RNA–Protein interactions for RNA: ENST00000586443.1

GRN-205, Transcript of granulin precursor, humanhuman

TSL 3

Gene GRN, Length 1,557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-205ENST00000586443 SPRR2FQ96RM1 72 aa6.66□□□□□ -1.34
GRN-205ENST00000586443 LCE3CQ5T5A8 94 aa6.65□□□□□ -1.35
GRN-205ENST00000586443 KRTAP5-9P26371 169 aa6.62□□□□□ -1.35
GRN-205ENST00000586443 KRTAP19-3Q7Z4W3 81 aa6.57□□□□□ -1.36
GRN-205ENST00000586443 MT1GP13640 62 aa6.52□□□□□ -1.36
GRN-205ENST00000586443 MUC12Q9UKN1 5478 aa6.49□□□□□ -1.37
GRN-205ENST00000586443 LUZP6Q538Z0 58 aa6.49□□□□□ -1.37
GRN-205ENST00000586443 LCE5AQ5TCM9 118 aa6.46□□□□□ -1.38
GRN-205ENST00000586443 NEBP20929 6669 aa6.45□□□□□ -1.38
GRN-205ENST00000586443 KRTAP4-7Q9BYR0 210 aa6.44□□□□□ -1.38
GRN-205ENST00000586443 MT1MQ8N339 61 aa6.44□□□□□ -1.38
GRN-205ENST00000586443 LCE1AQ5T7P2 110 aa6.38□□□□□ -1.39
GRN-205ENST00000586443 NDUFAF8A1L188 74 aa6.33□□□□□ -1.4
GRN-205ENST00000586443 MDN1Q9NU22 5596 aa6.32□□□□□ -1.4
GRN-205ENST00000586443 SPRR2EP22531 72 aa6.31□□□□□ -1.4
GRN-205ENST00000586443 SPRR2BP35325 72 aa6.31□□□□□ -1.4
GRN-205ENST00000586443 SPRR2AP35326 72 aa6.31□□□□□ -1.4
GRN-205ENST00000586443 KRTAP9-6A8MVA2 160 aa6.27□□□□□ -1.41
GRN-205ENST00000586443 KRTAP4-3Q9BYR4 195 aa6.27□□□□□ -1.41
GRN-205ENST00000586443 KRTAP20-1Q3LI63 56 aa6.14□□□□□ -1.43
GRN-205ENST00000586443 SPRR2DP22532 72 aa6.09□□□□□ -1.43
GRN-205ENST00000586443 LOC100996750A0A140TA64 210 aa6.06□□□□□ -1.44
GRN-205ENST00000586443 KRTAP2-3P0C7H8 128 aa6.04□□□□□ -1.44
GRN-205ENST00000586443 KRTAP2-4Q9BYR9 128 aa6.04□□□□□ -1.44
GRN-205ENST00000586443 DSTQ03001 7570 aaKnown RBP5.96□□□□□ -1.46
GRN-205ENST00000586443 KRTAP2-2Q9BYT5 123 aa5.86□□□□□ -1.47
GRN-205ENST00000586443 KRTAP2-1Q9BYU5 128 aa5.86□□□□□ -1.47
GRN-205ENST00000586443 LCE3BQ5TA77 95 aa5.85□□□□□ -1.47
GRN-205ENST00000586443 KRTAP5-5Q701N2 237 aaPredicted RBP5.81□□□□□ -1.48
GRN-205ENST00000586443 MT1AP04731 61 aa5.72□□□□□ -1.49
GRN-205ENST00000586443 KRTAP6-1Q3LI64 71 aa5.63□□□□□ -1.51
GRN-205ENST00000586443 A0A0A0MQY5 61 aa5.6□□□□□ -1.51
GRN-205ENST00000586443 H3BS24 57 aa5.57□□□□□ -1.52
GRN-205ENST00000586443 KRTAP5-4Q6L8H1 288 aa5.55□□□□□ -1.52
GRN-205ENST00000586443 LCE4AQ5TA78 99 aa5.44□□□□□ -1.54
GRN-205ENST00000586443 SYNE1Q8NF91 8797 aaKnown RBP5.42□□□□□ -1.54
GRN-205ENST00000586443 KRTAP9-4Q9BYQ2 154 aa5.42□□□□□ -1.54
GRN-205ENST00000586443 KRTAP4-9Q9BYQ8 210 aa5.4□□□□□ -1.55
