RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 MT1LQ93083 61 aa7.9□□□□□ -1.14
CIRBP-208ENST00000586548 KRTAP9-7A8MTY7 169 aa7.86□□□□□ -1.15
CIRBP-208ENST00000586548 KRTAP6-3Q3LI67 103 aa7.77□□□□□ -1.17
CIRBP-208ENST00000586548 SPRR2FQ96RM1 72 aa7.67□□□□□ -1.18
CIRBP-208ENST00000586548 KRTAP4-7Q9BYR0 210 aa7.67□□□□□ -1.18
CIRBP-208ENST00000586548 KRTAP5-9P26371 169 aa7.66□□□□□ -1.18
CIRBP-208ENST00000586548 KRTAP19-3Q7Z4W3 81 aa7.66□□□□□ -1.18
CIRBP-208ENST00000586548 MUC12Q9UKN1 5478 aa7.65□□□□□ -1.19
CIRBP-208ENST00000586548 MT1GP13640 62 aa7.61□□□□□ -1.19
CIRBP-208ENST00000586548 KRTAP9-6A8MVA2 160 aa7.53□□□□□ -1.2
CIRBP-208ENST00000586548 MT1MQ8N339 61 aa7.53□□□□□ -1.2
CIRBP-208ENST00000586548 H3BS24 57 aa7.51□□□□□ -1.21
CIRBP-208ENST00000586548 LCE5AQ5TCM9 118 aa7.48□□□□□ -1.21
CIRBP-208ENST00000586548 KRTAP4-3Q9BYR4 195 aa7.4□□□□□ -1.23
CIRBP-208ENST00000586548 SPRR2EP22531 72 aa7.38□□□□□ -1.23
CIRBP-208ENST00000586548 SPRR2BP35325 72 aa7.38□□□□□ -1.23
CIRBP-208ENST00000586548 SPRR2AP35326 72 aa7.38□□□□□ -1.23
CIRBP-208ENST00000586548 MDN1Q9NU22 5596 aa7.35□□□□□ -1.23
CIRBP-208ENST00000586548 LCE1AQ5T7P2 110 aa7.32□□□□□ -1.24
CIRBP-208ENST00000586548 NEBP20929 6669 aa7.27□□□□□ -1.25
CIRBP-208ENST00000586548 LOC100996750A0A140TA64 210 aa7.19□□□□□ -1.26
CIRBP-208ENST00000586548 A0A0A0MQY5 61 aa7.17□□□□□ -1.26
CIRBP-208ENST00000586548 SPRR2DP22532 72 aa7.12□□□□□ -1.27
CIRBP-208ENST00000586548 KRTAP2-3P0C7H8 128 aa7.08□□□□□ -1.28
CIRBP-208ENST00000586548 KRTAP2-4Q9BYR9 128 aa7.08□□□□□ -1.28
CIRBP-208ENST00000586548 KRTAP2-1Q9BYU5 128 aa7.08□□□□□ -1.28
CIRBP-208ENST00000586548 DSTQ03001 7570 aaKnown RBP7.06□□□□□ -1.28
CIRBP-208ENST00000586548 KRTAP20-1Q3LI63 56 aa6.94□□□□□ -1.3
CIRBP-208ENST00000586548 LCE3BQ5TA77 95 aa6.87□□□□□ -1.31
CIRBP-208ENST00000586548 KRTAP5-5Q701N2 237 aaPredicted RBP6.77□□□□□ -1.33
CIRBP-208ENST00000586548 KRTAP2-2Q9BYT5 123 aa6.73□□□□□ -1.33
CIRBP-208ENST00000586548 MT1AP04731 61 aa6.71□□□□□ -1.34
CIRBP-208ENST00000586548 INE1O15225 51 aa6.68□□□□□ -1.34
CIRBP-208ENST00000586548 KRTAP6-1Q3LI64 71 aa6.65□□□□□ -1.34
CIRBP-208ENST00000586548 SYNE1Q8NF91 8797 aaKnown RBP6.41□□□□□ -1.38
CIRBP-208ENST00000586548 KRTAP9-4Q9BYQ2 154 aa6.35□□□□□ -1.39
CIRBP-208ENST00000586548 KRTAP5-4Q6L8H1 288 aa6.34□□□□□ -1.39
CIRBP-208ENST00000586548 LCE4AQ5TA78 99 aa6.29□□□□□ -1.4
CIRBP-208ENST00000586548 KRTAP4-9Q9BYQ8 210 aa6.26□□□□□ -1.41
