RNA–Protein interactions for RNA: ENST00000584669.5

TOP3A-218, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-218ENST00000584669 V9GYY9 64 aa7.42□□□□□ -1.22
TOP3A-218ENST00000584669 Q1T7F1 81 aa7.41□□□□□ -1.22
TOP3A-218ENST00000584669 MT1LQ93083 61 aa7.39□□□□□ -1.23
TOP3A-218ENST00000584669 PP632Q6XCG6 107 aa7.36□□□□□ -1.23
TOP3A-218ENST00000584669 MT1MQ8N339 61 aa7.34□□□□□ -1.23
TOP3A-218ENST00000584669 LCE1DQ5T752 114 aa7.31□□□□□ -1.24
TOP3A-218ENST00000584669 K7ERS5 55 aa7.27□□□□□ -1.25
TOP3A-218ENST00000584669 MT4P47944 62 aa7.24□□□□□ -1.25
TOP3A-218ENST00000584669 KRTAP12-3P60328 96 aa7.23□□□□□ -1.25
TOP3A-218ENST00000584669 KRTAP25-1Q3LHN0 102 aa7.21□□□□□ -1.26
TOP3A-218ENST00000584669 LCE4AQ5TA78 99 aa7.21□□□□□ -1.26
TOP3A-218ENST00000584669 KRTAP4-3Q9BYR4 195 aa7.2□□□□□ -1.26
TOP3A-218ENST00000584669 A6NED7 52 aa7.17□□□□□ -1.26
TOP3A-218ENST00000584669 PCP4P48539 62 aa7.16□□□□□ -1.26
TOP3A-218ENST00000584669 HMCN1Q96RW7 5635 aa7.11□□□□□ -1.27
TOP3A-218ENST00000584669 RPS28P62857 69 aaKnown RBP7.1□□□□□ -1.27
TOP3A-218ENST00000584669 KRTAP4-7Q9BYR0 210 aa7.08□□□□□ -1.28
TOP3A-218ENST00000584669 KRTAP5-4Q6L8H1 288 aa7.01□□□□□ -1.29
TOP3A-218ENST00000584669 AHNAK2Q8IVF2 5795 aa6.97□□□□□ -1.29
TOP3A-218ENST00000584669 KRTAP4-6Q9BYQ5 205 aa6.97□□□□□ -1.29
TOP3A-218ENST00000584669 KRTAP23-1A1A580 65 aa6.92□□□□□ -1.3
TOP3A-218ENST00000584669 CDC42SE1Q9NRR8 79 aa6.92□□□□□ -1.3
TOP3A-218ENST00000584669 KRTAP5-10Q6L8G5 202 aa6.86□□□□□ -1.31
TOP3A-218ENST00000584669 ROMO1P60602 79 aa6.83□□□□□ -1.32
TOP3A-218ENST00000584669 KRTAP15-1Q3LI76 137 aa6.8□□□□□ -1.32
TOP3A-218ENST00000584669 KRTAP19-4Q3LI73 84 aa6.74□□□□□ -1.33
TOP3A-218ENST00000584669 LOC100996750A0A140TA64 210 aa6.71□□□□□ -1.34
TOP3A-218ENST00000584669 KRTAP5-5Q701N2 237 aaPredicted RBP6.7□□□□□ -1.34
TOP3A-218ENST00000584669 KRTAP20-2Q3LI61 65 aa6.68□□□□□ -1.34
TOP3A-218ENST00000584669 LCE3CQ5T5A8 94 aa6.67□□□□□ -1.34
TOP3A-218ENST00000584669 KRTAP5-3Q6L8H2 238 aa6.67□□□□□ -1.34
TOP3A-218ENST00000584669 KRTAP5-7Q6L8G8 165 aa6.62□□□□□ -1.35
TOP3A-218ENST00000584669 SPRR5A0A1B0GTR4 108 aa6.59□□□□□ -1.35
TOP3A-218ENST00000584669 KRTAP12-4P60329 112 aa6.59□□□□□ -1.35
TOP3A-218ENST00000584669 SYNE1Q8NF91 8797 aaKnown RBP6.4□□□□□ -1.38
TOP3A-218ENST00000584669 KRTAP9-6A8MVA2 160 aa6.33□□□□□ -1.4
TOP3A-218ENST00000584669 MT1AP04731 61 aa6.29□□□□□ -1.4
TOP3A-218ENST00000584669 BRK1Q8WUW1 75 aa6.29□□□□□ -1.4
TOP3A-218ENST00000584669 KRTAP6-1Q3LI64 71 aa6.27□□□□□ -1.41
