RNA–Protein interactions for RNA: ENST00000587757.5

LDLRAD4-211, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 2 BASIC

Gene LDLRAD4, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-211ENST00000587757 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.68□□□□□ -1.34
LDLRAD4-211ENST00000587757 KRTAP9-6A8MVA2 160 aa6.68□□□□□ -1.34
LDLRAD4-211ENST00000587757 MUC12Q9UKN1 5478 aa6.66□□□□□ -1.34
LDLRAD4-211ENST00000587757 SPRR2FQ96RM1 72 aa6.65□□□□□ -1.34
LDLRAD4-211ENST00000587757 KRTAP4-7Q9BYR0 210 aa6.58□□□□□ -1.36
LDLRAD4-211ENST00000587757 KRTAP5-9P26371 169 aa6.57□□□□□ -1.36
LDLRAD4-211ENST00000587757 MT1LQ93083 61 aa6.57□□□□□ -1.36
LDLRAD4-211ENST00000587757 KRTAP6-3Q3LI67 103 aa6.49□□□□□ -1.37
LDLRAD4-211ENST00000587757 MDN1Q9NU22 5596 aa6.47□□□□□ -1.37
LDLRAD4-211ENST00000587757 KRTAP19-3Q7Z4W3 81 aa6.45□□□□□ -1.38
LDLRAD4-211ENST00000587757 KRTAP2-3P0C7H8 128 aa6.42□□□□□ -1.38
LDLRAD4-211ENST00000587757 KRTAP2-4Q9BYR9 128 aa6.42□□□□□ -1.38
LDLRAD4-211ENST00000587757 KRTAP2-1Q9BYU5 128 aa6.42□□□□□ -1.38
LDLRAD4-211ENST00000587757 KRTAP19-4Q3LI73 84 aa6.4□□□□□ -1.38
LDLRAD4-211ENST00000587757 MT1GP13640 62 aa6.4□□□□□ -1.39
LDLRAD4-211ENST00000587757 LCE1AQ5T7P2 110 aa6.37□□□□□ -1.39
LDLRAD4-211ENST00000587757 LCE5AQ5TCM9 118 aa6.37□□□□□ -1.39
LDLRAD4-211ENST00000587757 KRTAP9-7A8MTY7 169 aa6.34□□□□□ -1.4
LDLRAD4-211ENST00000587757 MT1MQ8N339 61 aa6.32□□□□□ -1.4
LDLRAD4-211ENST00000587757 SPRR2EP22531 72 aa6.31□□□□□ -1.4
LDLRAD4-211ENST00000587757 SPRR2BP35325 72 aa6.31□□□□□ -1.4
LDLRAD4-211ENST00000587757 SPRR2AP35326 72 aa6.31□□□□□ -1.4
LDLRAD4-211ENST00000587757 KRTAP4-3Q9BYR4 195 aa6.27□□□□□ -1.41
LDLRAD4-211ENST00000587757 DSTQ03001 7570 aaKnown RBP6.26□□□□□ -1.41
LDLRAD4-211ENST00000587757 LOC100996750A0A140TA64 210 aa6.14□□□□□ -1.43
LDLRAD4-211ENST00000587757 NEBP20929 6669 aa6.13□□□□□ -1.43
LDLRAD4-211ENST00000587757 SPRR2DP22532 72 aa6.07□□□□□ -1.44
LDLRAD4-211ENST00000587757 LCE3BQ5TA77 95 aa5.85□□□□□ -1.47
LDLRAD4-211ENST00000587757 KRTAP5-5Q701N2 237 aaPredicted RBP5.7□□□□□ -1.5
LDLRAD4-211ENST00000587757 KRTAP12-4P60329 112 aa5.67□□□□□ -1.5
LDLRAD4-211ENST00000587757 KRTAP20-1Q3LI63 56 aa5.59□□□□□ -1.52
LDLRAD4-211ENST00000587757 KRTAP2-2Q9BYT5 123 aa5.57□□□□□ -1.52
LDLRAD4-211ENST00000587757 KRTAP6-1Q3LI64 71 aa5.55□□□□□ -1.52
LDLRAD4-211ENST00000587757 MT1AP04731 61 aa5.55□□□□□ -1.52
LDLRAD4-211ENST00000587757 KRTAP4-9Q9BYQ8 210 aa5.53□□□□□ -1.52
LDLRAD4-211ENST00000587757 SYNE1Q8NF91 8797 aaKnown RBP5.5□□□□□ -1.53
LDLRAD4-211ENST00000587757 KRTAP5-4Q6L8H1 288 aa5.47□□□□□ -1.53
