RNA–Protein interactions for RNA: ENST00000587843.5

ROGDI-209, Transcript of rogdi homolog, humanhuman

TSL 2

Gene ROGDI, Length 1,362 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROGDI-209ENST00000587843 LCE5AQ5TCM9 118 aa8.95□□□□□ -0.98
ROGDI-209ENST00000587843 KRTAP25-1Q3LHN0 102 aa8.93□□□□□ -0.98
ROGDI-209ENST00000587843 KRTAP2-2Q9BYT5 123 aa8.9□□□□□ -0.98
ROGDI-209ENST00000587843 KRTAP2-1Q9BYU5 128 aa8.9□□□□□ -0.98
ROGDI-209ENST00000587843 PRO0628Q9UI54 55 aa8.9□□□□□ -0.98
ROGDI-209ENST00000587843 LCE3BQ5TA77 95 aa8.86□□□□□ -0.99
ROGDI-209ENST00000587843 MT1GP13640 62 aa8.82□□□□□ -1
ROGDI-209ENST00000587843 PP632Q6XCG6 107 aa8.76□□□□□ -1.01
ROGDI-209ENST00000587843 MT1LQ93083 61 aa8.75□□□□□ -1.01
ROGDI-209ENST00000587843 KRTAP12-3P60328 96 aa8.72□□□□□ -1.01
ROGDI-209ENST00000587843 KRTAP23-1A1A580 65 aa8.66□□□□□ -1.02
ROGDI-209ENST00000587843 MT1MQ8N339 61 aa8.64□□□□□ -1.03
ROGDI-209ENST00000587843 DSTQ03001 7570 aaKnown RBP8.61□□□□□ -1.03
ROGDI-209ENST00000587843 PMAIP1Q13794 54 aa8.61□□□□□ -1.03
ROGDI-209ENST00000587843 ROMO1P60602 79 aa8.58□□□□□ -1.04
ROGDI-209ENST00000587843 KRTAP19-4Q3LI73 84 aa8.37□□□□□ -1.07
ROGDI-209ENST00000587843 KRTAP4-3Q9BYR4 195 aa8.35□□□□□ -1.07
ROGDI-209ENST00000587843 KRTAP15-1Q3LI76 137 aa8.27□□□□□ -1.09
ROGDI-209ENST00000587843 KTN1-AS1Q86SY8 53 aa8.27□□□□□ -1.09
ROGDI-209ENST00000587843 KRTAP4-7Q9BYR0 210 aa8.27□□□□□ -1.09
ROGDI-209ENST00000587843 LCE4AQ5TA78 99 aa8.15□□□□□ -1.1
ROGDI-209ENST00000587843 PRAC1Q96KF2 57 aa8.13□□□□□ -1.11
ROGDI-209ENST00000587843 KRTAP4-9Q9BYQ8 210 aa8.09□□□□□ -1.12
ROGDI-209ENST00000587843 KRTAP5-4Q6L8H1 288 aa8.06□□□□□ -1.12
ROGDI-209ENST00000587843 LCE3CQ5T5A8 94 aa8.05□□□□□ -1.12
ROGDI-209ENST00000587843 LCE1DQ5T752 114 aa7.99□□□□□ -1.13
ROGDI-209ENST00000587843 MT4P47944 62 aa7.92□□□□□ -1.14
ROGDI-209ENST00000587843 KRTAP5-5Q701N2 237 aaPredicted RBP7.92□□□□□ -1.14
ROGDI-209ENST00000587843 HMCN1Q96RW7 5635 aa7.9□□□□□ -1.14
ROGDI-209ENST00000587843 SVIPQ8NHG7 77 aa7.86□□□□□ -1.15
ROGDI-209ENST00000587843 LOC100996750A0A140TA64 210 aa7.83□□□□□ -1.16
ROGDI-209ENST00000587843 KRTAP4-6Q9BYQ5 205 aa7.74□□□□□ -1.17
ROGDI-209ENST00000587843 KRTAP12-4P60329 112 aa7.62□□□□□ -1.19
ROGDI-209ENST00000587843 SPRR5A0A1B0GTR4 108 aa7.61□□□□□ -1.19
ROGDI-209ENST00000587843 KRTAP20-2Q3LI61 65 aa7.56□□□□□ -1.2
ROGDI-209ENST00000587843 KRTAP9-6A8MVA2 160 aa7.55□□□□□ -1.2
ROGDI-209ENST00000587843 SYNE1Q8NF91 8797 aaKnown RBP7.53□□□□□ -1.2
ROGDI-209ENST00000587843 GPR98Q8WXG9 6306 aa7.53□□□□□ -1.2