TOP3A-218ENST00000584669 KRTAP4-11Q9BYQ6 195 aa6.15□□□□□ -1.42
TOP3A-218ENST00000584669 KRTAP5-2Q701N4 177 aa6.11□□□□□ -1.43
TOP3A-218ENST00000584669 KRTAP9-4Q9BYQ2 154 aa6.06□□□□□ -1.44
TOP3A-218ENST00000584669 KRTAP6-2Q3LI66 62 aa5.95□□□□□ -1.46
TOP3A-218ENST00000584669 KRTAP5-8O75690 187 aa5.92□□□□□ -1.46
TOP3A-218ENST00000584669 PMAIP1Q13794 54 aa5.89□□□□□ -1.47
TOP3A-218ENST00000584669 AHNAKQ09666 5890 aaKnown RBP5.79□□□□□ -1.48
TOP3A-218ENST00000584669 MUC5ACP98088 5654 aa5.76□□□□□ -1.49
TOP3A-218ENST00000584669 MUC5BQ9HC84 5762 aaPredicted RBP5.72□□□□□ -1.49
TOP3A-218ENST00000584669 MT3P25713 68 aa5.72□□□□□ -1.49
TOP3A-218ENST00000584669 PRAC1Q96KF2 57 aa5.71□□□□□ -1.5
TOP3A-218ENST00000584669 KRTAP9-9Q9BYP9 154 aa5.7□□□□□ -1.5
TOP3A-218ENST00000584669 OBSCNQ5VST9 7968 aa5.68□□□□□ -1.5
TOP3A-218ENST00000584669 H3BS24 57 aa5.58□□□□□ -1.52
TOP3A-218ENST00000584669 KRTAP5-1Q6L8H4 278 aa5.52□□□□□ -1.53
TOP3A-218ENST00000584669 PRO0628Q9UI54 55 aa5.51□□□□□ -1.53
TOP3A-218ENST00000584669 KTN1-AS1Q86SY8 53 aa5.27□□□□□ -1.57
TOP3A-218ENST00000584669 LCE1EQ5T753 118 aa5.2□□□□□ -1.58
TOP3A-218ENST00000584669 KRTAP4-12Q9BQ66 201 aa5.12□□□□□ -1.59
TOP3A-218ENST00000584669 SVIPQ8NHG7 77 aa5.07□□□□□ -1.6
TOP3A-218ENST00000584669 LCE1BQ5T7P3 118 aa5.02□□□□□ -1.61
TOP3A-218ENST00000584669 KRTAP4-2Q9BYR5 136 aa4.96□□□□□ -1.62
TOP3A-218ENST00000584669 LCE1CQ5T751 118 aa4.84□□□□□ -1.63
TOP3A-218ENST00000584669 LCE3DQ9BYE3 92 aa4.82□□□□□ -1.64
TOP3A-218ENST00000584669 LUZP6Q538Z0 58 aa4.73□□□□□ -1.65
TOP3A-218ENST00000584669 LCE3EQ5T5B0 92 aa4.56□□□□□ -1.68
TOP3A-218ENST00000584669 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.42□□□□□ -1.7
TOP3A-218ENST00000584669 KRTAP5-11Q6L8G4 156 aa4.4□□□□□ -1.71
TOP3A-218ENST00000584669 LCE1FQ5T754 118 aa4.3□□□□□ -1.72
TOP3A-218ENST00000584669 KRTAP21-2Q3LI59 83 aa4.12□□□□□ -1.75
TOP3A-218ENST00000584669 PHGR1C9JFL3 82 aa4.05□□□□□ -1.76
TOP3A-218ENST00000584669 NDUFAF8A1L188 74 aa3.91□□□□□ -1.78
TOP3A-218ENST00000584669 KRTAP4-4Q9BYR3 166 aa3.8□□□□□ -1.8
TOP3A-218ENST00000584669 A0A0A0MQY5 61 aa3.66□□□□□ -1.82
TOP3A-218ENST00000584669 MUC19Q7Z5P9 8384 aa3.53□□□□□ -1.84
TOP3A-218ENST00000584669 PRM1P04553 51 aa3.53□□□□□ -1.84
TOP3A-218ENST00000584669 INE1O15225 51 aa3.09□□□□□ -1.91
TOP3A-218ENST00000584669 KRTAP21-1Q3LI58 79 aa3.06□□□□□ -1.92
TOP3A-218ENST00000584669 MUC16Q8WXI7 14507 aa2.54□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 82.3 ms