RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 KRTAP5-4Q6L8H1 288 aa4.93□□□□□ -1.62
ERCC1-205ENST00000587888 C10orf95Q9H7T3 257 aa4.91□□□□□ -1.62
ERCC1-205ENST00000587888 LCE3AQ5TA76 89 aa4.9□□□□□ -1.63
ERCC1-205ENST00000587888 KRTAP5-10Q6L8G5 202 aa4.9□□□□□ -1.63
ERCC1-205ENST00000587888 AHNAK2Q8IVF2 5795 aa4.85□□□□□ -1.63
ERCC1-205ENST00000587888 SMIM26A0A096LP01 95 aa4.84□□□□□ -1.63
ERCC1-205ENST00000587888 A8MU10 97 aa4.84□□□□□ -1.63
ERCC1-205ENST00000587888 TNP1P09430 55 aa4.84□□□□□ -1.63
ERCC1-205ENST00000587888 KRTAP4-7Q9BYR0 210 aa4.8□□□□□ -1.64
ERCC1-205ENST00000587888 A0A1B0GU69 56 aa4.79□□□□□ -1.64
ERCC1-205ENST00000587888 KRTAP5-3Q6L8H2 238 aa4.75□□□□□ -1.65
ERCC1-205ENST00000587888 KRTAP5-7Q6L8G8 165 aa4.74□□□□□ -1.65
ERCC1-205ENST00000587888 V9GYY9 64 aa4.74□□□□□ -1.65
ERCC1-205ENST00000587888 Q1T7F1 81 aa4.71□□□□□ -1.66
ERCC1-205ENST00000587888 KRTAP12-3P60328 96 aa4.7□□□□□ -1.66
ERCC1-205ENST00000587888 KRTAP20-2Q3LI61 65 aa4.69□□□□□ -1.66
ERCC1-205ENST00000587888 LINC01558Q9Y6Z2 57 aa4.68□□□□□ -1.66
ERCC1-205ENST00000587888 PRR15LQ9BU68 103 aa4.64□□□□□ -1.67
ERCC1-205ENST00000587888 SPRR5A0A1B0GTR4 108 aa4.62□□□□□ -1.67
ERCC1-205ENST00000587888 KRTAP5-5Q701N2 237 aaPredicted RBP4.62□□□□□ -1.67
ERCC1-205ENST00000587888 KRTAP12-4P60329 112 aa4.6□□□□□ -1.67
ERCC1-205ENST00000587888 PSPHP1O15172 72 aa4.59□□□□□ -1.67
ERCC1-205ENST00000587888 LOC100996750A0A140TA64 210 aa4.56□□□□□ -1.68
ERCC1-205ENST00000587888 A6NED7 52 aa4.48□□□□□ -1.69
ERCC1-205ENST00000587888 UQCR11O14957 56 aa4.48□□□□□ -1.69
ERCC1-205ENST00000587888 MIR22HGQ0VDD5 57 aa4.42□□□□□ -1.7
ERCC1-205ENST00000587888 KRTAP25-1Q3LHN0 102 aa4.42□□□□□ -1.7
ERCC1-205ENST00000587888 CDC42SE1Q9NRR8 79 aa4.41□□□□□ -1.7
ERCC1-205ENST00000587888 BRK1Q8WUW1 75 aa4.4□□□□□ -1.71
ERCC1-205ENST00000587888 KRTAP19-4Q3LI73 84 aa4.36□□□□□ -1.71
ERCC1-205ENST00000587888 KRTAP4-11Q9BYQ6 195 aa4.35□□□□□ -1.71
ERCC1-205ENST00000587888 PRO0628Q9UI54 55 aa4.32□□□□□ -1.72
ERCC1-205ENST00000587888 KRTAP15-1Q3LI76 137 aa4.31□□□□□ -1.72
ERCC1-205ENST00000587888 LCE3CQ5T5A8 94 aa4.31□□□□□ -1.72
ERCC1-205ENST00000587888 SYNE1Q8NF91 8797 aaKnown RBP4.31□□□□□ -1.72
ERCC1-205ENST00000587888 K7ERS5 55 aa4.27□□□□□ -1.73
ERCC1-205ENST00000587888 KRTAP6-1Q3LI64 71 aa4.26□□□□□ -1.73
ERCC1-205ENST00000587888 KRTAP5-2Q701N4 177 aa4.26□□□□□ -1.73
ERCC1-205ENST00000587888 MT1AP04731 61 aa4.24□□□□□ -1.73
