RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 LCE3AQ5TA76 89 aa6.34□□□□□ -1.39
TPM4-206ENST00000587201 UQCR11O14957 56 aa6.33□□□□□ -1.4
TPM4-206ENST00000587201 MT1LQ93083 61 aa6.3□□□□□ -1.4
TPM4-206ENST00000587201 MT1MQ8N339 61 aa6.27□□□□□ -1.41
TPM4-206ENST00000587201 KRTAP4-9Q9BYQ8 210 aa6.26□□□□□ -1.41
TPM4-206ENST00000587201 MIR22HGQ0VDD5 57 aa6.23□□□□□ -1.41
TPM4-206ENST00000587201 A6NED7 52 aa6.17□□□□□ -1.42
TPM4-206ENST00000587201 KRTAP4-3Q9BYR4 195 aa6.13□□□□□ -1.43
TPM4-206ENST00000587201 KRTAP12-3P60328 96 aa6.1□□□□□ -1.43
TPM4-206ENST00000587201 LCE1DQ5T752 114 aa6.1□□□□□ -1.43
TPM4-206ENST00000587201 LCE4AQ5TA78 99 aa6.1□□□□□ -1.43
TPM4-206ENST00000587201 K7ERS5 55 aa6.05□□□□□ -1.44
TPM4-206ENST00000587201 MT4P47944 62 aa6.05□□□□□ -1.44
TPM4-206ENST00000587201 GPR98Q8WXG9 6306 aa6.02□□□□□ -1.45
TPM4-206ENST00000587201 KRTAP25-1Q3LHN0 102 aa6□□□□□ -1.45
TPM4-206ENST00000587201 KRTAP4-7Q9BYR0 210 aa6□□□□□ -1.45
TPM4-206ENST00000587201 HMCN1Q96RW7 5635 aa5.98□□□□□ -1.45
TPM4-206ENST00000587201 KRTAP5-4Q6L8H1 288 aa5.97□□□□□ -1.45
TPM4-206ENST00000587201 CDC42SE1Q9NRR8 79 aa5.97□□□□□ -1.45
TPM4-206ENST00000587201 KRTAP4-6Q9BYQ5 205 aa5.86□□□□□ -1.47
TPM4-206ENST00000587201 KRTAP23-1A1A580 65 aa5.76□□□□□ -1.49
TPM4-206ENST00000587201 BRK1Q8WUW1 75 aa5.76□□□□□ -1.49
TPM4-206ENST00000587201 AHNAK2Q8IVF2 5795 aa5.75□□□□□ -1.49
TPM4-206ENST00000587201 KRTAP19-4Q3LI73 84 aa5.73□□□□□ -1.49
TPM4-206ENST00000587201 KRTAP5-5Q701N2 237 aaPredicted RBP5.73□□□□□ -1.49
TPM4-206ENST00000587201 ROMO1P60602 79 aa5.71□□□□□ -1.5
TPM4-206ENST00000587201 KRTAP15-1Q3LI76 137 aa5.69□□□□□ -1.5
TPM4-206ENST00000587201 LOC100996750A0A140TA64 210 aa5.68□□□□□ -1.5
TPM4-206ENST00000587201 KRTAP5-10Q6L8G5 202 aa5.66□□□□□ -1.5
TPM4-206ENST00000587201 KRTAP20-2Q3LI61 65 aa5.65□□□□□ -1.5
TPM4-206ENST00000587201 KRTAP12-4P60329 112 aa5.62□□□□□ -1.51
TPM4-206ENST00000587201 SPRR5A0A1B0GTR4 108 aa5.61□□□□□ -1.51
TPM4-206ENST00000587201 LCE3CQ5T5A8 94 aa5.61□□□□□ -1.51
TPM4-206ENST00000587201 SYNE1Q8NF91 8797 aaKnown RBP5.56□□□□□ -1.52
TPM4-206ENST00000587201 KRTAP5-3Q6L8H2 238 aa5.54□□□□□ -1.52
TPM4-206ENST00000587201 KRTAP5-7Q6L8G8 165 aa5.44□□□□□ -1.54
TPM4-206ENST00000587201 PMAIP1Q13794 54 aa5.43□□□□□ -1.54
TPM4-206ENST00000587201 PRO0628Q9UI54 55 aa5.39□□□□□ -1.55
TPM4-206ENST00000587201 MT1AP04731 61 aa5.36□□□□□ -1.55
