RNA–Protein interactions for RNA: ENST00000585375.1

GHDC-204, Transcript of GH3 domain containing, humanhuman

TSL 2

Gene GHDC, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-204ENST00000585375 CDC42SE1Q9NRR8 79 aa5.88□□□□□ -1.47
GHDC-204ENST00000585375 MT1GP13640 62 aa5.83□□□□□ -1.48
GHDC-204ENST00000585375 KRTAP19-5Q3LI72 72 aa5.83□□□□□ -1.48
GHDC-204ENST00000585375 DSTQ03001 7570 aaKnown RBP5.82□□□□□ -1.48
GHDC-204ENST00000585375 KRTAP25-1Q3LHN0 102 aa5.8□□□□□ -1.48
GHDC-204ENST00000585375 LCE3AQ5TA76 89 aa5.8□□□□□ -1.48
GHDC-204ENST00000585375 PP632Q6XCG6 107 aa5.8□□□□□ -1.48
GHDC-204ENST00000585375 KRTAP4-9Q9BYQ8 210 aa5.74□□□□□ -1.49
GHDC-204ENST00000585375 MT1MQ8N339 61 aa5.7□□□□□ -1.5
GHDC-204ENST00000585375 MT1LQ93083 61 aa5.7□□□□□ -1.5
GHDC-204ENST00000585375 ROMO1P60602 79 aa5.69□□□□□ -1.5
GHDC-204ENST00000585375 LCE4AQ5TA78 99 aa5.65□□□□□ -1.5
GHDC-204ENST00000585375 LCE1DQ5T752 114 aa5.64□□□□□ -1.51
GHDC-204ENST00000585375 BRK1Q8WUW1 75 aa5.62□□□□□ -1.51
GHDC-204ENST00000585375 GPR98Q8WXG9 6306 aa5.59□□□□□ -1.51
GHDC-204ENST00000585375 KRTAP23-1A1A580 65 aa5.59□□□□□ -1.51
GHDC-204ENST00000585375 KRTAP12-3P60328 96 aa5.59□□□□□ -1.51
GHDC-204ENST00000585375 MT4P47944 62 aa5.53□□□□□ -1.52
GHDC-204ENST00000585375 KRTAP5-4Q6L8H1 288 aa5.52□□□□□ -1.53
GHDC-204ENST00000585375 KRTAP4-3Q9BYR4 195 aa5.51□□□□□ -1.53
GHDC-204ENST00000585375 HMCN1Q96RW7 5635 aa5.51□□□□□ -1.53
GHDC-204ENST00000585375 KRTAP4-6Q9BYQ5 205 aa5.37□□□□□ -1.55
GHDC-204ENST00000585375 KRTAP4-7Q9BYR0 210 aa5.36□□□□□ -1.55
GHDC-204ENST00000585375 KRTAP15-1Q3LI76 137 aa5.34□□□□□ -1.55
GHDC-204ENST00000585375 PMAIP1Q13794 54 aa5.31□□□□□ -1.56
GHDC-204ENST00000585375 KRTAP19-4Q3LI73 84 aa5.31□□□□□ -1.56
GHDC-204ENST00000585375 AHNAK2Q8IVF2 5795 aa5.3□□□□□ -1.56
GHDC-204ENST00000585375 KRTAP5-10Q6L8G5 202 aa5.3□□□□□ -1.56
GHDC-204ENST00000585375 KRTAP5-5Q701N2 237 aaPredicted RBP5.26□□□□□ -1.57
GHDC-204ENST00000585375 SPRR5A0A1B0GTR4 108 aa5.2□□□□□ -1.58
GHDC-204ENST00000585375 KRTAP20-2Q3LI61 65 aa5.2□□□□□ -1.58
GHDC-204ENST00000585375 PRO0628Q9UI54 55 aa5.19□□□□□ -1.58
GHDC-204ENST00000585375 LCE3CQ5T5A8 94 aa5.18□□□□□ -1.58
GHDC-204ENST00000585375 KRTAP5-3Q6L8H2 238 aa5.16□□□□□ -1.58
GHDC-204ENST00000585375 KRTAP12-4P60329 112 aa5.15□□□□□ -1.59
GHDC-204ENST00000585375 KRTAP5-7Q6L8G8 165 aa5.12□□□□□ -1.59
GHDC-204ENST00000585375 LOC100996750A0A140TA64 210 aa5.08□□□□□ -1.6
GHDC-204ENST00000585375 PRAC1Q96KF2 57 aa4.99□□□□□ -1.61
