RNA–Protein interactions for RNA: ENST00000584951.1

DDX42-219, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-219ENST00000584951 LCE1DQ5T752 114 aa4.82□□□□□ -1.64
DDX42-219ENST00000584951 LINC01554Q52M75 96 aa4.8□□□□□ -1.64
DDX42-219ENST00000584951 PRAC1Q96KF2 57 aa4.79□□□□□ -1.64
DDX42-219ENST00000584951 K7ERS5 55 aa4.77□□□□□ -1.65
DDX42-219ENST00000584951 KRTAP13-4Q3LI77 160 aa4.74□□□□□ -1.65
DDX42-219ENST00000584951 KRTAP19-3Q7Z4W3 81 aa4.74□□□□□ -1.65
DDX42-219ENST00000584951 LCE4AQ5TA78 99 aa4.72□□□□□ -1.65
DDX42-219ENST00000584951 KRTAP5-10Q6L8G5 202 aa4.72□□□□□ -1.65
DDX42-219ENST00000584951 KRTAP19-7Q3SYF9 63 aa4.71□□□□□ -1.66
DDX42-219ENST00000584951 HMCN1Q96RW7 5635 aa4.7□□□□□ -1.66
DDX42-219ENST00000584951 MT1EP04732 61 aa4.69□□□□□ -1.66
DDX42-219ENST00000584951 KRTAP19-4Q3LI73 84 aa4.69□□□□□ -1.66
DDX42-219ENST00000584951 MT4P47944 62 aa4.67□□□□□ -1.66
DDX42-219ENST00000584951 AHNAK2Q8IVF2 5795 aa4.67□□□□□ -1.66
DDX42-219ENST00000584951 ROMO1P60602 79 aa4.66□□□□□ -1.66
DDX42-219ENST00000584951 KRTAP25-1Q3LHN0 102 aa4.65□□□□□ -1.67
DDX42-219ENST00000584951 A0A0D9SG42 100 aa4.62□□□□□ -1.67
DDX42-219ENST00000584951 KRTAP12-1P59990 96 aa4.6□□□□□ -1.67
DDX42-219ENST00000584951 KRTAP5-7Q6L8G8 165 aa4.6□□□□□ -1.67
DDX42-219ENST00000584951 MT1GP13640 62 aa4.59□□□□□ -1.67
DDX42-219ENST00000584951 KRTAP5-4Q6L8H1 288 aa4.57□□□□□ -1.68
DDX42-219ENST00000584951 PP632Q6XCG6 107 aa4.55□□□□□ -1.68
DDX42-219ENST00000584951 KRTAP4-6Q9BYQ5 205 aa4.52□□□□□ -1.69
DDX42-219ENST00000584951 SPINT4Q6UDR6 99 aa4.5□□□□□ -1.69
DDX42-219ENST00000584951 KRTAP5-3Q6L8H2 238 aa4.49□□□□□ -1.69
DDX42-219ENST00000584951 MT1MQ8N339 61 aa4.49□□□□□ -1.69
DDX42-219ENST00000584951 KRTAP19-5Q3LI72 72 aa4.46□□□□□ -1.7
DDX42-219ENST00000584951 CAMK2N1Q7Z7J9 78 aa4.46□□□□□ -1.7
DDX42-219ENST00000584951 MT1LQ93083 61 aa4.41□□□□□ -1.7
DDX42-219ENST00000584951 KRTAP15-1Q3LI76 137 aa4.4□□□□□ -1.71
DDX42-219ENST00000584951 KRTAP4-3Q9BYR4 195 aa4.37□□□□□ -1.71
DDX42-219ENST00000584951 C10orf95Q9H7T3 257 aa4.37□□□□□ -1.71
DDX42-219ENST00000584951 SPRR5A0A1B0GTR4 108 aa4.34□□□□□ -1.71
DDX42-219ENST00000584951 KRTAP20-2Q3LI61 65 aa4.32□□□□□ -1.72
DDX42-219ENST00000584951 KRTAP5-5Q701N2 237 aaPredicted RBP4.19□□□□□ -1.74
DDX42-219ENST00000584951 KRTAP12-4P60329 112 aa4.16□□□□□ -1.74
DDX42-219ENST00000584951 LCE3AQ5TA76 89 aa4.14□□□□□ -1.75
DDX42-219ENST00000584951 KRTAP4-7Q9BYR0 210 aa4.14□□□□□ -1.75
DDX42-219ENST00000584951 KRTAP9-4Q9BYQ2 154 aa4.13□□□□□ -1.75