CIRBP-208ENST00000586548 KRTAP12-4P60329 112 aa6.22□□□□□ -1.41
CIRBP-208ENST00000586548 MT4P47944 62 aa6.2□□□□□ -1.42
CIRBP-208ENST00000586548 LCE1DQ5T752 114 aa6.16□□□□□ -1.42
CIRBP-208ENST00000586548 KRTAP6-2Q3LI66 62 aa6.08□□□□□ -1.44
CIRBP-208ENST00000586548 KRTAP4-6Q9BYQ5 205 aa6.07□□□□□ -1.44
CIRBP-208ENST00000586548 MT3P25713 68 aa6.06□□□□□ -1.44
CIRBP-208ENST00000586548 LCE3DQ9BYE3 92 aa6.01□□□□□ -1.45
CIRBP-208ENST00000586548 HMCN1Q96RW7 5635 aa5.97□□□□□ -1.45
CIRBP-208ENST00000586548 KRTAP20-2Q3LI61 65 aa5.92□□□□□ -1.46
CIRBP-208ENST00000586548 LCE3EQ5T5B0 92 aa5.88□□□□□ -1.47
CIRBP-208ENST00000586548 KRTAP5-2Q701N4 177 aa5.8□□□□□ -1.48
CIRBP-208ENST00000586548 KRTAP5-3Q6L8H2 238 aa5.69□□□□□ -1.5
CIRBP-208ENST00000586548 OBSCNQ5VST9 7968 aa5.54□□□□□ -1.52
CIRBP-208ENST00000586548 AHNAK2Q8IVF2 5795 aa5.49□□□□□ -1.53
CIRBP-208ENST00000586548 KRTAP5-10Q6L8G5 202 aa5.37□□□□□ -1.55
CIRBP-208ENST00000586548 GPR98Q8WXG9 6306 aa5.31□□□□□ -1.56
CIRBP-208ENST00000586548 KRTAP4-11Q9BYQ6 195 aa5.25□□□□□ -1.57
CIRBP-208ENST00000586548 PRM1P04553 51 aa5.24□□□□□ -1.57
CIRBP-208ENST00000586548 LCE1EQ5T753 118 aa5.2□□□□□ -1.58
CIRBP-208ENST00000586548 KRTAP5-7Q6L8G8 165 aa5.06□□□□□ -1.6
CIRBP-208ENST00000586548 KRTAP5-8O75690 187 aa5.05□□□□□ -1.6
CIRBP-208ENST00000586548 KRTAP5-1Q6L8H4 278 aa4.97□□□□□ -1.61
CIRBP-208ENST00000586548 MUC5ACP98088 5654 aa4.94□□□□□ -1.62
CIRBP-208ENST00000586548 LCE1BQ5T7P3 118 aa4.89□□□□□ -1.63
CIRBP-208ENST00000586548 LCE1CQ5T751 118 aa4.85□□□□□ -1.63
CIRBP-208ENST00000586548 KRTAP4-2Q9BYR5 136 aa4.85□□□□□ -1.63
CIRBP-208ENST00000586548 KRTAP9-9Q9BYP9 154 aa4.7□□□□□ -1.66
CIRBP-208ENST00000586548 KRTAP4-12Q9BQ66 201 aa4.58□□□□□ -1.68
CIRBP-208ENST00000586548 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.57□□□□□ -1.68
CIRBP-208ENST00000586548 MUC5BQ9HC84 5762 aaPredicted RBP4.43□□□□□ -1.7
CIRBP-208ENST00000586548 KRTAP21-2Q3LI59 83 aa4.35□□□□□ -1.71
CIRBP-208ENST00000586548 KRTAP5-11Q6L8G4 156 aa4.26□□□□□ -1.73
CIRBP-208ENST00000586548 AHNAKQ09666 5890 aaKnown RBP4.25□□□□□ -1.73
CIRBP-208ENST00000586548 KRTAP4-4Q9BYR3 166 aa3.84□□□□□ -1.79
CIRBP-208ENST00000586548 LCE1FQ5T754 118 aa3.81□□□□□ -1.8
CIRBP-208ENST00000586548 PHGR1C9JFL3 82 aa3.65□□□□□ -1.82
CIRBP-208ENST00000586548 MUC19Q7Z5P9 8384 aa3.27□□□□□ -1.89
CIRBP-208ENST00000586548 KRTAP21-1Q3LI58 79 aa3.25□□□□□ -1.89
CIRBP-208ENST00000586548 MUC16Q8WXI7 14507 aa2.44□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 10.9 ms