RNA–Protein interactions for RNA: ENST00000586737.5

ERCC2-208, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-208ENST00000586737 MT4P47944 62 aa4.45□□□□□ -1.7
ERCC2-208ENST00000586737 KRTAP5-4Q6L8H1 288 aa4.45□□□□□ -1.7
ERCC2-208ENST00000586737 LINC01558Q9Y6Z2 57 aa4.45□□□□□ -1.7
ERCC2-208ENST00000586737 ATP5EP56381 51 aaPredicted RBP4.43□□□□□ -1.7
ERCC2-208ENST00000586737 PRR15LQ9BU68 103 aa4.42□□□□□ -1.7
ERCC2-208ENST00000586737 KRTAP4-7Q9BYR0 210 aa4.41□□□□□ -1.7
ERCC2-208ENST00000586737 AHNAK2Q8IVF2 5795 aa4.39□□□□□ -1.71
ERCC2-208ENST00000586737 KRTAP12-3P60328 96 aa4.38□□□□□ -1.71
ERCC2-208ENST00000586737 KRTAP4-6Q9BYQ5 205 aa4.37□□□□□ -1.71
ERCC2-208ENST00000586737 PCP4P48539 62 aa4.35□□□□□ -1.71
ERCC2-208ENST00000586737 UQCR11O14957 56 aa4.31□□□□□ -1.72
ERCC2-208ENST00000586737 TMEM258P61165 79 aa4.3□□□□□ -1.72
ERCC2-208ENST00000586737 KRTAP5-10Q6L8G5 202 aa4.27□□□□□ -1.73
ERCC2-208ENST00000586737 KRTAP5-5Q701N2 237 aaPredicted RBP4.26□□□□□ -1.73
ERCC2-208ENST00000586737 KRTAP25-1Q3LHN0 102 aa4.23□□□□□ -1.73
ERCC2-208ENST00000586737 MIR22HGQ0VDD5 57 aa4.22□□□□□ -1.73
ERCC2-208ENST00000586737 KRTAP20-2Q3LI61 65 aa4.19□□□□□ -1.74
ERCC2-208ENST00000586737 LOC100996750A0A140TA64 210 aa4.17□□□□□ -1.74
ERCC2-208ENST00000586737 SYNE1Q8NF91 8797 aaKnown RBP4.17□□□□□ -1.74
ERCC2-208ENST00000586737 SPRR5A0A1B0GTR4 108 aa4.15□□□□□ -1.75
ERCC2-208ENST00000586737 KRTAP5-3Q6L8H2 238 aa4.15□□□□□ -1.75
ERCC2-208ENST00000586737 PSPHP1O15172 72 aa4.1□□□□□ -1.75
ERCC2-208ENST00000586737 KRTAP19-4Q3LI73 84 aa4.1□□□□□ -1.75
ERCC2-208ENST00000586737 KRTAP5-7Q6L8G8 165 aa4.1□□□□□ -1.75
ERCC2-208ENST00000586737 KRTAP23-1A1A580 65 aa4.08□□□□□ -1.76
ERCC2-208ENST00000586737 K7ERS5 55 aa4.08□□□□□ -1.76
ERCC2-208ENST00000586737 KRTAP12-4P60329 112 aa4.08□□□□□ -1.76
ERCC2-208ENST00000586737 Q1T7F1 81 aa4.07□□□□□ -1.76
ERCC2-208ENST00000586737 KRTAP15-1Q3LI76 137 aa4.06□□□□□ -1.76
ERCC2-208ENST00000586737 V9GYY9 64 aa4.05□□□□□ -1.76
ERCC2-208ENST00000586737 LCE3CQ5T5A8 94 aa4.03□□□□□ -1.76
ERCC2-208ENST00000586737 A6NED7 52 aa3.92□□□□□ -1.78
ERCC2-208ENST00000586737 MT1AP04731 61 aa3.91□□□□□ -1.78
ERCC2-208ENST00000586737 KRTAP6-1Q3LI64 71 aa3.91□□□□□ -1.78
ERCC2-208ENST00000586737 KRTAP5-2Q701N4 177 aa3.9□□□□□ -1.79
ERCC2-208ENST00000586737 CDC42SE1Q9NRR8 79 aa3.9□□□□□ -1.79
ERCC2-208ENST00000586737 KRTAP9-6A8MVA2 160 aa3.87□□□□□ -1.79
ERCC2-208ENST00000586737 ROMO1P60602 79 aa3.86□□□□□ -1.79
ERCC2-208ENST00000586737 RPS28P62857 69 aaKnown RBP3.85□□□□□ -1.79