TPM4-206ENST00000587201 KRTAP6-1Q3LI64 71 aa5.33□□□□□ -1.56
TPM4-206ENST00000587201 KRTAP9-6A8MVA2 160 aa5.28□□□□□ -1.56
TPM4-206ENST00000587201 KRTAP5-2Q701N4 177 aa5.22□□□□□ -1.57
TPM4-206ENST00000587201 KRTAP9-4Q9BYQ2 154 aa5.18□□□□□ -1.58
TPM4-206ENST00000587201 KRTAP4-11Q9BYQ6 195 aa5.16□□□□□ -1.58
TPM4-206ENST00000587201 PRAC1Q96KF2 57 aa5.13□□□□□ -1.59
TPM4-206ENST00000587201 KRTAP6-2Q3LI66 62 aa5.09□□□□□ -1.59
TPM4-206ENST00000587201 KTN1-AS1Q86SY8 53 aa5.06□□□□□ -1.6
TPM4-206ENST00000587201 KRTAP5-8O75690 187 aa4.98□□□□□ -1.61
TPM4-206ENST00000587201 MT3P25713 68 aa4.91□□□□□ -1.62
TPM4-206ENST00000587201 OBSCNQ5VST9 7968 aa4.91□□□□□ -1.62
TPM4-206ENST00000587201 SVIPQ8NHG7 77 aa4.82□□□□□ -1.64
TPM4-206ENST00000587201 MUC5BQ9HC84 5762 aaPredicted RBP4.76□□□□□ -1.65
TPM4-206ENST00000587201 KRTAP9-9Q9BYP9 154 aa4.75□□□□□ -1.65
TPM4-206ENST00000587201 MUC5ACP98088 5654 aa4.7□□□□□ -1.66
TPM4-206ENST00000587201 AHNAKQ09666 5890 aaKnown RBP4.7□□□□□ -1.66
TPM4-206ENST00000587201 KRTAP5-1Q6L8H4 278 aa4.69□□□□□ -1.66
TPM4-206ENST00000587201 LCE1EQ5T753 118 aa4.49□□□□□ -1.69
TPM4-206ENST00000587201 LUZP6Q538Z0 58 aa4.28□□□□□ -1.72
TPM4-206ENST00000587201 LCE1BQ5T7P3 118 aa4.27□□□□□ -1.73
TPM4-206ENST00000587201 KRTAP4-2Q9BYR5 136 aa4.24□□□□□ -1.73
TPM4-206ENST00000587201 LCE1CQ5T751 118 aa4.17□□□□□ -1.74
TPM4-206ENST00000587201 LCE3DQ9BYE3 92 aa4.05□□□□□ -1.76
TPM4-206ENST00000587201 KRTAP4-12Q9BQ66 201 aa3.87□□□□□ -1.79
TPM4-206ENST00000587201 NDUFAF8A1L188 74 aa3.84□□□□□ -1.79
TPM4-206ENST00000587201 LCE3EQ5T5B0 92 aa3.81□□□□□ -1.8
TPM4-206ENST00000587201 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.78□□□□□ -1.8
TPM4-206ENST00000587201 KRTAP5-11Q6L8G4 156 aa3.77□□□□□ -1.81
TPM4-206ENST00000587201 LCE1FQ5T754 118 aa3.68□□□□□ -1.82
TPM4-206ENST00000587201 KRTAP21-2Q3LI59 83 aa3.5□□□□□ -1.85
TPM4-206ENST00000587201 PHGR1C9JFL3 82 aa3.32□□□□□ -1.88
TPM4-206ENST00000587201 A0A0A0MQY5 61 aa3.27□□□□□ -1.89
TPM4-206ENST00000587201 KRTAP4-4Q9BYR3 166 aa3.23□□□□□ -1.89
TPM4-206ENST00000587201 INE1O15225 51 aa3.16□□□□□ -1.9
TPM4-206ENST00000587201 MUC19Q7Z5P9 8384 aa3.01□□□□□ -1.93
TPM4-206ENST00000587201 PRM1P04553 51 aa2.94□□□□□ -1.94
TPM4-206ENST00000587201 H3BS24 57 aa2.57□□□□□ -2
TPM4-206ENST00000587201 KRTAP21-1Q3LI58 79 aa2.51□□□□□ -2.01
TPM4-206ENST00000587201 MUC16Q8WXI7 14507 aa2.19□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 12.3 ms