RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 A0A0A0MQY5 61 aa4.01□□□□□ -1.77
CLPTM1-207ENST00000587537 PP632Q6XCG6 107 aa4.01□□□□□ -1.77
CLPTM1-207ENST00000587537 KRTAP8-1Q8IUC2 63 aa4□□□□□ -1.77
CLPTM1-207ENST00000587537 KRTAP6-3Q3LI67 103 aa3.95□□□□□ -1.78
CLPTM1-207ENST00000587537 KRTAP5-9P26371 169 aa3.93□□□□□ -1.78
CLPTM1-207ENST00000587537 LCE3AQ5TA76 89 aa3.93□□□□□ -1.78
CLPTM1-207ENST00000587537 MACF1Q9UPN3 7388 aaKnown RBP3.93□□□□□ -1.78
CLPTM1-207ENST00000587537 KTN1-AS1Q86SY8 53 aa3.89□□□□□ -1.79
CLPTM1-207ENST00000587537 KMT2DO14686 5537 aa3.89□□□□□ -1.79
CLPTM1-207ENST00000587537 SPRR2FQ96RM1 72 aa3.86□□□□□ -1.79
CLPTM1-207ENST00000587537 KRTAP12-3P60328 96 aa3.83□□□□□ -1.8
CLPTM1-207ENST00000587537 KRTAP19-5Q3LI72 72 aa3.83□□□□□ -1.8
CLPTM1-207ENST00000587537 KRTAP19-7Q3SYF9 63 aa3.83□□□□□ -1.8
CLPTM1-207ENST00000587537 MT1EP04732 61 aa3.8□□□□□ -1.8
CLPTM1-207ENST00000587537 SYNE2Q8WXH0 6885 aaKnown RBP3.8□□□□□ -1.8
CLPTM1-207ENST00000587537 PRAC1Q96KF2 57 aa3.73□□□□□ -1.81
CLPTM1-207ENST00000587537 SPRR2EP22531 72 aa3.72□□□□□ -1.81
CLPTM1-207ENST00000587537 SPRR2BP35325 72 aa3.72□□□□□ -1.81
CLPTM1-207ENST00000587537 SPRR2AP35326 72 aa3.72□□□□□ -1.81
CLPTM1-207ENST00000587537 LCE1AQ5T7P2 110 aa3.72□□□□□ -1.81
CLPTM1-207ENST00000587537 KRTAP19-3Q7Z4W3 81 aa3.72□□□□□ -1.81
CLPTM1-207ENST00000587537 MUC12Q9UKN1 5478 aa3.71□□□□□ -1.82
CLPTM1-207ENST00000587537 MT1GP13640 62 aa3.7□□□□□ -1.82
CLPTM1-207ENST00000587537 MDN1Q9NU22 5596 aa3.69□□□□□ -1.82
CLPTM1-207ENST00000587537 MT1LQ93083 61 aa3.69□□□□□ -1.82
CLPTM1-207ENST00000587537 SPRR2DP22532 72 aa3.6□□□□□ -1.83
CLPTM1-207ENST00000587537 MT1MQ8N339 61 aa3.59□□□□□ -1.83
CLPTM1-207ENST00000587537 NEBP20929 6669 aa3.59□□□□□ -1.84
CLPTM1-207ENST00000587537 LCE3CQ5T5A8 94 aa3.56□□□□□ -1.84
CLPTM1-207ENST00000587537 KRTAP2-3P0C7H8 128 aa3.5□□□□□ -1.85
CLPTM1-207ENST00000587537 KRTAP2-4Q9BYR9 128 aa3.5□□□□□ -1.85
CLPTM1-207ENST00000587537 KRTAP20-1Q3LI63 56 aa3.48□□□□□ -1.85
CLPTM1-207ENST00000587537 KRTAP2-2Q9BYT5 123 aa3.41□□□□□ -1.86
CLPTM1-207ENST00000587537 KRTAP2-1Q9BYU5 128 aa3.41□□□□□ -1.86
CLPTM1-207ENST00000587537 KRTAP4-3Q9BYR4 195 aa3.39□□□□□ -1.87
CLPTM1-207ENST00000587537 SPRR5A0A1B0GTR4 108 aa3.38□□□□□ -1.87
CLPTM1-207ENST00000587537 DSTQ03001 7570 aaKnown RBP3.34□□□□□ -1.88
CLPTM1-207ENST00000587537 LUZP6Q538Z0 58 aa3.33□□□□□ -1.88
CLPTM1-207ENST00000587537 KRTAP9-6A8MVA2 160 aa3.26□□□□□ -1.89
CLPTM1-207ENST00000587537 KRTAP5-5Q701N2 237 aaPredicted RBP3.26□□□□□ -1.89
