RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 MT1EP04732 61 aa7.39□□□□□ -1.23
ATG4D-204ENST00000586417 SPRR5A0A1B0GTR4 108 aa7.34□□□□□ -1.23
ATG4D-204ENST00000586417 LCE1AQ5T7P2 110 aa7.25□□□□□ -1.25
ATG4D-204ENST00000586417 MT1LQ93083 61 aa7.25□□□□□ -1.25
ATG4D-204ENST00000586417 SPRR2EP22531 72 aa7.23□□□□□ -1.25
ATG4D-204ENST00000586417 SPRR2BP35325 72 aa7.23□□□□□ -1.25
ATG4D-204ENST00000586417 SPRR2AP35326 72 aa7.23□□□□□ -1.25
ATG4D-204ENST00000586417 LCE3CQ5T5A8 94 aa7.2□□□□□ -1.26
ATG4D-204ENST00000586417 NEBP20929 6669 aa7.19□□□□□ -1.26
ATG4D-204ENST00000586417 KRTAP19-3Q7Z4W3 81 aa7.15□□□□□ -1.27
ATG4D-204ENST00000586417 KRTAP19-4Q3LI73 84 aa7.13□□□□□ -1.27
ATG4D-204ENST00000586417 LCE5AQ5TCM9 118 aa7.09□□□□□ -1.27
ATG4D-204ENST00000586417 KRTAP4-7Q9BYR0 210 aa7.07□□□□□ -1.28
ATG4D-204ENST00000586417 MT1GP13640 62 aa7.04□□□□□ -1.28
ATG4D-204ENST00000586417 LUZP6Q538Z0 58 aa7.03□□□□□ -1.28
ATG4D-204ENST00000586417 NDUFAF8A1L188 74 aa7□□□□□ -1.29
ATG4D-204ENST00000586417 SPRR2DP22532 72 aa6.97□□□□□ -1.29
ATG4D-204ENST00000586417 MT1MQ8N339 61 aa6.97□□□□□ -1.29
ATG4D-204ENST00000586417 KRTAP9-6A8MVA2 160 aa6.87□□□□□ -1.31
ATG4D-204ENST00000586417 KRTAP4-3Q9BYR4 195 aa6.87□□□□□ -1.31
ATG4D-204ENST00000586417 DSTQ03001 7570 aaKnown RBP6.84□□□□□ -1.31
ATG4D-204ENST00000586417 LCE3BQ5TA77 95 aa6.74□□□□□ -1.33
ATG4D-204ENST00000586417 KRTAP2-3P0C7H8 128 aa6.72□□□□□ -1.33
ATG4D-204ENST00000586417 KRTAP20-1Q3LI63 56 aa6.72□□□□□ -1.33
ATG4D-204ENST00000586417 KRTAP2-4Q9BYR9 128 aa6.72□□□□□ -1.33
ATG4D-204ENST00000586417 LOC100996750A0A140TA64 210 aa6.63□□□□□ -1.35
ATG4D-204ENST00000586417 KRTAP2-2Q9BYT5 123 aa6.54□□□□□ -1.36
ATG4D-204ENST00000586417 KRTAP2-1Q9BYU5 128 aa6.54□□□□□ -1.36
ATG4D-204ENST00000586417 H3BS24 57 aa6.48□□□□□ -1.37
ATG4D-204ENST00000586417 KRTAP5-5Q701N2 237 aaPredicted RBP6.33□□□□□ -1.4
ATG4D-204ENST00000586417 KRTAP5-4Q6L8H1 288 aa6.22□□□□□ -1.41
ATG4D-204ENST00000586417 KRTAP4-9Q9BYQ8 210 aa6.16□□□□□ -1.42
ATG4D-204ENST00000586417 MT1AP04731 61 aa6.15□□□□□ -1.43
ATG4D-204ENST00000586417 LCE4AQ5TA78 99 aa6.15□□□□□ -1.43
ATG4D-204ENST00000586417 KRTAP6-1Q3LI64 71 aa6.12□□□□□ -1.43
ATG4D-204ENST00000586417 A0A0A0MQY5 61 aa6.1□□□□□ -1.43
ATG4D-204ENST00000586417 MT4P47944 62 aa6.1□□□□□ -1.43
ATG4D-204ENST00000586417 LCE1DQ5T752 114 aa6.06□□□□□ -1.44
ATG4D-204ENST00000586417 SYNE1Q8NF91 8797 aaKnown RBP6.03□□□□□ -1.44
ATG4D-204ENST00000586417 KRTAP4-6Q9BYQ5 205 aa6.03□□□□□ -1.44
