RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 MT1MQ8N339 61 aa4.27□□□□□ -1.73
BRCA1-225ENST00000586385 UQCR11O14957 56 aa4.23□□□□□ -1.73
BRCA1-225ENST00000586385 KRTAP4-3Q9BYR4 195 aa4.23□□□□□ -1.73
BRCA1-225ENST00000586385 A0A0D9SG42 100 aa4.21□□□□□ -1.74
BRCA1-225ENST00000586385 PP632Q6XCG6 107 aa4.21□□□□□ -1.74
BRCA1-225ENST00000586385 MT1LQ93083 61 aa4.21□□□□□ -1.74
BRCA1-225ENST00000586385 A0A1B0GU33 70 aa4.19□□□□□ -1.74
BRCA1-225ENST00000586385 KRTAP5-7Q6L8G8 165 aa4.19□□□□□ -1.74
BRCA1-225ENST00000586385 PSPHP1O15172 72 aa4.18□□□□□ -1.74
BRCA1-225ENST00000586385 A6NED7 52 aa4.16□□□□□ -1.74
BRCA1-225ENST00000586385 K7ERS5 55 aa4.14□□□□□ -1.75
BRCA1-225ENST00000586385 KRTAP5-3Q6L8H2 238 aa4.14□□□□□ -1.75
BRCA1-225ENST00000586385 MIR22HGQ0VDD5 57 aa4.11□□□□□ -1.75
BRCA1-225ENST00000586385 CDC42SE1Q9NRR8 79 aa4.08□□□□□ -1.76
BRCA1-225ENST00000586385 SPATA8Q6RVD6 105 aa4.07□□□□□ -1.76
BRCA1-225ENST00000586385 KRTAP12-1P59990 96 aa4.04□□□□□ -1.76
BRCA1-225ENST00000586385 KRTAP4-7Q9BYR0 210 aa4.04□□□□□ -1.76
BRCA1-225ENST00000586385 C10orf95Q9H7T3 257 aa4.04□□□□□ -1.76
BRCA1-225ENST00000586385 KRTAP20-2Q3LI61 65 aa4.03□□□□□ -1.76
BRCA1-225ENST00000586385 LCE3AQ5TA76 89 aa4.03□□□□□ -1.76
BRCA1-225ENST00000586385 SPINT4Q6UDR6 99 aa4.03□□□□□ -1.76
BRCA1-225ENST00000586385 BRK1Q8WUW1 75 aa4.03□□□□□ -1.76
BRCA1-225ENST00000586385 KRTAP5-5Q701N2 237 aaPredicted RBP3.98□□□□□ -1.77
BRCA1-225ENST00000586385 PRO0628Q9UI54 55 aa3.97□□□□□ -1.77
BRCA1-225ENST00000586385 SPRR5A0A1B0GTR4 108 aa3.95□□□□□ -1.78
BRCA1-225ENST00000586385 A8MU10 97 aa3.87□□□□□ -1.79
BRCA1-225ENST00000586385 TNP1P09430 55 aa3.86□□□□□ -1.79
BRCA1-225ENST00000586385 PMAIP1Q13794 54 aa3.86□□□□□ -1.79
BRCA1-225ENST00000586385 SVIPQ8NHG7 77 aa3.86□□□□□ -1.79
BRCA1-225ENST00000586385 KRTAP12-4P60329 112 aa3.85□□□□□ -1.79
BRCA1-225ENST00000586385 KRTAP12-3P60328 96 aa3.84□□□□□ -1.79
BRCA1-225ENST00000586385 ROMO1P60602 79 aa3.78□□□□□ -1.8
BRCA1-225ENST00000586385 SYNE1Q8NF91 8797 aaKnown RBP3.78□□□□□ -1.8
BRCA1-225ENST00000586385 KRTAP4-12Q9BQ66 201 aa3.76□□□□□ -1.81
BRCA1-225ENST00000586385 KRTAP4-11Q9BYQ6 195 aa3.75□□□□□ -1.81
BRCA1-225ENST00000586385 KRTAP9-9Q9BYP9 154 aa3.74□□□□□ -1.81
BRCA1-225ENST00000586385 KRTAP9-4Q9BYQ2 154 aa3.74□□□□□ -1.81
BRCA1-225ENST00000586385 KRTAP25-1Q3LHN0 102 aa3.73□□□□□ -1.81
BRCA1-225ENST00000586385 KRTAP5-2Q701N4 177 aa3.69□□□□□ -1.82
