RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 KRTAP5-7Q6L8G8 165 aa4.82□□□□□ -1.64
DNMT1-213ENST00000587604 SERP2Q8N6R1 65 aa4.81□□□□□ -1.64
DNMT1-213ENST00000587604 TMEM258P61165 79 aa4.8□□□□□ -1.64
DNMT1-213ENST00000587604 LCE3AQ5TA76 89 aa4.8□□□□□ -1.64
DNMT1-213ENST00000587604 KRTAP5-3Q6L8H2 238 aa4.79□□□□□ -1.64
DNMT1-213ENST00000587604 RPS28P62857 69 aaKnown RBP4.78□□□□□ -1.64
DNMT1-213ENST00000587604 TNP1P09430 55 aa4.75□□□□□ -1.65
DNMT1-213ENST00000587604 SMIM26A0A096LP01 95 aa4.72□□□□□ -1.65
DNMT1-213ENST00000587604 KRTAP4-7Q9BYR0 210 aa4.71□□□□□ -1.66
DNMT1-213ENST00000587604 KRTAP20-2Q3LI61 65 aa4.7□□□□□ -1.66
DNMT1-213ENST00000587604 A8MU10 97 aa4.67□□□□□ -1.66
DNMT1-213ENST00000587604 SPRR5A0A1B0GTR4 108 aa4.66□□□□□ -1.66
DNMT1-213ENST00000587604 ATP5EP56381 51 aaPredicted RBP4.66□□□□□ -1.66
DNMT1-213ENST00000587604 KRTAP12-3P60328 96 aa4.64□□□□□ -1.67
DNMT1-213ENST00000587604 KRTAP5-5Q701N2 237 aaPredicted RBP4.64□□□□□ -1.67
DNMT1-213ENST00000587604 A0A1B0GU69 56 aa4.63□□□□□ -1.67
DNMT1-213ENST00000587604 H7BZZ5 65 aa4.61□□□□□ -1.67
DNMT1-213ENST00000587604 KRTAP12-4P60329 112 aa4.6□□□□□ -1.67
DNMT1-213ENST00000587604 SYNE1Q8NF91 8797 aaKnown RBP4.5□□□□□ -1.69
DNMT1-213ENST00000587604 LOC100996750A0A140TA64 210 aa4.47□□□□□ -1.69
DNMT1-213ENST00000587604 PRO0628Q9UI54 55 aa4.47□□□□□ -1.69
DNMT1-213ENST00000587604 PRR15LQ9BU68 103 aa4.4□□□□□ -1.71
DNMT1-213ENST00000587604 KRTAP19-4Q3LI73 84 aa4.39□□□□□ -1.71
DNMT1-213ENST00000587604 Q1T7F1 81 aa4.38□□□□□ -1.71
DNMT1-213ENST00000587604 KRTAP4-11Q9BYQ6 195 aa4.38□□□□□ -1.71
DNMT1-213ENST00000587604 V9GYY9 64 aa4.38□□□□□ -1.71
DNMT1-213ENST00000587604 BRK1Q8WUW1 75 aa4.36□□□□□ -1.71
DNMT1-213ENST00000587604 KRTAP25-1Q3LHN0 102 aa4.33□□□□□ -1.72
DNMT1-213ENST00000587604 KRTAP5-2Q701N4 177 aa4.3□□□□□ -1.72
DNMT1-213ENST00000587604 LINC01558Q9Y6Z2 57 aa4.29□□□□□ -1.72
DNMT1-213ENST00000587604 UQCR11O14957 56 aa4.25□□□□□ -1.73
DNMT1-213ENST00000587604 LCE3CQ5T5A8 94 aa4.24□□□□□ -1.73
DNMT1-213ENST00000587604 PSPHP1O15172 72 aa4.23□□□□□ -1.73
DNMT1-213ENST00000587604 KRTAP5-8O75690 187 aa4.23□□□□□ -1.73
DNMT1-213ENST00000587604 KRTAP15-1Q3LI76 137 aa4.23□□□□□ -1.73
DNMT1-213ENST00000587604 MT1AP04731 61 aa4.22□□□□□ -1.73
DNMT1-213ENST00000587604 KRTAP6-1Q3LI64 71 aa4.21□□□□□ -1.74
DNMT1-213ENST00000587604 PMAIP1Q13794 54 aa4.18□□□□□ -1.74
DNMT1-213ENST00000587604 MUC5BQ9HC84 5762 aaPredicted RBP4.17□□□□□ -1.74