ATG4D-204ENST00000586417 HMCN1Q96RW7 5635 aa6□□□□□ -1.45
ATG4D-204ENST00000586417 KRTAP12-4P60329 112 aa5.93□□□□□ -1.46
ATG4D-204ENST00000586417 KRTAP20-2Q3LI61 65 aa5.84□□□□□ -1.47
ATG4D-204ENST00000586417 KRTAP9-4Q9BYQ2 154 aa5.83□□□□□ -1.48
ATG4D-204ENST00000586417 INE1O15225 51 aa5.72□□□□□ -1.49
ATG4D-204ENST00000586417 KRTAP5-3Q6L8H2 238 aa5.65□□□□□ -1.5
ATG4D-204ENST00000586417 KRTAP6-2Q3LI66 62 aa5.65□□□□□ -1.51
ATG4D-204ENST00000586417 KRTAP5-2Q701N4 177 aa5.57□□□□□ -1.52
ATG4D-204ENST00000586417 MT3P25713 68 aa5.55□□□□□ -1.52
ATG4D-204ENST00000586417 AHNAK2Q8IVF2 5795 aa5.48□□□□□ -1.53
ATG4D-204ENST00000586417 LCE3DQ9BYE3 92 aa5.4□□□□□ -1.54
ATG4D-204ENST00000586417 OBSCNQ5VST9 7968 aa5.31□□□□□ -1.56
ATG4D-204ENST00000586417 LCE3EQ5T5B0 92 aa5.27□□□□□ -1.57
ATG4D-204ENST00000586417 KRTAP5-10Q6L8G5 202 aa5.25□□□□□ -1.57
ATG4D-204ENST00000586417 GPR98Q8WXG9 6306 aa5.24□□□□□ -1.57
ATG4D-204ENST00000586417 KRTAP4-11Q9BYQ6 195 aa5.16□□□□□ -1.58
ATG4D-204ENST00000586417 KRTAP5-8O75690 187 aa4.99□□□□□ -1.61
ATG4D-204ENST00000586417 KRTAP5-7Q6L8G8 165 aa4.91□□□□□ -1.62
ATG4D-204ENST00000586417 KRTAP5-1Q6L8H4 278 aa4.9□□□□□ -1.63
ATG4D-204ENST00000586417 LCE1EQ5T753 118 aa4.86□□□□□ -1.63
ATG4D-204ENST00000586417 MUC5ACP98088 5654 aa4.75□□□□□ -1.65
ATG4D-204ENST00000586417 PRM1P04553 51 aa4.65□□□□□ -1.66
ATG4D-204ENST00000586417 LCE1BQ5T7P3 118 aa4.61□□□□□ -1.67
ATG4D-204ENST00000586417 KRTAP4-2Q9BYR5 136 aa4.6□□□□□ -1.67
ATG4D-204ENST00000586417 LCE1CQ5T751 118 aa4.55□□□□□ -1.68
ATG4D-204ENST00000586417 KRTAP9-9Q9BYP9 154 aa4.55□□□□□ -1.68
ATG4D-204ENST00000586417 MUC5BQ9HC84 5762 aaPredicted RBP4.45□□□□□ -1.7
ATG4D-204ENST00000586417 AHNAKQ09666 5890 aaKnown RBP4.26□□□□□ -1.73
ATG4D-204ENST00000586417 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.22□□□□□ -1.73
ATG4D-204ENST00000586417 KRTAP5-11Q6L8G4 156 aa4.04□□□□□ -1.76
ATG4D-204ENST00000586417 KRTAP21-2Q3LI59 83 aa4.01□□□□□ -1.77
ATG4D-204ENST00000586417 KRTAP4-12Q9BQ66 201 aa3.97□□□□□ -1.77
ATG4D-204ENST00000586417 LCE1FQ5T754 118 aa3.72□□□□□ -1.81
ATG4D-204ENST00000586417 KRTAP4-4Q9BYR3 166 aa3.6□□□□□ -1.83
ATG4D-204ENST00000586417 PHGR1C9JFL3 82 aa3.49□□□□□ -1.85
ATG4D-204ENST00000586417 MUC19Q7Z5P9 8384 aa3.21□□□□□ -1.9
ATG4D-204ENST00000586417 KRTAP21-1Q3LI58 79 aa2.87□□□□□ -1.95
ATG4D-204ENST00000586417 MUC16Q8WXI7 14507 aa2.22□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 98 ms