RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 NEBP20929 6669 aa5.13□□□□□ -1.59
VMP1-203ENST00000586245 LCE4AQ5TA78 99 aa5.1□□□□□ -1.59
VMP1-203ENST00000586245 LCE1DQ5T752 114 aa5.09□□□□□ -1.59
VMP1-203ENST00000586245 KRTAP19-5Q3LI72 72 aa5.07□□□□□ -1.6
VMP1-203ENST00000586245 KRTAP19-7Q3SYF9 63 aa5.07□□□□□ -1.6
VMP1-203ENST00000586245 SPRR2EP22531 72 aa5.05□□□□□ -1.6
VMP1-203ENST00000586245 SPRR2BP35325 72 aa5.05□□□□□ -1.6
VMP1-203ENST00000586245 SPRR2AP35326 72 aa5.05□□□□□ -1.6
VMP1-203ENST00000586245 SVIPQ8NHG7 77 aa5.05□□□□□ -1.6
VMP1-203ENST00000586245 KRTAP23-1A1A580 65 aa5.03□□□□□ -1.6
VMP1-203ENST00000586245 MT1EP04732 61 aa5.02□□□□□ -1.61
VMP1-203ENST00000586245 LCE1AQ5T7P2 110 aa5.01□□□□□ -1.61
VMP1-203ENST00000586245 PRAC1Q96KF2 57 aa4.99□□□□□ -1.61
VMP1-203ENST00000586245 KRTAP4-7Q9BYR0 210 aa4.99□□□□□ -1.61
VMP1-203ENST00000586245 KRTAP12-3P60328 96 aa4.96□□□□□ -1.62
VMP1-203ENST00000586245 PP632Q6XCG6 107 aa4.96□□□□□ -1.62
VMP1-203ENST00000586245 KRTAP19-3Q7Z4W3 81 aa4.91□□□□□ -1.62
VMP1-203ENST00000586245 KRTAP4-9Q9BYQ8 210 aa4.91□□□□□ -1.62
VMP1-203ENST00000586245 SPRR2DP22532 72 aa4.88□□□□□ -1.63
VMP1-203ENST00000586245 MT1LQ93083 61 aa4.87□□□□□ -1.63
VMP1-203ENST00000586245 LCE5AQ5TCM9 118 aa4.85□□□□□ -1.63
VMP1-203ENST00000586245 MT1GP13640 62 aa4.84□□□□□ -1.63
VMP1-203ENST00000586245 KRTAP20-1Q3LI63 56 aa4.79□□□□□ -1.64
VMP1-203ENST00000586245 KRTAP4-2Q9BYR5 136 aa4.78□□□□□ -1.64
VMP1-203ENST00000586245 KRTAP2-3P0C7H8 128 aa4.77□□□□□ -1.65
VMP1-203ENST00000586245 KRTAP15-1Q3LI76 137 aa4.77□□□□□ -1.65
VMP1-203ENST00000586245 KRTAP2-4Q9BYR9 128 aa4.77□□□□□ -1.65
VMP1-203ENST00000586245 KRTAP4-11Q9BYQ6 195 aa4.76□□□□□ -1.65
VMP1-203ENST00000586245 MT1MQ8N339 61 aa4.75□□□□□ -1.65
VMP1-203ENST00000586245 DSTQ03001 7570 aaKnown RBP4.74□□□□□ -1.65
VMP1-203ENST00000586245 KRTAP2-2Q9BYT5 123 aa4.64□□□□□ -1.67
VMP1-203ENST00000586245 KRTAP2-1Q9BYU5 128 aa4.64□□□□□ -1.67
VMP1-203ENST00000586245 KRTAP4-3Q9BYR4 195 aa4.62□□□□□ -1.67
VMP1-203ENST00000586245 LCE3CQ5T5A8 94 aa4.6□□□□□ -1.67
VMP1-203ENST00000586245 KRTAP5-3Q6L8H2 238 aa4.43□□□□□ -1.7
VMP1-203ENST00000586245 KRTAP9-6A8MVA2 160 aa4.3□□□□□ -1.72
VMP1-203ENST00000586245 KRTAP5-5Q701N2 237 aaPredicted RBP4.3□□□□□ -1.72
VMP1-203ENST00000586245 KRTAP5-4Q6L8H1 288 aa4.29□□□□□ -1.72
VMP1-203ENST00000586245 SPRR5A0A1B0GTR4 108 aa4.24□□□□□ -1.73
VMP1-203ENST00000586245 MT4P47944 62 aa4.23□□□□□ -1.73