ERCC1-205ENST00000587888 KRTAP23-1A1A580 65 aa4.21□□□□□ -1.74
ERCC1-205ENST00000587888 KRTAP5-8O75690 187 aa4.2□□□□□ -1.74
ERCC1-205ENST00000587888 PMAIP1Q13794 54 aa4.16□□□□□ -1.74
ERCC1-205ENST00000587888 KRTAP9-4Q9BYQ2 154 aa4.16□□□□□ -1.74
ERCC1-205ENST00000587888 KRTAP6-2Q3LI66 62 aa4.13□□□□□ -1.75
ERCC1-205ENST00000587888 KRTAP9-6A8MVA2 160 aa4.07□□□□□ -1.76
ERCC1-205ENST00000587888 ROMO1P60602 79 aa4.05□□□□□ -1.76
ERCC1-205ENST00000587888 KRTAP9-9Q9BYP9 154 aa4.05□□□□□ -1.76
ERCC1-205ENST00000587888 MUC5ACP98088 5654 aa4.04□□□□□ -1.76
ERCC1-205ENST00000587888 AHNAKQ09666 5890 aaKnown RBP4.01□□□□□ -1.77
ERCC1-205ENST00000587888 KTN1-AS1Q86SY8 53 aa4□□□□□ -1.77
ERCC1-205ENST00000587888 MUC5BQ9HC84 5762 aaPredicted RBP4□□□□□ -1.77
ERCC1-205ENST00000587888 OBSCNQ5VST9 7968 aa3.97□□□□□ -1.77
ERCC1-205ENST00000587888 MT3P25713 68 aa3.91□□□□□ -1.78
ERCC1-205ENST00000587888 KRTAP5-1Q6L8H4 278 aa3.89□□□□□ -1.79
ERCC1-205ENST00000587888 SVIPQ8NHG7 77 aa3.88□□□□□ -1.79
ERCC1-205ENST00000587888 PRAC1Q96KF2 57 aa3.86□□□□□ -1.79
ERCC1-205ENST00000587888 H3BS24 57 aa3.81□□□□□ -1.8
ERCC1-205ENST00000587888 LCE1EQ5T753 118 aa3.62□□□□□ -1.83
ERCC1-205ENST00000587888 LCE1BQ5T7P3 118 aa3.5□□□□□ -1.85
ERCC1-205ENST00000587888 KRTAP4-2Q9BYR5 136 aa3.46□□□□□ -1.86
ERCC1-205ENST00000587888 LCE1CQ5T751 118 aa3.37□□□□□ -1.87
ERCC1-205ENST00000587888 KRTAP4-12Q9BQ66 201 aa3.29□□□□□ -1.88
ERCC1-205ENST00000587888 LUZP6Q538Z0 58 aa3.22□□□□□ -1.89
ERCC1-205ENST00000587888 A0A0A0MQY5 61 aa3.16□□□□□ -1.9
ERCC1-205ENST00000587888 NDUFAF8A1L188 74 aa3.07□□□□□ -1.92
ERCC1-205ENST00000587888 LCE3DQ9BYE3 92 aa3.06□□□□□ -1.92
ERCC1-205ENST00000587888 KRTAP5-11Q6L8G4 156 aa3.05□□□□□ -1.92
ERCC1-205ENST00000587888 LCE1FQ5T754 118 aa3.03□□□□□ -1.92
ERCC1-205ENST00000587888 KRTAP5-6Q6L8G9 129 aaPredicted RBP3□□□□□ -1.93
ERCC1-205ENST00000587888 PHGR1C9JFL3 82 aa2.9□□□□□ -1.95
ERCC1-205ENST00000587888 LCE3EQ5T5B0 92 aa2.83□□□□□ -1.96
ERCC1-205ENST00000587888 KRTAP21-2Q3LI59 83 aa2.8□□□□□ -1.96
ERCC1-205ENST00000587888 KRTAP4-4Q9BYR3 166 aa2.66□□□□□ -1.98
ERCC1-205ENST00000587888 INE1O15225 51 aa2.6□□□□□ -1.99
ERCC1-205ENST00000587888 MUC19Q7Z5P9 8384 aa2.43□□□□□ -2.02
ERCC1-205ENST00000587888 KRTAP21-1Q3LI58 79 aa2.18□□□□□ -2.06
ERCC1-205ENST00000587888 PRM1P04553 51 aa2.09□□□□□ -2.07
ERCC1-205ENST00000587888 MUC16Q8WXI7 14507 aa1.71□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 6 ms