RNA–Protein interactions for RNA: ENST00000586083.5

RNFT1-208, Transcript of ring finger protein, transmembrane 1, human

TSL 2

Gene RNFT1, Length 1,425 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNFT1-208	ENST00000586083	SPATA8	Q6RVD6	105 aa		4.27	□□□□□ -1.73
RNFT1-208	ENST00000586083	ANAPC13	Q9BS18	74 aa		4.26	□□□□□ -1.73
RNFT1-208	ENST00000586083		A0A1B0GU33	70 aa		4.24	□□□□□ -1.73
RNFT1-208	ENST00000586083	KRTAP12-1	P59990	96 aa		4.21	□□□□□ -1.74
RNFT1-208	ENST00000586083	MT4	P47944	62 aa		4.2	□□□□□ -1.74
RNFT1-208	ENST00000586083	MT1M	Q8N339	61 aa		4.19	□□□□□ -1.74
RNFT1-208	ENST00000586083	MT1L	Q93083	61 aa		4.16	□□□□□ -1.74
RNFT1-208	ENST00000586083	HMCN1	Q96RW7	5635 aa		4.15	□□□□□ -1.75
RNFT1-208	ENST00000586083	SMIM26	A0A096LP01	95 aa		4.14	□□□□□ -1.75
RNFT1-208	ENST00000586083	CCDC179	H3BU77	68 aa		4.13	□□□□□ -1.75
RNFT1-208	ENST00000586083		A0A1B0GU69	56 aa		4.11	□□□□□ -1.75
RNFT1-208	ENST00000586083	TNP1	P09430	55 aa		4.11	□□□□□ -1.75
RNFT1-208	ENST00000586083	C10orf95	Q9H7T3	257 aa		4.11	□□□□□ -1.75
RNFT1-208	ENST00000586083	COX7C	P15954	63 aa		4.09	□□□□□ -1.75
RNFT1-208	ENST00000586083	LCE3A	Q5TA76	89 aa		4.09	□□□□□ -1.75
RNFT1-208	ENST00000586083	KRTAP5-4	Q6L8H1	288 aa		4.08	□□□□□ -1.76
RNFT1-208	ENST00000586083	KRTAP5-1	Q6L8H4	278 aa		4.08	□□□□□ -1.76
RNFT1-208	ENST00000586083	KRTAP4-3	Q9BYR4	195 aa		4.08	□□□□□ -1.76
RNFT1-208	ENST00000586083		A8MU10	97 aa		4.06	□□□□□ -1.76
RNFT1-208	ENST00000586083		H7BZZ5	65 aa		4.05	□□□□□ -1.76
RNFT1-208	ENST00000586083	AHNAK2	Q8IVF2	5795 aa		4.04	□□□□□ -1.76
RNFT1-208	ENST00000586083	MT3	P25713	68 aa		4.03	□□□□□ -1.76
RNFT1-208	ENST00000586083	KRTAP5-10	Q6L8G5	202 aa		4.03	□□□□□ -1.76
RNFT1-208	ENST00000586083	TMEM258	P61165	79 aa		4	□□□□□ -1.77
RNFT1-208	ENST00000586083	KRTAP12-3	P60328	96 aa		3.95	□□□□□ -1.78
RNFT1-208	ENST00000586083	PRR15L	Q9BU68	103 aa		3.95	□□□□□ -1.78
RNFT1-208	ENST00000586083	KRTAP4-4	Q9BYR3	166 aa		3.94	□□□□□ -1.78
RNFT1-208	ENST00000586083	RPS28	P62857	69 aa	Known RBP	3.91	□□□□□ -1.78
RNFT1-208	ENST00000586083	ATP5E	P56381	51 aa	Predicted RBP	3.9	□□□□□ -1.78
RNFT1-208	ENST00000586083	KRTAP5-7	Q6L8G8	165 aa		3.9	□□□□□ -1.78
RNFT1-208	ENST00000586083	KRTAP20-2	Q3LI61	65 aa		3.87	□□□□□ -1.79
RNFT1-208	ENST00000586083	SPRR5	A0A1B0GTR4	108 aa		3.86	□□□□□ -1.79
RNFT1-208	ENST00000586083	KRTAP12-4	P60329	112 aa		3.85	□□□□□ -1.79
RNFT1-208	ENST00000586083	SVIP	Q8NHG7	77 aa		3.85	□□□□□ -1.79
RNFT1-208	ENST00000586083	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.84	□□□□□ -1.79
RNFT1-208	ENST00000586083	LINC01558	Q9Y6Z2	57 aa		3.81	□□□□□ -1.8
RNFT1-208	ENST00000586083	UQCR11	O14957	56 aa		3.79	□□□□□ -1.8
RNFT1-208	ENST00000586083	KRTAP9-6	A8MVA2	160 aa		3.78	□□□□□ -1.8
