RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 GPR98Q8WXG9 6306 aa5.2□□□□□ -1.58
VMP1-206ENST00000587945 PSPHP1O15172 72 aa5.18□□□□□ -1.58
VMP1-206ENST00000587945 MT1GP13640 62 aa5.17□□□□□ -1.58
VMP1-206ENST00000587945 LCE1DQ5T752 114 aa5.13□□□□□ -1.59
VMP1-206ENST00000587945 PP632Q6XCG6 107 aa5.11□□□□□ -1.59
VMP1-206ENST00000587945 MT1MQ8N339 61 aa5.11□□□□□ -1.59
VMP1-206ENST00000587945 MT1LQ93083 61 aa5.1□□□□□ -1.59
VMP1-206ENST00000587945 A8MU10 97 aa5.08□□□□□ -1.6
VMP1-206ENST00000587945 MT4P47944 62 aa5.07□□□□□ -1.6
VMP1-206ENST00000587945 LCE3AQ5TA76 89 aa5.05□□□□□ -1.6
VMP1-206ENST00000587945 LCE4AQ5TA78 99 aa5.05□□□□□ -1.6
VMP1-206ENST00000587945 KRTAP4-7Q9BYR0 210 aa5.05□□□□□ -1.6
VMP1-206ENST00000587945 HMCN1Q96RW7 5635 aa5.05□□□□□ -1.6
VMP1-206ENST00000587945 KRTAP4-3Q9BYR4 195 aa5.04□□□□□ -1.6
VMP1-206ENST00000587945 C10orf95Q9H7T3 257 aa5.04□□□□□ -1.6
VMP1-206ENST00000587945 UQCR11O14957 56 aa5.03□□□□□ -1.6
VMP1-206ENST00000587945 A6NED7 52 aa5.01□□□□□ -1.61
VMP1-206ENST00000587945 MIR22HGQ0VDD5 57 aa4.99□□□□□ -1.61
VMP1-206ENST00000587945 TNP1P09430 55 aa4.98□□□□□ -1.61
VMP1-206ENST00000587945 KRTAP5-4Q6L8H1 288 aa4.94□□□□□ -1.62
VMP1-206ENST00000587945 AHNAK2Q8IVF2 5795 aa4.92□□□□□ -1.62
VMP1-206ENST00000587945 CDC42SE1Q9NRR8 79 aa4.9□□□□□ -1.63
VMP1-206ENST00000587945 BRK1Q8WUW1 75 aa4.85□□□□□ -1.63
VMP1-206ENST00000587945 KRTAP12-3P60328 96 aa4.83□□□□□ -1.64
VMP1-206ENST00000587945 KRTAP4-2Q9BYR5 136 aa4.83□□□□□ -1.64
VMP1-206ENST00000587945 KRTAP5-10Q6L8G5 202 aa4.82□□□□□ -1.64
VMP1-206ENST00000587945 K7ERS5 55 aa4.74□□□□□ -1.65
VMP1-206ENST00000587945 KRTAP4-11Q9BYQ6 195 aa4.74□□□□□ -1.65
VMP1-206ENST00000587945 KRTAP19-4Q3LI73 84 aa4.73□□□□□ -1.65
VMP1-206ENST00000587945 KRTAP5-5Q701N2 237 aaPredicted RBP4.69□□□□□ -1.66
VMP1-206ENST00000587945 KRTAP20-2Q3LI61 65 aa4.68□□□□□ -1.66
VMP1-206ENST00000587945 KRTAP5-3Q6L8H2 238 aa4.68□□□□□ -1.66
VMP1-206ENST00000587945 PRO0628Q9UI54 55 aa4.65□□□□□ -1.67
VMP1-206ENST00000587945 KRTAP5-7Q6L8G8 165 aa4.64□□□□□ -1.67
VMP1-206ENST00000587945 SPRR5A0A1B0GTR4 108 aa4.61□□□□□ -1.67
VMP1-206ENST00000587945 KRTAP25-1Q3LHN0 102 aa4.61□□□□□ -1.67
VMP1-206ENST00000587945 KRTAP12-4P60329 112 aa4.59□□□□□ -1.67
VMP1-206ENST00000587945 ROMO1P60602 79 aa4.56□□□□□ -1.68
VMP1-206ENST00000587945 PMAIP1Q13794 54 aa4.56□□□□□ -1.68