GRN-205ENST00000586443 KRTAP12-4P60329 112 aa5.38□□□□□ -1.55
GRN-205ENST00000586443 LCE1DQ5T752 114 aa5.29□□□□□ -1.56
GRN-205ENST00000586443 MT4P47944 62 aa5.28□□□□□ -1.56
GRN-205ENST00000586443 INE1O15225 51 aa5.27□□□□□ -1.57
GRN-205ENST00000586443 KRTAP4-6Q9BYQ5 205 aa5.23□□□□□ -1.57
GRN-205ENST00000586443 KRTAP6-2Q3LI66 62 aa5.18□□□□□ -1.58
GRN-205ENST00000586443 HMCN1Q96RW7 5635 aa5.18□□□□□ -1.58
GRN-205ENST00000586443 MT3P25713 68 aa5.17□□□□□ -1.58
GRN-205ENST00000586443 KRTAP20-2Q3LI61 65 aa5.16□□□□□ -1.58
GRN-205ENST00000586443 KRTAP5-2Q701N4 177 aa5.04□□□□□ -1.6
GRN-205ENST00000586443 GPR98Q8WXG9 6306 aa5□□□□□ -1.61
GRN-205ENST00000586443 LCE3DQ9BYE3 92 aa4.99□□□□□ -1.61
GRN-205ENST00000586443 KRTAP5-3Q6L8H2 238 aa4.98□□□□□ -1.61
GRN-205ENST00000586443 AHNAK2Q8IVF2 5795 aa4.9□□□□□ -1.63
GRN-205ENST00000586443 LCE3EQ5T5B0 92 aa4.87□□□□□ -1.63
GRN-205ENST00000586443 KRTAP5-10Q6L8G5 202 aa4.78□□□□□ -1.64
GRN-205ENST00000586443 OBSCNQ5VST9 7968 aa4.68□□□□□ -1.66
GRN-205ENST00000586443 KRTAP5-7Q6L8G8 165 aa4.56□□□□□ -1.68
GRN-205ENST00000586443 LCE1EQ5T753 118 aa4.51□□□□□ -1.69
GRN-205ENST00000586443 KRTAP4-11Q9BYQ6 195 aa4.48□□□□□ -1.69
GRN-205ENST00000586443 KRTAP5-1Q6L8H4 278 aa4.33□□□□□ -1.72
GRN-205ENST00000586443 KRTAP5-8O75690 187 aa4.32□□□□□ -1.72
GRN-205ENST00000586443 PRM1P04553 51 aa4.23□□□□□ -1.73
GRN-205ENST00000586443 LCE1CQ5T751 118 aa4.19□□□□□ -1.74
GRN-205ENST00000586443 LCE1BQ5T7P3 118 aa4.19□□□□□ -1.74
GRN-205ENST00000586443 KRTAP4-2Q9BYR5 136 aa4.18□□□□□ -1.74
GRN-205ENST00000586443 MUC5ACP98088 5654 aa4.12□□□□□ -1.75
GRN-205ENST00000586443 KRTAP9-9Q9BYP9 154 aa4.07□□□□□ -1.76
GRN-205ENST00000586443 MUC5BQ9HC84 5762 aaPredicted RBP4.01□□□□□ -1.77
GRN-205ENST00000586443 AHNAKQ09666 5890 aaKnown RBP3.96□□□□□ -1.78
GRN-205ENST00000586443 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.94□□□□□ -1.78
GRN-205ENST00000586443 KRTAP21-2Q3LI59 83 aa3.7□□□□□ -1.82
GRN-205ENST00000586443 KRTAP5-11Q6L8G4 156 aa3.7□□□□□ -1.82
GRN-205ENST00000586443 KRTAP4-12Q9BQ66 201 aa3.41□□□□□ -1.86
GRN-205ENST00000586443 LCE1FQ5T754 118 aa3.34□□□□□ -1.87
GRN-205ENST00000586443 KRTAP4-4Q9BYR3 166 aa3.23□□□□□ -1.89
GRN-205ENST00000586443 PHGR1C9JFL3 82 aa3.17□□□□□ -1.9
GRN-205ENST00000586443 MUC19Q7Z5P9 8384 aa2.72□□□□□ -1.97
GRN-205ENST00000586443 KRTAP21-1Q3LI58 79 aa2.61□□□□□ -1.99
GRN-205ENST00000586443 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 6.3 ms