RNA–Protein interactions for RNA: ENST00000585630.5

CIRBP-204, Transcript of cold inducible RNA binding protein, human

APPRIS P3 TSL 3 BASIC

Gene CIRBP, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-204	ENST00000585630	KRTAP19-5	Q3LI72	72 aa		6.03	□□□□□ -1.44
CIRBP-204	ENST00000585630	DST	Q03001	7570 aa	Known RBP	5.99	□□□□□ -1.45
CIRBP-204	ENST00000585630	TNP1	P09430	55 aa		5.96	□□□□□ -1.46
CIRBP-204	ENST00000585630	MT1G	P13640	62 aa		5.95	□□□□□ -1.46
CIRBP-204	ENST00000585630	ROMO1	P60602	79 aa		5.95	□□□□□ -1.46
CIRBP-204	ENST00000585630	LCE3A	Q5TA76	89 aa		5.91	□□□□□ -1.46
CIRBP-204	ENST00000585630	PP632	Q6XCG6	107 aa		5.91	□□□□□ -1.46
CIRBP-204	ENST00000585630	PRO0628	Q9UI54	55 aa		5.91	□□□□□ -1.46
CIRBP-204	ENST00000585630	KRTAP25-1	Q3LHN0	102 aa		5.88	□□□□□ -1.47
CIRBP-204	ENST00000585630	MT1L	Q93083	61 aa		5.88	□□□□□ -1.47
CIRBP-204	ENST00000585630	MT1M	Q8N339	61 aa		5.87	□□□□□ -1.47
CIRBP-204	ENST00000585630	LOC100996750	A0A140TA64	210 aa		5.85	□□□□□ -1.47
CIRBP-204	ENST00000585630	KRTAP4-6	Q9BYQ5	205 aa		5.85	□□□□□ -1.47
CIRBP-204	ENST00000585630	KRTAP4-9	Q9BYQ8	210 aa		5.85	□□□□□ -1.47
CIRBP-204	ENST00000585630	PMAIP1	Q13794	54 aa		5.84	□□□□□ -1.47
CIRBP-204	ENST00000585630	GPR98	Q8WXG9	6306 aa		5.79	□□□□□ -1.48
CIRBP-204	ENST00000585630	LCE4A	Q5TA78	99 aa		5.72	□□□□□ -1.49
CIRBP-204	ENST00000585630	LCE1D	Q5T752	114 aa		5.71	□□□□□ -1.5
CIRBP-204	ENST00000585630	KRTAP4-3	Q9BYR4	195 aa		5.7	□□□□□ -1.5
CIRBP-204	ENST00000585630	KRTAP23-1	A1A580	65 aa		5.69	□□□□□ -1.5
CIRBP-204	ENST00000585630	KRTAP12-3	P60328	96 aa		5.68	□□□□□ -1.5
CIRBP-204	ENST00000585630	MT4	P47944	62 aa		5.65	□□□□□ -1.5
CIRBP-204	ENST00000585630	HMCN1	Q96RW7	5635 aa		5.62	□□□□□ -1.51
CIRBP-204	ENST00000585630	KRTAP5-4	Q6L8H1	288 aa		5.61	□□□□□ -1.51
CIRBP-204	ENST00000585630	KRTAP4-7	Q9BYR0	210 aa		5.57	□□□□□ -1.52
CIRBP-204	ENST00000585630	PRAC1	Q96KF2	57 aa		5.53	□□□□□ -1.52
CIRBP-204	ENST00000585630	KTN1-AS1	Q86SY8	53 aa		5.52	□□□□□ -1.53
CIRBP-204	ENST00000585630	AHNAK2	Q8IVF2	5795 aa		5.47	□□□□□ -1.53
CIRBP-204	ENST00000585630	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.4	□□□□□ -1.54
CIRBP-204	ENST00000585630	KRTAP19-4	Q3LI73	84 aa		5.36	□□□□□ -1.55
CIRBP-204	ENST00000585630	KRTAP15-1	Q3LI76	137 aa		5.35	□□□□□ -1.55
CIRBP-204	ENST00000585630	KRTAP5-10	Q6L8G5	202 aa		5.33	□□□□□ -1.56
CIRBP-204	ENST00000585630	KRTAP20-2	Q3LI61	65 aa		5.29	□□□□□ -1.56
CIRBP-204	ENST00000585630	SPRR5	A0A1B0GTR4	108 aa		5.26	□□□□□ -1.57
CIRBP-204	ENST00000585630	KRTAP12-4	P60329	112 aa		5.25	□□□□□ -1.57
CIRBP-204	ENST00000585630	LCE3C	Q5T5A8	94 aa		5.21	□□□□□ -1.58
CIRBP-204	ENST00000585630	KRTAP5-3	Q6L8H2	238 aa		5.21	□□□□□ -1.58
CIRBP-204	ENST00000585630	SVIP	Q8NHG7	77 aa		5.21	□□□□□ -1.58
