 LCE4AQ5TA78 99 aa3.76□□□□□ -1.81
ATP6V0A1-217ENST00000588138 MT4P47944 62 aa3.72□□□□□ -1.81
ATP6V0A1-217ENST00000588138 KRTAP5-5Q701N2 237 aaPredicted RBP3.72□□□□□ -1.81
ATP6V0A1-217ENST00000588138 HMCN1Q96RW7 5635 aa3.72□□□□□ -1.81
ATP6V0A1-217ENST00000588138 KRTAP5-4Q6L8H1 288 aa3.7□□□□□ -1.82
ATP6V0A1-217ENST00000588138 MT1AP04731 61 aa3.61□□□□□ -1.83
ATP6V0A1-217ENST00000588138 KRTAP4-6Q9BYQ5 205 aa3.61□□□□□ -1.83
ATP6V0A1-217ENST00000588138 AHNAK2Q8IVF2 5795 aa3.57□□□□□ -1.84
ATP6V0A1-217ENST00000588138 KRTAP6-1Q3LI64 71 aa3.56□□□□□ -1.84
ATP6V0A1-217ENST00000588138 NDUFAF8A1L188 74 aa3.52□□□□□ -1.85
ATP6V0A1-217ENST00000588138 KRTAP12-4P60329 112 aa3.51□□□□□ -1.85
ATP6V0A1-217ENST00000588138 KRTAP5-10Q6L8G5 202 aa3.51□□□□□ -1.85
ATP6V0A1-217ENST00000588138 SYNE1Q8NF91 8797 aaKnown RBP3.49□□□□□ -1.85
ATP6V0A1-217ENST00000588138 KRTAP20-2Q3LI61 65 aa3.48□□□□□ -1.85
ATP6V0A1-217ENST00000588138 KRTAP9-4Q9BYQ2 154 aa3.44□□□□□ -1.86
ATP6V0A1-217ENST00000588138 KRTAP5-3Q6L8H2 238 aa3.43□□□□□ -1.86
ATP6V0A1-217ENST00000588138 KRTAP5-7Q6L8G8 165 aa3.37□□□□□ -1.87
ATP6V0A1-217ENST00000588138 KRTAP6-2Q3LI66 62 aa3.3□□□□□ -1.88
ATP6V0A1-217ENST00000588138 KRTAP5-2Q701N4 177 aa3.3□□□□□ -1.88
ATP6V0A1-217ENST00000588138 MT3P25713 68 aa3.29□□□□□ -1.88
ATP6V0A1-217ENST00000588138 KRTAP4-11Q9BYQ6 195 aa3.18□□□□□ -1.9
ATP6V0A1-217ENST00000588138 KRTAP9-9Q9BYP9 154 aa3.17□□□□□ -1.9
ATP6V0A1-217ENST00000588138 OBSCNQ5VST9 7968 aa3.08□□□□□ -1.92
ATP6V0A1-217ENST00000588138 KRTAP5-8O75690 187 aa3.08□□□□□ -1.92
ATP6V0A1-217ENST00000588138 AHNAKQ09666 5890 aaKnown RBP3.06□□□□□ -1.92
ATP6V0A1-217ENST00000588138 LCE3DQ9BYE3 92 aa3.06□□□□□ -1.92
ATP6V0A1-217ENST00000588138 KRTAP4-12Q9BQ66 201 aa3□□□□□ -1.93
ATP6V0A1-217ENST00000588138 LCE3EQ5T5B0 92 aa2.96□□□□□ -1.94
ATP6V0A1-217ENST00000588138 MUC5ACP98088 5654 aa2.95□□□□□ -1.94
ATP6V0A1-217ENST00000588138 INE1O15225 51 aa2.94□□□□□ -1.94
ATP6V0A1-217ENST00000588138 MUC5BQ9HC84 5762 aaPredicted RBP2.94□□□□□ -1.94
ATP6V0A1-217ENST00000588138 LCE1EQ5T753 118 aa2.92□□□□□ -1.94
ATP6V0A1-217ENST00000588138 KRTAP5-1Q6L8H4 278 aa2.9□□□□□ -1.95
ATP6V0A1-217ENST00000588138 LCE1CQ5T751 118 aa2.71□□□□□ -1.98
ATP6V0A1-217ENST00000588138 LCE1BQ5T7P3 118 aa2.71□□□□□ -1.98
ATP6V0A1-217ENST00000588138 LCE1FQ5T754 118 aa2.7□□□□□ -1.98
ATP6V0A1-217ENST00000588138 KRTAP4-2Q9BYR5 136 aa2.69□□□□□ -1.98
ATP6V0A1-217ENST00000588138 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.53□□□□□ -2
ATP6V0A1-217ENST00000588138 PRM1P04553 51 aa2.49□□□□□ -2.01
ATP6V0A1-217ENST00000588138 KRTAP5-11Q6L8G4 156 aa2.41□□□□□ -2.02
ATP6V0A1-217ENST00000588138 KRTAP21-2Q3LI59 83 aa2.33□□□□□ -2.04
ATP6V0A1-217ENST00000588138 PHGR1C9JFL3 82 aa2.07□□□□□ -2.08
ATP6V0A1-217ENST00000588138 KRTAP4-4Q9BYR3 166 aa2.05□□□□□ -2.08
ATP6V0A1-217ENST00000588138 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.11
ATP6V0A1-217ENST00000588138 KRTAP21-1Q3LI58 79 aa1.55□□□□□ -2.16
ATP6V0A1-217ENST00000588138 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 12.5 ms