RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 LCE1AQ5T7P2 110 aa3.4□□□□□ -1.87
ATG4D-202ENST00000585437 KRTAP2-3P0C7H8 128 aa3.34□□□□□ -1.87
ATG4D-202ENST00000585437 KRTAP2-4Q9BYR9 128 aa3.34□□□□□ -1.87
ATG4D-202ENST00000585437 SPRR2DP22532 72 aa3.29□□□□□ -1.88
ATG4D-202ENST00000585437 KRTAP19-7Q3SYF9 63 aa3.26□□□□□ -1.89
ATG4D-202ENST00000585437 KRTAP2-2Q9BYT5 123 aa3.24□□□□□ -1.89
ATG4D-202ENST00000585437 KRTAP2-1Q9BYU5 128 aa3.24□□□□□ -1.89
ATG4D-202ENST00000585437 KRTAP15-1Q3LI76 137 aa3.23□□□□□ -1.89
ATG4D-202ENST00000585437 MT1EP04732 61 aa3.22□□□□□ -1.89
ATG4D-202ENST00000585437 LCE3AQ5TA76 89 aa3.21□□□□□ -1.9
ATG4D-202ENST00000585437 LCE3BQ5TA77 95 aa3.2□□□□□ -1.9
ATG4D-202ENST00000585437 LCE5AQ5TCM9 118 aa3.2□□□□□ -1.9
ATG4D-202ENST00000585437 KRTAP19-3Q7Z4W3 81 aa3.18□□□□□ -1.9
ATG4D-202ENST00000585437 DSTQ03001 7570 aaKnown RBP3.15□□□□□ -1.9
ATG4D-202ENST00000585437 KRTAP19-5Q3LI72 72 aa3.15□□□□□ -1.91
ATG4D-202ENST00000585437 MT1GP13640 62 aa3.11□□□□□ -1.91
ATG4D-202ENST00000585437 KRTAP12-3P60328 96 aa3.11□□□□□ -1.91
ATG4D-202ENST00000585437 LUZP6Q538Z0 58 aa3.11□□□□□ -1.91
ATG4D-202ENST00000585437 MT1LQ93083 61 aa3.09□□□□□ -1.91
ATG4D-202ENST00000585437 SPRR5A0A1B0GTR4 108 aa3.07□□□□□ -1.92
ATG4D-202ENST00000585437 MT1MQ8N339 61 aa3.07□□□□□ -1.92
ATG4D-202ENST00000585437 NDUFAF8A1L188 74 aa3.06□□□□□ -1.92
ATG4D-202ENST00000585437 KRTAP19-4Q3LI73 84 aa3□□□□□ -1.93
ATG4D-202ENST00000585437 KRTAP4-9Q9BYQ8 210 aa2.97□□□□□ -1.93
ATG4D-202ENST00000585437 KRTAP4-3Q9BYR4 195 aa2.96□□□□□ -1.94
ATG4D-202ENST00000585437 LCE4AQ5TA78 99 aa2.94□□□□□ -1.94
ATG4D-202ENST00000585437 H3BS24 57 aa2.93□□□□□ -1.94
ATG4D-202ENST00000585437 KRTAP5-4Q6L8H1 288 aa2.93□□□□□ -1.94
ATG4D-202ENST00000585437 LCE1DQ5T752 114 aa2.92□□□□□ -1.94
ATG4D-202ENST00000585437 HMCN1Q96RW7 5635 aa2.91□□□□□ -1.94
ATG4D-202ENST00000585437 KRTAP4-7Q9BYR0 210 aa2.91□□□□□ -1.94
ATG4D-202ENST00000585437 LCE3CQ5T5A8 94 aa2.9□□□□□ -1.95
ATG4D-202ENST00000585437 GPR98Q8WXG9 6306 aa2.9□□□□□ -1.95
ATG4D-202ENST00000585437 MT4P47944 62 aa2.86□□□□□ -1.95
ATG4D-202ENST00000585437 KRTAP5-5Q701N2 237 aaPredicted RBP2.84□□□□□ -1.95
ATG4D-202ENST00000585437 KRTAP4-6Q9BYQ5 205 aa2.82□□□□□ -1.96
ATG4D-202ENST00000585437 A0A0A0MQY5 61 aa2.81□□□□□ -1.96
ATG4D-202ENST00000585437 AHNAK2Q8IVF2 5795 aa2.78□□□□□ -1.96
ATG4D-202ENST00000585437 LOC100996750A0A140TA64 210 aa2.76□□□□□ -1.97
ATG4D-202ENST00000585437 SYNE1Q8NF91 8797 aaKnown RBP2.74□□□□□ -1.97