DNMT1-213ENST00000587604 KRTAP23-1A1A580 65 aa4.17□□□□□ -1.74
DNMT1-213ENST00000587604 MUC5ACP98088 5654 aa4.16□□□□□ -1.74
DNMT1-213ENST00000587604 AHNAKQ09666 5890 aaKnown RBP4.14□□□□□ -1.75
DNMT1-213ENST00000587604 A6NED7 52 aa4.14□□□□□ -1.75
DNMT1-213ENST00000587604 CDC42SE1Q9NRR8 79 aa4.14□□□□□ -1.75
DNMT1-213ENST00000587604 KRTAP9-4Q9BYQ2 154 aa4.13□□□□□ -1.75
DNMT1-213ENST00000587604 OBSCNQ5VST9 7968 aa4.12□□□□□ -1.75
DNMT1-213ENST00000587604 MIR22HGQ0VDD5 57 aa4.12□□□□□ -1.75
DNMT1-213ENST00000587604 K7ERS5 55 aa4.11□□□□□ -1.75
DNMT1-213ENST00000587604 KTN1-AS1Q86SY8 53 aa4.1□□□□□ -1.75
DNMT1-213ENST00000587604 KRTAP6-2Q3LI66 62 aa4.09□□□□□ -1.75
DNMT1-213ENST00000587604 KRTAP9-9Q9BYP9 154 aa4.07□□□□□ -1.76
DNMT1-213ENST00000587604 KRTAP9-6A8MVA2 160 aa4□□□□□ -1.77
DNMT1-213ENST00000587604 KRTAP5-1Q6L8H4 278 aa3.91□□□□□ -1.78
DNMT1-213ENST00000587604 MT3P25713 68 aa3.89□□□□□ -1.79
DNMT1-213ENST00000587604 PRAC1Q96KF2 57 aa3.79□□□□□ -1.8
DNMT1-213ENST00000587604 ROMO1P60602 79 aa3.76□□□□□ -1.81
DNMT1-213ENST00000587604 LCE1EQ5T753 118 aa3.66□□□□□ -1.82
DNMT1-213ENST00000587604 H3BS24 57 aa3.46□□□□□ -1.86
DNMT1-213ENST00000587604 KRTAP4-2Q9BYR5 136 aa3.46□□□□□ -1.86
DNMT1-213ENST00000587604 LCE1BQ5T7P3 118 aa3.44□□□□□ -1.86
DNMT1-213ENST00000587604 LCE1CQ5T751 118 aa3.39□□□□□ -1.87
DNMT1-213ENST00000587604 KRTAP4-12Q9BQ66 201 aa3.24□□□□□ -1.89
DNMT1-213ENST00000587604 NDUFAF8A1L188 74 aa3.23□□□□□ -1.89
DNMT1-213ENST00000587604 LUZP6Q538Z0 58 aa3.09□□□□□ -1.91
DNMT1-213ENST00000587604 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
DNMT1-213ENST00000587604 KRTAP5-11Q6L8G4 156 aa3.09□□□□□ -1.91
DNMT1-213ENST00000587604 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.05□□□□□ -1.92
DNMT1-213ENST00000587604 LCE3DQ9BYE3 92 aa3□□□□□ -1.93
DNMT1-213ENST00000587604 A0A0A0MQY5 61 aa2.99□□□□□ -1.93
DNMT1-213ENST00000587604 PHGR1C9JFL3 82 aa2.9□□□□□ -1.95
DNMT1-213ENST00000587604 KRTAP21-2Q3LI59 83 aa2.79□□□□□ -1.96
DNMT1-213ENST00000587604 LCE3EQ5T5B0 92 aa2.77□□□□□ -1.97
DNMT1-213ENST00000587604 INE1O15225 51 aa2.73□□□□□ -1.97
DNMT1-213ENST00000587604 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
DNMT1-213ENST00000587604 MUC19Q7Z5P9 8384 aa2.54□□□□□ -2
DNMT1-213ENST00000587604 KRTAP21-1Q3LI58 79 aa2.21□□□□□ -2.06
DNMT1-213ENST00000587604 PRM1P04553 51 aa1.9□□□□□ -2.11
DNMT1-213ENST00000587604 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 11.1 ms