DDX42-219ENST00000584951 TNP1P09430 55 aa4.12□□□□□ -1.75
DDX42-219ENST00000584951 KRTAP4-11Q9BYQ6 195 aa4.05□□□□□ -1.76
DDX42-219ENST00000584951 KRTAP9-9Q9BYP9 154 aa4.04□□□□□ -1.76
DDX42-219ENST00000584951 LOC100996750A0A140TA64 210 aa4.02□□□□□ -1.77
DDX42-219ENST00000584951 SYNE1Q8NF91 8797 aaKnown RBP4□□□□□ -1.77
DDX42-219ENST00000584951 KRTAP12-3P60328 96 aa3.99□□□□□ -1.77
DDX42-219ENST00000584951 NDUFAF8A1L188 74 aa3.98□□□□□ -1.77
DDX42-219ENST00000584951 KRTAP4-12Q9BQ66 201 aa3.96□□□□□ -1.78
DDX42-219ENST00000584951 AHNAKQ09666 5890 aaKnown RBP3.95□□□□□ -1.78
DDX42-219ENST00000584951 MUC5ACP98088 5654 aa3.93□□□□□ -1.78
DDX42-219ENST00000584951 KRTAP5-8O75690 187 aa3.93□□□□□ -1.78
DDX42-219ENST00000584951 KRTAP5-2Q701N4 177 aa3.93□□□□□ -1.78
DDX42-219ENST00000584951 MUC5BQ9HC84 5762 aaPredicted RBP3.88□□□□□ -1.79
DDX42-219ENST00000584951 LUZP6Q538Z0 58 aa3.83□□□□□ -1.8
DDX42-219ENST00000584951 MT1AP04731 61 aa3.75□□□□□ -1.81
DDX42-219ENST00000584951 KRTAP6-1Q3LI64 71 aa3.74□□□□□ -1.81
DDX42-219ENST00000584951 KRTAP6-2Q3LI66 62 aa3.65□□□□□ -1.83
DDX42-219ENST00000584951 LCE3CQ5T5A8 94 aa3.63□□□□□ -1.83
DDX42-219ENST00000584951 OBSCNQ5VST9 7968 aa3.62□□□□□ -1.83
DDX42-219ENST00000584951 KRTAP5-1Q6L8H4 278 aa3.6□□□□□ -1.83
DDX42-219ENST00000584951 MT3P25713 68 aa3.52□□□□□ -1.85
DDX42-219ENST00000584951 KRTAP9-6A8MVA2 160 aa3.44□□□□□ -1.86
DDX42-219ENST00000584951 INE1O15225 51 aa3.35□□□□□ -1.87
DDX42-219ENST00000584951 LCE1EQ5T753 118 aa3.3□□□□□ -1.88
DDX42-219ENST00000584951 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
DDX42-219ENST00000584951 KRTAP4-2Q9BYR5 136 aa3.15□□□□□ -1.91
DDX42-219ENST00000584951 LCE1BQ5T7P3 118 aa3.08□□□□□ -1.92
DDX42-219ENST00000584951 LCE1CQ5T751 118 aa3.06□□□□□ -1.92
DDX42-219ENST00000584951 KRTAP5-11Q6L8G4 156 aa2.88□□□□□ -1.95
DDX42-219ENST00000584951 LCE3EQ5T5B0 92 aa2.78□□□□□ -1.96
DDX42-219ENST00000584951 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.75□□□□□ -1.97
DDX42-219ENST00000584951 PHGR1C9JFL3 82 aa2.74□□□□□ -1.97
DDX42-219ENST00000584951 LCE3DQ9BYE3 92 aa2.68□□□□□ -1.98
DDX42-219ENST00000584951 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
DDX42-219ENST00000584951 PRM1P04553 51 aa2.43□□□□□ -2.02
DDX42-219ENST00000584951 KRTAP4-4Q9BYR3 166 aa2.29□□□□□ -2.04
DDX42-219ENST00000584951 MUC19Q7Z5P9 8384 aa2.25□□□□□ -2.05
DDX42-219ENST00000584951 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
DDX42-219ENST00000584951 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 56.6 ms