LDLRAD4-211ENST00000587757 LCE4AQ5TA78 99 aa5.35□□□□□ -1.55
LDLRAD4-211ENST00000587757 MT4P47944 62 aa5.32□□□□□ -1.56
LDLRAD4-211ENST00000587757 KRTAP9-4Q9BYQ2 154 aa5.31□□□□□ -1.56
LDLRAD4-211ENST00000587757 KRTAP4-6Q9BYQ5 205 aa5.3□□□□□ -1.56
LDLRAD4-211ENST00000587757 LCE3DQ9BYE3 92 aa5.29□□□□□ -1.56
LDLRAD4-211ENST00000587757 LCE3EQ5T5B0 92 aa5.22□□□□□ -1.57
LDLRAD4-211ENST00000587757 LCE1DQ5T752 114 aa5.22□□□□□ -1.57
LDLRAD4-211ENST00000587757 HMCN1Q96RW7 5635 aa5.18□□□□□ -1.58
LDLRAD4-211ENST00000587757 KRTAP6-2Q3LI66 62 aa5.14□□□□□ -1.59
LDLRAD4-211ENST00000587757 KRTAP20-2Q3LI61 65 aa5.13□□□□□ -1.59
LDLRAD4-211ENST00000587757 PRM1P04553 51 aa5.05□□□□□ -1.6
LDLRAD4-211ENST00000587757 MT3P25713 68 aa5.04□□□□□ -1.6
LDLRAD4-211ENST00000587757 OBSCNQ5VST9 7968 aa4.96□□□□□ -1.62
LDLRAD4-211ENST00000587757 KRTAP5-3Q6L8H2 238 aa4.95□□□□□ -1.62
LDLRAD4-211ENST00000587757 KRTAP5-2Q701N4 177 aa4.94□□□□□ -1.62
LDLRAD4-211ENST00000587757 AHNAK2Q8IVF2 5795 aa4.54□□□□□ -1.68
LDLRAD4-211ENST00000587757 KRTAP4-11Q9BYQ6 195 aa4.48□□□□□ -1.69
LDLRAD4-211ENST00000587757 LCE1EQ5T753 118 aa4.38□□□□□ -1.71
LDLRAD4-211ENST00000587757 KRTAP5-10Q6L8G5 202 aa4.36□□□□□ -1.71
LDLRAD4-211ENST00000587757 KRTAP5-1Q6L8H4 278 aa4.32□□□□□ -1.72
LDLRAD4-211ENST00000587757 KRTAP5-8O75690 187 aa4.31□□□□□ -1.72
LDLRAD4-211ENST00000587757 GPR98Q8WXG9 6306 aa4.21□□□□□ -1.74
LDLRAD4-211ENST00000587757 LCE1BQ5T7P3 118 aa4.17□□□□□ -1.74
LDLRAD4-211ENST00000587757 MUC5ACP98088 5654 aa4.16□□□□□ -1.74
LDLRAD4-211ENST00000587757 KRTAP4-2Q9BYR5 136 aa4.12□□□□□ -1.75
LDLRAD4-211ENST00000587757 KRTAP5-7Q6L8G8 165 aa4.12□□□□□ -1.75
LDLRAD4-211ENST00000587757 LCE1CQ5T751 118 aa4.1□□□□□ -1.75
LDLRAD4-211ENST00000587757 LCE1FQ5T754 118 aa4.03□□□□□ -1.76
LDLRAD4-211ENST00000587757 KRTAP9-9Q9BYP9 154 aa3.9□□□□□ -1.79
LDLRAD4-211ENST00000587757 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.8□□□□□ -1.8
LDLRAD4-211ENST00000587757 MUC5BQ9HC84 5762 aaPredicted RBP3.78□□□□□ -1.8
LDLRAD4-211ENST00000587757 KRTAP21-2Q3LI59 83 aa3.64□□□□□ -1.83
LDLRAD4-211ENST00000587757 KRTAP5-11Q6L8G4 156 aa3.59□□□□□ -1.83
LDLRAD4-211ENST00000587757 KRTAP4-12Q9BQ66 201 aa3.51□□□□□ -1.85
LDLRAD4-211ENST00000587757 AHNAKQ09666 5890 aaKnown RBP3.43□□□□□ -1.86
LDLRAD4-211ENST00000587757 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
LDLRAD4-211ENST00000587757 KRTAP21-1Q3LI58 79 aa3.17□□□□□ -1.9
LDLRAD4-211ENST00000587757 PHGR1C9JFL3 82 aa3.12□□□□□ -1.91
LDLRAD4-211ENST00000587757 MUC19Q7Z5P9 8384 aa3.04□□□□□ -1.92
LDLRAD4-211ENST00000587757 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 85.3 ms