CLPTM1-207ENST00000587537 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.23□□□□□ -1.89
CLPTM1-207ENST00000587537 KRTAP5-4Q6L8H1 288 aa3.23□□□□□ -1.89
CLPTM1-207ENST00000587537 KRTAP5-11Q6L8G4 156 aa3.21□□□□□ -1.9
CLPTM1-207ENST00000587537 MT3P25713 68 aa3.2□□□□□ -1.9
CLPTM1-207ENST00000587537 LCE1EQ5T753 118 aa3.18□□□□□ -1.9
CLPTM1-207ENST00000587537 MT1AP04731 61 aa3.17□□□□□ -1.9
CLPTM1-207ENST00000587537 KRTAP12-4P60329 112 aa3.15□□□□□ -1.91
CLPTM1-207ENST00000587537 NDUFAF8A1L188 74 aa3.09□□□□□ -1.91
CLPTM1-207ENST00000587537 KRTAP6-1Q3LI64 71 aa3.08□□□□□ -1.92
CLPTM1-207ENST00000587537 MT4P47944 62 aa3.06□□□□□ -1.92
CLPTM1-207ENST00000587537 HMCN1Q96RW7 5635 aa3.04□□□□□ -1.92
CLPTM1-207ENST00000587537 GPR98Q8WXG9 6306 aa3.02□□□□□ -1.93
CLPTM1-207ENST00000587537 KRTAP20-2Q3LI61 65 aa3.01□□□□□ -1.93
CLPTM1-207ENST00000587537 SYNE1Q8NF91 8797 aaKnown RBP2.93□□□□□ -1.94
CLPTM1-207ENST00000587537 KRTAP5-2Q701N4 177 aa2.89□□□□□ -1.95
CLPTM1-207ENST00000587537 KRTAP6-2Q3LI66 62 aa2.88□□□□□ -1.95
CLPTM1-207ENST00000587537 AHNAK2Q8IVF2 5795 aa2.8□□□□□ -1.96
CLPTM1-207ENST00000587537 KRTAP5-1Q6L8H4 278 aa2.79□□□□□ -1.96
CLPTM1-207ENST00000587537 KRTAP5-10Q6L8G5 202 aa2.77□□□□□ -1.97
CLPTM1-207ENST00000587537 INE1O15225 51 aa2.76□□□□□ -1.97
CLPTM1-207ENST00000587537 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
CLPTM1-207ENST00000587537 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
CLPTM1-207ENST00000587537 LCE3DQ9BYE3 92 aa2.67□□□□□ -1.98
CLPTM1-207ENST00000587537 KRTAP5-7Q6L8G8 165 aa2.66□□□□□ -1.98
CLPTM1-207ENST00000587537 LCE3EQ5T5B0 92 aa2.57□□□□□ -2
CLPTM1-207ENST00000587537 KRTAP5-8O75690 187 aa2.54□□□□□ -2
CLPTM1-207ENST00000587537 OBSCNQ5VST9 7968 aa2.49□□□□□ -2.01
CLPTM1-207ENST00000587537 MUC5ACP98088 5654 aa2.42□□□□□ -2.02
CLPTM1-207ENST00000587537 LCE1CQ5T751 118 aa2.41□□□□□ -2.02
CLPTM1-207ENST00000587537 LCE1BQ5T7P3 118 aa2.41□□□□□ -2.02
CLPTM1-207ENST00000587537 MUC5BQ9HC84 5762 aaPredicted RBP2.36□□□□□ -2.03
CLPTM1-207ENST00000587537 AHNAKQ09666 5890 aaKnown RBP2.34□□□□□ -2.03
CLPTM1-207ENST00000587537 PRM1P04553 51 aa2.09□□□□□ -2.07
CLPTM1-207ENST00000587537 KRTAP21-2Q3LI59 83 aa2.03□□□□□ -2.08
CLPTM1-207ENST00000587537 PHGR1C9JFL3 82 aa1.82□□□□□ -2.12
CLPTM1-207ENST00000587537 MUC19Q7Z5P9 8384 aa1.71□□□□□ -2.14
CLPTM1-207ENST00000587537 KRTAP21-1Q3LI58 79 aa1.27□□□□□ -2.21
CLPTM1-207ENST00000587537 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 161.5 ms