RNFT1-208	ENST00000586083	KRTAP25-1	Q3LHN0	102 aa		3.78	□□□□□ -1.8
RNFT1-208	ENST00000586083		A0A0A0MQY5	61 aa		3.73	□□□□□ -1.81
RNFT1-208	ENST00000586083		K7ERS5	55 aa		3.7	□□□□□ -1.82
RNFT1-208	ENST00000586083	MIR22HG	Q0VDD5	57 aa		3.69	□□□□□ -1.82
RNFT1-208	ENST00000586083		V9GYY9	64 aa		3.67	□□□□□ -1.82
RNFT1-208	ENST00000586083		Q1T7F1	81 aa		3.64	□□□□□ -1.83
RNFT1-208	ENST00000586083	BRK1	Q8WUW1	75 aa		3.64	□□□□□ -1.83
RNFT1-208	ENST00000586083	PRO0628	Q9UI54	55 aa		3.64	□□□□□ -1.83
RNFT1-208	ENST00000586083	SYNE1	Q8NF91	8797 aa	Known RBP	3.63	□□□□□ -1.83
RNFT1-208	ENST00000586083	LCE3C	Q5T5A8	94 aa		3.61	□□□□□ -1.83
RNFT1-208	ENST00000586083	PSPHP1	O15172	72 aa		3.6	□□□□□ -1.83
RNFT1-208	ENST00000586083	MT1A	P04731	61 aa		3.55	□□□□□ -1.84
RNFT1-208	ENST00000586083	KRTAP5-2	Q701N4	177 aa		3.54	□□□□□ -1.84
RNFT1-208	ENST00000586083	KRTAP6-1	Q3LI64	71 aa		3.53	□□□□□ -1.85
RNFT1-208	ENST00000586083		A6NED7	52 aa		3.52	□□□□□ -1.85
RNFT1-208	ENST00000586083	LCE1F	Q5T754	118 aa		3.52	□□□□□ -1.85
RNFT1-208	ENST00000586083	OBSCN	Q5VST9	7968 aa		3.51	□□□□□ -1.85
RNFT1-208	ENST00000586083	CDC42SE1	Q9NRR8	79 aa		3.46	□□□□□ -1.86
RNFT1-208	ENST00000586083	KRTAP5-8	O75690	187 aa		3.45	□□□□□ -1.86
RNFT1-208	ENST00000586083	PMAIP1	Q13794	54 aa		3.43	□□□□□ -1.86
RNFT1-208	ENST00000586083	KRTAP6-2	Q3LI66	62 aa		3.42	□□□□□ -1.86
RNFT1-208	ENST00000586083	MUC5AC	P98088	5654 aa		3.39	□□□□□ -1.87
RNFT1-208	ENST00000586083	AHNAK	Q09666	5890 aa	Known RBP	3.38	□□□□□ -1.87
RNFT1-208	ENST00000586083	ROMO1	P60602	79 aa		3.36	□□□□□ -1.87
RNFT1-208	ENST00000586083	KTN1-AS1	Q86SY8	53 aa		3.36	□□□□□ -1.87
RNFT1-208	ENST00000586083	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.35	□□□□□ -1.87
RNFT1-208	ENST00000586083	NDUFAF8	A1L188	74 aa		3.2	□□□□□ -1.9
RNFT1-208	ENST00000586083	PRAC1	Q96KF2	57 aa		3.19	□□□□□ -1.9
RNFT1-208	ENST00000586083	LCE3E	Q5T5B0	92 aa		3.02	□□□□□ -1.93
RNFT1-208	ENST00000586083	LCE1B	Q5T7P3	118 aa		2.89	□□□□□ -1.95
RNFT1-208	ENST00000586083	LCE1C	Q5T751	118 aa		2.85	□□□□□ -1.95
RNFT1-208	ENST00000586083	LUZP6	Q538Z0	58 aa		2.6	□□□□□ -1.99
RNFT1-208	ENST00000586083	LCE3D	Q9BYE3	92 aa		2.59	□□□□□ -2
RNFT1-208	ENST00000586083	MUC19	Q7Z5P9	8384 aa		2.38	□□□□□ -2.03
RNFT1-208	ENST00000586083	PHGR1	C9JFL3	82 aa		2.38	□□□□□ -2.03
RNFT1-208	ENST00000586083	KRTAP21-2	Q3LI59	83 aa		2.32	□□□□□ -2.04
RNFT1-208	ENST00000586083	INE1	O15225	51 aa		2.21	□□□□□ -2.06
RNFT1-208	ENST00000586083	KRTAP21-1	Q3LI58	79 aa		1.82	□□□□□ -2.12
RNFT1-208	ENST00000586083	PRM1	P04553	51 aa		1.69	□□□□□ -2.14
RNFT1-208	ENST00000586083	MUC16	Q8WXI7	14507 aa		1.45	□□□□□ -2.18

Retrieved 78 of 20,778 RNA–protein pairs in 62.5 ms