VMP1-206ENST00000587945 SYNE1Q8NF91 8797 aaKnown RBP4.53□□□□□ -1.68
VMP1-206ENST00000587945 KRTAP15-1Q3LI76 137 aa4.46□□□□□ -1.7
VMP1-206ENST00000587945 H3BS24 57 aa4.45□□□□□ -1.7
VMP1-206ENST00000587945 LCE3CQ5T5A8 94 aa4.43□□□□□ -1.7
VMP1-206ENST00000587945 KRTAP23-1A1A580 65 aa4.4□□□□□ -1.71
VMP1-206ENST00000587945 PRAC1Q96KF2 57 aa4.34□□□□□ -1.71
VMP1-206ENST00000587945 KRTAP6-1Q3LI64 71 aa4.33□□□□□ -1.72
VMP1-206ENST00000587945 KTN1-AS1Q86SY8 53 aa4.33□□□□□ -1.72
VMP1-206ENST00000587945 MT1AP04731 61 aa4.32□□□□□ -1.72
VMP1-206ENST00000587945 KRTAP5-2Q701N4 177 aa4.3□□□□□ -1.72
VMP1-206ENST00000587945 SVIPQ8NHG7 77 aa4.28□□□□□ -1.72
VMP1-206ENST00000587945 KRTAP9-6A8MVA2 160 aa4.22□□□□□ -1.73
VMP1-206ENST00000587945 KRTAP5-8O75690 187 aa4.17□□□□□ -1.74
VMP1-206ENST00000587945 KRTAP6-2Q3LI66 62 aa4.16□□□□□ -1.74
VMP1-206ENST00000587945 MUC5BQ9HC84 5762 aaPredicted RBP4.08□□□□□ -1.76
VMP1-206ENST00000587945 AHNAKQ09666 5890 aaKnown RBP4.07□□□□□ -1.76
VMP1-206ENST00000587945 MUC5ACP98088 5654 aa4.03□□□□□ -1.76
VMP1-206ENST00000587945 OBSCNQ5VST9 7968 aa4□□□□□ -1.77
VMP1-206ENST00000587945 MT3P25713 68 aa3.96□□□□□ -1.78
VMP1-206ENST00000587945 KRTAP5-1Q6L8H4 278 aa3.9□□□□□ -1.79
VMP1-206ENST00000587945 LCE1EQ5T753 118 aa3.64□□□□□ -1.83
VMP1-206ENST00000587945 LCE1BQ5T7P3 118 aa3.5□□□□□ -1.85
VMP1-206ENST00000587945 LUZP6Q538Z0 58 aa3.49□□□□□ -1.85
VMP1-206ENST00000587945 LCE1CQ5T751 118 aa3.39□□□□□ -1.87
VMP1-206ENST00000587945 NDUFAF8A1L188 74 aa3.35□□□□□ -1.87
VMP1-206ENST00000587945 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.27□□□□□ -1.89
VMP1-206ENST00000587945 A0A0A0MQY5 61 aa3.21□□□□□ -1.9
VMP1-206ENST00000587945 KRTAP5-11Q6L8G4 156 aa3.2□□□□□ -1.9
VMP1-206ENST00000587945 LCE3DQ9BYE3 92 aa3.16□□□□□ -1.9
VMP1-206ENST00000587945 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
VMP1-206ENST00000587945 LCE3EQ5T5B0 92 aa2.94□□□□□ -1.94
VMP1-206ENST00000587945 KRTAP21-2Q3LI59 83 aa2.84□□□□□ -1.95
VMP1-206ENST00000587945 PHGR1C9JFL3 82 aa2.82□□□□□ -1.96
VMP1-206ENST00000587945 INE1O15225 51 aa2.72□□□□□ -1.97
VMP1-206ENST00000587945 KRTAP4-4Q9BYR3 166 aa2.7□□□□□ -1.98
VMP1-206ENST00000587945 MUC19Q7Z5P9 8384 aa2.49□□□□□ -2.01
VMP1-206ENST00000587945 PRM1P04553 51 aa2.39□□□□□ -2.03
VMP1-206ENST00000587945 KRTAP21-1Q3LI58 79 aa2.12□□□□□ -2.07
VMP1-206ENST00000587945 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 127.7 ms