ROGDI-209ENST00000587843 MT1AP04731 61 aa7.47□□□□□ -1.21
ROGDI-209ENST00000587843 AHNAK2Q8IVF2 5795 aa7.43□□□□□ -1.22
ROGDI-209ENST00000587843 KRTAP6-1Q3LI64 71 aa7.37□□□□□ -1.23
ROGDI-209ENST00000587843 KRTAP5-3Q6L8H2 238 aa7.33□□□□□ -1.24
ROGDI-209ENST00000587843 KRTAP5-10Q6L8G5 202 aa7.26□□□□□ -1.25
ROGDI-209ENST00000587843 KRTAP9-4Q9BYQ2 154 aa7.19□□□□□ -1.26
ROGDI-209ENST00000587843 KRTAP5-2Q701N4 177 aa7.13□□□□□ -1.27
ROGDI-209ENST00000587843 KRTAP6-2Q3LI66 62 aa6.97□□□□□ -1.29
ROGDI-209ENST00000587843 KRTAP5-7Q6L8G8 165 aa6.95□□□□□ -1.3
ROGDI-209ENST00000587843 MT3P25713 68 aa6.83□□□□□ -1.32
ROGDI-209ENST00000587843 KRTAP4-11Q9BYQ6 195 aa6.81□□□□□ -1.32
ROGDI-209ENST00000587843 KRTAP5-8O75690 187 aa6.57□□□□□ -1.36
ROGDI-209ENST00000587843 LUZP6Q538Z0 58 aa6.57□□□□□ -1.36
ROGDI-209ENST00000587843 OBSCNQ5VST9 7968 aa6.55□□□□□ -1.36
ROGDI-209ENST00000587843 NDUFAF8A1L188 74 aa6.37□□□□□ -1.39
ROGDI-209ENST00000587843 KRTAP5-1Q6L8H4 278 aa6.31□□□□□ -1.4
ROGDI-209ENST00000587843 LCE1EQ5T753 118 aa6.22□□□□□ -1.41
ROGDI-209ENST00000587843 KRTAP9-9Q9BYP9 154 aa6.18□□□□□ -1.42
ROGDI-209ENST00000587843 MUC5ACP98088 5654 aa6.14□□□□□ -1.43
ROGDI-209ENST00000587843 MUC5BQ9HC84 5762 aaPredicted RBP6.09□□□□□ -1.43
ROGDI-209ENST00000587843 AHNAKQ09666 5890 aaKnown RBP5.97□□□□□ -1.45
ROGDI-209ENST00000587843 LCE3DQ9BYE3 92 aa5.89□□□□□ -1.47
ROGDI-209ENST00000587843 KRTAP4-2Q9BYR5 136 aa5.79□□□□□ -1.48
ROGDI-209ENST00000587843 LCE1CQ5T751 118 aa5.77□□□□□ -1.49
ROGDI-209ENST00000587843 LCE1BQ5T7P3 118 aa5.77□□□□□ -1.49
ROGDI-209ENST00000587843 LCE3EQ5T5B0 92 aa5.6□□□□□ -1.51
ROGDI-209ENST00000587843 A0A0A0MQY5 61 aa5.53□□□□□ -1.52
ROGDI-209ENST00000587843 H3BS24 57 aa5.33□□□□□ -1.56
ROGDI-209ENST00000587843 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.31□□□□□ -1.56
ROGDI-209ENST00000587843 INE1O15225 51 aa5.26□□□□□ -1.57
ROGDI-209ENST00000587843 KRTAP5-11Q6L8G4 156 aa5.19□□□□□ -1.58
ROGDI-209ENST00000587843 KRTAP4-12Q9BQ66 201 aa5.04□□□□□ -1.6
ROGDI-209ENST00000587843 LCE1FQ5T754 118 aa4.99□□□□□ -1.61
ROGDI-209ENST00000587843 KRTAP21-2Q3LI59 83 aa4.88□□□□□ -1.63
ROGDI-209ENST00000587843 PHGR1C9JFL3 82 aa4.45□□□□□ -1.7
ROGDI-209ENST00000587843 PRM1P04553 51 aa4.4□□□□□ -1.7
ROGDI-209ENST00000587843 KRTAP4-4Q9BYR3 166 aa4.33□□□□□ -1.72
ROGDI-209ENST00000587843 MUC19Q7Z5P9 8384 aa4.01□□□□□ -1.77
ROGDI-209ENST00000587843 KRTAP21-1Q3LI58 79 aa3.22□□□□□ -1.89
ROGDI-209ENST00000587843 MUC16Q8WXI7 14507 aa2.89□□□□□ -1.95
Retrieved 78 of 20,778 RNA–protein pairs in 141.1 ms