BRCA1-225ENST00000586385 KTN1-AS1Q86SY8 53 aa3.67□□□□□ -1.82
BRCA1-225ENST00000586385 AHNAKQ09666 5890 aaKnown RBP3.67□□□□□ -1.82
BRCA1-225ENST00000586385 KRTAP23-1A1A580 65 aa3.66□□□□□ -1.82
BRCA1-225ENST00000586385 MUC5ACP98088 5654 aa3.66□□□□□ -1.82
BRCA1-225ENST00000586385 KRTAP5-8O75690 187 aa3.65□□□□□ -1.83
BRCA1-225ENST00000586385 MUC5BQ9HC84 5762 aaPredicted RBP3.62□□□□□ -1.83
BRCA1-225ENST00000586385 KRTAP6-1Q3LI64 71 aa3.6□□□□□ -1.83
BRCA1-225ENST00000586385 MT1AP04731 61 aa3.56□□□□□ -1.84
BRCA1-225ENST00000586385 KRTAP19-4Q3LI73 84 aa3.53□□□□□ -1.84
BRCA1-225ENST00000586385 H3BS24 57 aa3.52□□□□□ -1.85
BRCA1-225ENST00000586385 LCE3CQ5T5A8 94 aa3.51□□□□□ -1.85
BRCA1-225ENST00000586385 KRTAP15-1Q3LI76 137 aa3.48□□□□□ -1.85
BRCA1-225ENST00000586385 KRTAP6-2Q3LI66 62 aa3.47□□□□□ -1.85
BRCA1-225ENST00000586385 KRTAP4-2Q9BYR5 136 aa3.47□□□□□ -1.85
BRCA1-225ENST00000586385 OBSCNQ5VST9 7968 aa3.43□□□□□ -1.86
BRCA1-225ENST00000586385 KRTAP9-6A8MVA2 160 aa3.41□□□□□ -1.86
BRCA1-225ENST00000586385 PRAC1Q96KF2 57 aa3.41□□□□□ -1.86
BRCA1-225ENST00000586385 KRTAP5-1Q6L8H4 278 aa3.38□□□□□ -1.87
BRCA1-225ENST00000586385 MT3P25713 68 aa3.24□□□□□ -1.89
BRCA1-225ENST00000586385 LUZP6Q538Z0 58 aa3.13□□□□□ -1.91
BRCA1-225ENST00000586385 LCE1EQ5T753 118 aa3.06□□□□□ -1.92
BRCA1-225ENST00000586385 LCE1BQ5T7P3 118 aa2.91□□□□□ -1.94
BRCA1-225ENST00000586385 A0A0A0MQY5 61 aa2.85□□□□□ -1.95
BRCA1-225ENST00000586385 LCE1CQ5T751 118 aa2.85□□□□□ -1.95
BRCA1-225ENST00000586385 NDUFAF8A1L188 74 aa2.77□□□□□ -1.97
BRCA1-225ENST00000586385 KRTAP5-11Q6L8G4 156 aa2.67□□□□□ -1.98
BRCA1-225ENST00000586385 LCE1FQ5T754 118 aa2.58□□□□□ -2
BRCA1-225ENST00000586385 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.57□□□□□ -2
BRCA1-225ENST00000586385 PHGR1C9JFL3 82 aa2.49□□□□□ -2.01
BRCA1-225ENST00000586385 INE1O15225 51 aa2.48□□□□□ -2.01
BRCA1-225ENST00000586385 LCE3DQ9BYE3 92 aa2.44□□□□□ -2.02
BRCA1-225ENST00000586385 KRTAP21-2Q3LI59 83 aa2.38□□□□□ -2.03
BRCA1-225ENST00000586385 LCE3EQ5T5B0 92 aa2.29□□□□□ -2.04
BRCA1-225ENST00000586385 KRTAP4-4Q9BYR3 166 aa2.23□□□□□ -2.05
BRCA1-225ENST00000586385 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
BRCA1-225ENST00000586385 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
BRCA1-225ENST00000586385 PRM1P04553 51 aa1.88□□□□□ -2.11
BRCA1-225ENST00000586385 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 31.3 ms