ERCC2-208ENST00000586737 KRTAP4-11Q9BYQ6 195 aa3.83□□□□□ -1.8
ERCC2-208ENST00000586737 KRTAP9-4Q9BYQ2 154 aa3.79□□□□□ -1.8
ERCC2-208ENST00000586737 KRTAP5-8O75690 187 aa3.73□□□□□ -1.81
ERCC2-208ENST00000586737 KRTAP6-2Q3LI66 62 aa3.73□□□□□ -1.81
ERCC2-208ENST00000586737 SVIPQ8NHG7 77 aa3.68□□□□□ -1.82
ERCC2-208ENST00000586737 OBSCNQ5VST9 7968 aa3.66□□□□□ -1.82
ERCC2-208ENST00000586737 AHNAKQ09666 5890 aaKnown RBP3.64□□□□□ -1.83
ERCC2-208ENST00000586737 MUC5BQ9HC84 5762 aaPredicted RBP3.63□□□□□ -1.83
ERCC2-208ENST00000586737 MUC5ACP98088 5654 aa3.61□□□□□ -1.83
ERCC2-208ENST00000586737 KRTAP4-12Q9BQ66 201 aa3.61□□□□□ -1.83
ERCC2-208ENST00000586737 MT3P25713 68 aa3.55□□□□□ -1.84
ERCC2-208ENST00000586737 PRO0628Q9UI54 55 aa3.53□□□□□ -1.84
ERCC2-208ENST00000586737 KRTAP5-1Q6L8H4 278 aa3.51□□□□□ -1.85
ERCC2-208ENST00000586737 BRK1Q8WUW1 75 aa3.5□□□□□ -1.85
ERCC2-208ENST00000586737 KRTAP9-9Q9BYP9 154 aa3.5□□□□□ -1.85
ERCC2-208ENST00000586737 H3BS24 57 aa3.46□□□□□ -1.86
ERCC2-208ENST00000586737 PMAIP1Q13794 54 aa3.32□□□□□ -1.88
ERCC2-208ENST00000586737 LCE1EQ5T753 118 aa3.3□□□□□ -1.88
ERCC2-208ENST00000586737 KTN1-AS1Q86SY8 53 aa3.25□□□□□ -1.89
ERCC2-208ENST00000586737 KRTAP4-2Q9BYR5 136 aa3.19□□□□□ -1.9
ERCC2-208ENST00000586737 LCE1BQ5T7P3 118 aa3.09□□□□□ -1.91
ERCC2-208ENST00000586737 LCE1CQ5T751 118 aa3.07□□□□□ -1.92
ERCC2-208ENST00000586737 PRAC1Q96KF2 57 aa3.04□□□□□ -1.92
ERCC2-208ENST00000586737 A0A0A0MQY5 61 aa2.9□□□□□ -1.95
ERCC2-208ENST00000586737 LCE3DQ9BYE3 92 aa2.87□□□□□ -1.95
ERCC2-208ENST00000586737 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.8□□□□□ -1.96
ERCC2-208ENST00000586737 KRTAP5-11Q6L8G4 156 aa2.79□□□□□ -1.96
ERCC2-208ENST00000586737 LCE1FQ5T754 118 aa2.71□□□□□ -1.98
ERCC2-208ENST00000586737 LCE3EQ5T5B0 92 aa2.69□□□□□ -1.98
ERCC2-208ENST00000586737 KRTAP21-2Q3LI59 83 aa2.59□□□□□ -1.99
ERCC2-208ENST00000586737 NDUFAF8A1L188 74 aa2.54□□□□□ -2
ERCC2-208ENST00000586737 LUZP6Q538Z0 58 aa2.53□□□□□ -2
ERCC2-208ENST00000586737 PHGR1C9JFL3 82 aa2.45□□□□□ -2.02
ERCC2-208ENST00000586737 KRTAP4-4Q9BYR3 166 aa2.37□□□□□ -2.03
ERCC2-208ENST00000586737 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
ERCC2-208ENST00000586737 INE1O15225 51 aa2.16□□□□□ -2.06
ERCC2-208ENST00000586737 PRM1P04553 51 aa1.98□□□□□ -2.09
ERCC2-208ENST00000586737 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
ERCC2-208ENST00000586737 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 11.3 ms