VMP1-203ENST00000586245 LUZP6Q538Z0 58 aa4.23□□□□□ -1.73
VMP1-203ENST00000586245 HMCN1Q96RW7 5635 aa4.17□□□□□ -1.74
VMP1-203ENST00000586245 SYNE1Q8NF91 8797 aaKnown RBP4.16□□□□□ -1.74
VMP1-203ENST00000586245 MT1AP04731 61 aa4.15□□□□□ -1.75
VMP1-203ENST00000586245 KRTAP12-4P60329 112 aa4.14□□□□□ -1.75
VMP1-203ENST00000586245 A0A0A0MQY5 61 aa4.12□□□□□ -1.75
VMP1-203ENST00000586245 KRTAP6-1Q3LI64 71 aa4.09□□□□□ -1.75
VMP1-203ENST00000586245 KRTAP20-2Q3LI61 65 aa4.04□□□□□ -1.76
VMP1-203ENST00000586245 NDUFAF8A1L188 74 aa4.01□□□□□ -1.77
VMP1-203ENST00000586245 GPR98Q8WXG9 6306 aa4□□□□□ -1.77
VMP1-203ENST00000586245 AHNAK2Q8IVF2 5795 aa3.91□□□□□ -1.78
VMP1-203ENST00000586245 KRTAP6-2Q3LI66 62 aa3.84□□□□□ -1.79
VMP1-203ENST00000586245 KRTAP5-2Q701N4 177 aa3.82□□□□□ -1.8
VMP1-203ENST00000586245 MT3P25713 68 aa3.8□□□□□ -1.8
VMP1-203ENST00000586245 KRTAP5-10Q6L8G5 202 aa3.69□□□□□ -1.82
VMP1-203ENST00000586245 OBSCNQ5VST9 7968 aa3.65□□□□□ -1.83
VMP1-203ENST00000586245 KRTAP5-7Q6L8G8 165 aa3.51□□□□□ -1.85
VMP1-203ENST00000586245 KRTAP5-8O75690 187 aa3.45□□□□□ -1.86
VMP1-203ENST00000586245 LCE3DQ9BYE3 92 aa3.41□□□□□ -1.86
VMP1-203ENST00000586245 INE1O15225 51 aa3.4□□□□□ -1.87
VMP1-203ENST00000586245 LCE1EQ5T753 118 aa3.38□□□□□ -1.87
VMP1-203ENST00000586245 KRTAP5-1Q6L8H4 278 aa3.36□□□□□ -1.87
VMP1-203ENST00000586245 MUC5ACP98088 5654 aa3.36□□□□□ -1.87
VMP1-203ENST00000586245 LCE3EQ5T5B0 92 aa3.27□□□□□ -1.89
VMP1-203ENST00000586245 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.25□□□□□ -1.89
VMP1-203ENST00000586245 KRTAP5-11Q6L8G4 156 aa3.21□□□□□ -1.9
VMP1-203ENST00000586245 LCE1BQ5T7P3 118 aa3.17□□□□□ -1.9
VMP1-203ENST00000586245 MUC5BQ9HC84 5762 aaPredicted RBP3.16□□□□□ -1.9
VMP1-203ENST00000586245 AHNAKQ09666 5890 aaKnown RBP3.14□□□□□ -1.91
VMP1-203ENST00000586245 LCE1CQ5T751 118 aa3.13□□□□□ -1.91
VMP1-203ENST00000586245 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
VMP1-203ENST00000586245 KRTAP4-4Q9BYR3 166 aa2.72□□□□□ -1.97
VMP1-203ENST00000586245 PRM1P04553 51 aa2.69□□□□□ -1.98
VMP1-203ENST00000586245 KRTAP21-2Q3LI59 83 aa2.68□□□□□ -1.98
VMP1-203ENST00000586245 PHGR1C9JFL3 82 aa2.4□□□□□ -2.03
VMP1-203ENST00000586245 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
VMP1-203ENST00000586245 KRTAP21-1Q3LI58 79 aa1.64□□□□□ -2.15
VMP1-203ENST00000586245 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 94.1 ms