CIRBP-204	ENST00000585630	KRTAP5-7	Q6L8G8	165 aa		5.15	□□□□□ -1.59
CIRBP-204	ENST00000585630	SYNE1	Q8NF91	8797 aa	Known RBP	5.09	□□□□□ -1.59
CIRBP-204	ENST00000585630	KRTAP4-12	Q9BQ66	201 aa		5.05	□□□□□ -1.6
CIRBP-204	ENST00000585630	MT1A	P04731	61 aa		5.01	□□□□□ -1.61
CIRBP-204	ENST00000585630	KRTAP6-1	Q3LI64	71 aa		4.97	□□□□□ -1.61
CIRBP-204	ENST00000585630	KRTAP9-9	Q9BYP9	154 aa		4.97	□□□□□ -1.61
CIRBP-204	ENST00000585630	KRTAP9-4	Q9BYQ2	154 aa		4.97	□□□□□ -1.61
CIRBP-204	ENST00000585630	KRTAP9-6	A8MVA2	160 aa		4.94	□□□□□ -1.62
CIRBP-204	ENST00000585630	KRTAP5-2	Q701N4	177 aa		4.93	□□□□□ -1.62
CIRBP-204	ENST00000585630	KRTAP4-11	Q9BYQ6	195 aa		4.83	□□□□□ -1.64
CIRBP-204	ENST00000585630		H3BS24	57 aa		4.77	□□□□□ -1.65
CIRBP-204	ENST00000585630	KRTAP6-2	Q3LI66	62 aa		4.74	□□□□□ -1.65
CIRBP-204	ENST00000585630	KRTAP5-8	O75690	187 aa		4.67	□□□□□ -1.66
CIRBP-204	ENST00000585630	MT3	P25713	68 aa		4.56	□□□□□ -1.68
CIRBP-204	ENST00000585630	KRTAP4-2	Q9BYR5	136 aa		4.56	□□□□□ -1.68
CIRBP-204	ENST00000585630	OBSCN	Q5VST9	7968 aa		4.55	□□□□□ -1.68
CIRBP-204	ENST00000585630	LUZP6	Q538Z0	58 aa		4.52	□□□□□ -1.69
CIRBP-204	ENST00000585630	AHNAK	Q09666	5890 aa	Known RBP	4.52	□□□□□ -1.69
CIRBP-204	ENST00000585630	MUC5AC	P98088	5654 aa		4.5	□□□□□ -1.69
CIRBP-204	ENST00000585630	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.49	□□□□□ -1.69
CIRBP-204	ENST00000585630	KRTAP5-1	Q6L8H4	278 aa		4.41	□□□□□ -1.7
CIRBP-204	ENST00000585630	NDUFAF8	A1L188	74 aa		4.23	□□□□□ -1.73
CIRBP-204	ENST00000585630	LCE1E	Q5T753	118 aa		4.21	□□□□□ -1.74
CIRBP-204	ENST00000585630	LCE1B	Q5T7P3	118 aa		3.95	□□□□□ -1.78
CIRBP-204	ENST00000585630	LCE1C	Q5T751	118 aa		3.91	□□□□□ -1.78
CIRBP-204	ENST00000585630		A0A0A0MQY5	61 aa		3.82	□□□□□ -1.8
CIRBP-204	ENST00000585630	LCE3D	Q9BYE3	92 aa		3.81	□□□□□ -1.8
CIRBP-204	ENST00000585630	LCE3E	Q5T5B0	92 aa		3.68	□□□□□ -1.82
CIRBP-204	ENST00000585630	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.58	□□□□□ -1.84
CIRBP-204	ENST00000585630	KRTAP5-11	Q6L8G4	156 aa		3.57	□□□□□ -1.84
CIRBP-204	ENST00000585630	INE1	O15225	51 aa		3.48	□□□□□ -1.85
CIRBP-204	ENST00000585630	LCE1F	Q5T754	118 aa		3.46	□□□□□ -1.86
CIRBP-204	ENST00000585630	KRTAP21-2	Q3LI59	83 aa		3.28	□□□□□ -1.88
CIRBP-204	ENST00000585630	PHGR1	C9JFL3	82 aa		3.13	□□□□□ -1.91
CIRBP-204	ENST00000585630	PRM1	P04553	51 aa		3.08	□□□□□ -1.92
CIRBP-204	ENST00000585630	KRTAP4-4	Q9BYR3	166 aa		2.97	□□□□□ -1.93
CIRBP-204	ENST00000585630	MUC19	Q7Z5P9	8384 aa		2.82	□□□□□ -1.96
CIRBP-204	ENST00000585630	KRTAP21-1	Q3LI58	79 aa		2.39	□□□□□ -2.03
CIRBP-204	ENST00000585630	MUC16	Q8WXI7	14507 aa		2.04	□□□□□ -2.08

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