GHDC-204ENST00000585375 SYNE1Q8NF91 8797 aaKnown RBP4.97□□□□□ -1.61
GHDC-204ENST00000585375 KTN1-AS1Q86SY8 53 aa4.88□□□□□ -1.63
GHDC-204ENST00000585375 MT1AP04731 61 aa4.86□□□□□ -1.63
GHDC-204ENST00000585375 KRTAP9-6A8MVA2 160 aa4.84□□□□□ -1.63
GHDC-204ENST00000585375 KRTAP5-2Q701N4 177 aa4.82□□□□□ -1.64
GHDC-204ENST00000585375 KRTAP6-1Q3LI64 71 aa4.81□□□□□ -1.64
GHDC-204ENST00000585375 KRTAP4-11Q9BYQ6 195 aa4.77□□□□□ -1.65
GHDC-204ENST00000585375 KRTAP9-4Q9BYQ2 154 aa4.7□□□□□ -1.66
GHDC-204ENST00000585375 SVIPQ8NHG7 77 aa4.67□□□□□ -1.66
GHDC-204ENST00000585375 KRTAP5-8O75690 187 aa4.61□□□□□ -1.67
GHDC-204ENST00000585375 KRTAP6-2Q3LI66 62 aa4.61□□□□□ -1.67
GHDC-204ENST00000585375 MT3P25713 68 aa4.46□□□□□ -1.7
GHDC-204ENST00000585375 OBSCNQ5VST9 7968 aa4.43□□□□□ -1.7
GHDC-204ENST00000585375 MUC5ACP98088 5654 aa4.42□□□□□ -1.7
GHDC-204ENST00000585375 KRTAP9-9Q9BYP9 154 aa4.4□□□□□ -1.71
GHDC-204ENST00000585375 MUC5BQ9HC84 5762 aaPredicted RBP4.39□□□□□ -1.71
GHDC-204ENST00000585375 AHNAKQ09666 5890 aaKnown RBP4.36□□□□□ -1.71
GHDC-204ENST00000585375 KRTAP5-1Q6L8H4 278 aa4.33□□□□□ -1.72
GHDC-204ENST00000585375 LUZP6Q538Z0 58 aa4.23□□□□□ -1.73
GHDC-204ENST00000585375 LCE1EQ5T753 118 aa4.15□□□□□ -1.75
GHDC-204ENST00000585375 KRTAP4-2Q9BYR5 136 aa3.89□□□□□ -1.79
GHDC-204ENST00000585375 LCE1CQ5T751 118 aa3.84□□□□□ -1.79
GHDC-204ENST00000585375 LCE1BQ5T7P3 118 aa3.84□□□□□ -1.79
GHDC-204ENST00000585375 LCE3DQ9BYE3 92 aa3.81□□□□□ -1.8
GHDC-204ENST00000585375 NDUFAF8A1L188 74 aa3.69□□□□□ -1.82
GHDC-204ENST00000585375 LCE3EQ5T5B0 92 aa3.64□□□□□ -1.83
GHDC-204ENST00000585375 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.5□□□□□ -1.85
GHDC-204ENST00000585375 KRTAP4-12Q9BQ66 201 aa3.5□□□□□ -1.85
GHDC-204ENST00000585375 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
GHDC-204ENST00000585375 LCE1FQ5T754 118 aa3.44□□□□□ -1.86
GHDC-204ENST00000585375 KRTAP21-2Q3LI59 83 aa3.18□□□□□ -1.9
GHDC-204ENST00000585375 A0A0A0MQY5 61 aa3.12□□□□□ -1.91
GHDC-204ENST00000585375 PHGR1C9JFL3 82 aa3.08□□□□□ -1.92
GHDC-204ENST00000585375 INE1O15225 51 aa3.04□□□□□ -1.92
GHDC-204ENST00000585375 PRM1P04553 51 aa2.91□□□□□ -1.94
GHDC-204ENST00000585375 KRTAP4-4Q9BYR3 166 aa2.87□□□□□ -1.95
GHDC-204ENST00000585375 H3BS24 57 aa2.82□□□□□ -1.96
GHDC-204ENST00000585375 MUC19Q7Z5P9 8384 aa2.71□□□□□ -1.98
GHDC-204ENST00000585375 KRTAP21-1Q3LI58 79 aa2.37□□□□□ -2.03
GHDC-204ENST00000585375 MUC16Q8WXI7 14507 aa2□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 55.4 ms