ATG4D-202ENST00000585437 KRTAP20-2Q3LI61 65 aa2.74□□□□□ -1.97
ATG4D-202ENST00000585437 KRTAP5-10Q6L8G5 202 aa2.74□□□□□ -1.97
ATG4D-202ENST00000585437 KRTAP9-6A8MVA2 160 aa2.69□□□□□ -1.98
ATG4D-202ENST00000585437 KRTAP12-4P60329 112 aa2.68□□□□□ -1.98
ATG4D-202ENST00000585437 KRTAP5-3Q6L8H2 238 aa2.67□□□□□ -1.98
ATG4D-202ENST00000585437 MT1AP04731 61 aa2.63□□□□□ -1.99
ATG4D-202ENST00000585437 KRTAP5-7Q6L8G8 165 aa2.61□□□□□ -1.99
ATG4D-202ENST00000585437 INE1O15225 51 aa2.6□□□□□ -1.99
ATG4D-202ENST00000585437 KRTAP6-1Q3LI64 71 aa2.6□□□□□ -1.99
ATG4D-202ENST00000585437 KRTAP5-2Q701N4 177 aa2.58□□□□□ -2
ATG4D-202ENST00000585437 KRTAP9-4Q9BYQ2 154 aa2.52□□□□□ -2.01
ATG4D-202ENST00000585437 KRTAP6-2Q3LI66 62 aa2.47□□□□□ -2.01
ATG4D-202ENST00000585437 KRTAP4-11Q9BYQ6 195 aa2.47□□□□□ -2.01
ATG4D-202ENST00000585437 OBSCNQ5VST9 7968 aa2.43□□□□□ -2.02
ATG4D-202ENST00000585437 KRTAP5-8O75690 187 aa2.41□□□□□ -2.02
ATG4D-202ENST00000585437 KRTAP4-12Q9BQ66 201 aa2.4□□□□□ -2.03
ATG4D-202ENST00000585437 MT3P25713 68 aa2.38□□□□□ -2.03
ATG4D-202ENST00000585437 KRTAP9-9Q9BYP9 154 aa2.32□□□□□ -2.04
ATG4D-202ENST00000585437 MUC5BQ9HC84 5762 aaPredicted RBP2.31□□□□□ -2.04
ATG4D-202ENST00000585437 KRTAP5-1Q6L8H4 278 aa2.29□□□□□ -2.04
ATG4D-202ENST00000585437 MUC5ACP98088 5654 aa2.29□□□□□ -2.04
ATG4D-202ENST00000585437 AHNAKQ09666 5890 aaKnown RBP2.26□□□□□ -2.05
ATG4D-202ENST00000585437 LCE3DQ9BYE3 92 aa2.22□□□□□ -2.05
ATG4D-202ENST00000585437 LCE1EQ5T753 118 aa2.2□□□□□ -2.06
ATG4D-202ENST00000585437 LCE3EQ5T5B0 92 aa2.18□□□□□ -2.06
ATG4D-202ENST00000585437 KRTAP4-2Q9BYR5 136 aa2.09□□□□□ -2.07
ATG4D-202ENST00000585437 LCE1CQ5T751 118 aa2.05□□□□□ -2.08
ATG4D-202ENST00000585437 LCE1BQ5T7P3 118 aa2.05□□□□□ -2.08
ATG4D-202ENST00000585437 PRM1P04553 51 aa1.94□□□□□ -2.1
ATG4D-202ENST00000585437 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.9□□□□□ -2.11
ATG4D-202ENST00000585437 KRTAP5-11Q6L8G4 156 aa1.87□□□□□ -2.11
ATG4D-202ENST00000585437 LCE1FQ5T754 118 aa1.8□□□□□ -2.12
ATG4D-202ENST00000585437 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
ATG4D-202ENST00000585437 PHGR1C9JFL3 82 aa1.6□□□□□ -2.15
ATG4D-202ENST00000585437 KRTAP4-4Q9BYR3 166 aa1.52□□□□□ -2.17
ATG4D-202ENST00000585437 MUC19Q7Z5P9 8384 aa1.51□□□□□ -2.17
ATG4D-202ENST00000585437 KRTAP21-1Q3LI58 79 aa1.21□□□□□ -2.22
ATG4D-202ENST00000585437 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 273.3 ms