RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 KRTAP12-1P59990 96 aa5.16□□□□□ -1.58
CDK5RAP3-234ENST00000584525 UQCR11O14957 56 aa5.14□□□□□ -1.59
CDK5RAP3-234ENST00000584525 KRTAP4-11Q9BYQ6 195 aa5.13□□□□□ -1.59
CDK5RAP3-234ENST00000584525 V9GYY9 64 aa5.13□□□□□ -1.59
CDK5RAP3-234ENST00000584525 KRTAP4-2Q9BYR5 136 aa5.12□□□□□ -1.59
CDK5RAP3-234ENST00000584525 KRTAP23-1A1A580 65 aa5.09□□□□□ -1.59
CDK5RAP3-234ENST00000584525 MIR22HGQ0VDD5 57 aa5.04□□□□□ -1.6
CDK5RAP3-234ENST00000584525 K7ERS5 55 aa5.03□□□□□ -1.6
CDK5RAP3-234ENST00000584525 PSPHP1O15172 72 aa5.02□□□□□ -1.61
CDK5RAP3-234ENST00000584525 Q1T7F1 81 aa5.02□□□□□ -1.61
CDK5RAP3-234ENST00000584525 TNP1P09430 55 aa4.98□□□□□ -1.61
CDK5RAP3-234ENST00000584525 A6NED7 52 aa4.93□□□□□ -1.62
CDK5RAP3-234ENST00000584525 C10orf95Q9H7T3 257 aa4.9□□□□□ -1.63
CDK5RAP3-234ENST00000584525 KRTAP19-3Q7Z4W3 81 aa4.89□□□□□ -1.63
CDK5RAP3-234ENST00000584525 HMCN1Q96RW7 5635 aa4.88□□□□□ -1.63
CDK5RAP3-234ENST00000584525 KRTAP19-7Q3SYF9 63 aa4.88□□□□□ -1.63
CDK5RAP3-234ENST00000584525 MT1EP04732 61 aa4.87□□□□□ -1.63
CDK5RAP3-234ENST00000584525 MT4P47944 62 aa4.8□□□□□ -1.64
CDK5RAP3-234ENST00000584525 KRTAP19-5Q3LI72 72 aa4.8□□□□□ -1.64
CDK5RAP3-234ENST00000584525 LCE3AQ5TA76 89 aa4.8□□□□□ -1.64
CDK5RAP3-234ENST00000584525 AHNAK2Q8IVF2 5795 aa4.79□□□□□ -1.64
CDK5RAP3-234ENST00000584525 KRTAP15-1Q3LI76 137 aa4.78□□□□□ -1.64
CDK5RAP3-234ENST00000584525 KRTAP25-1Q3LHN0 102 aa4.76□□□□□ -1.65
CDK5RAP3-234ENST00000584525 MT1GP13640 62 aa4.74□□□□□ -1.65
CDK5RAP3-234ENST00000584525 PP632Q6XCG6 107 aa4.72□□□□□ -1.65
CDK5RAP3-234ENST00000584525 CDC42SE1Q9NRR8 79 aa4.71□□□□□ -1.66
CDK5RAP3-234ENST00000584525 KRTAP5-10Q6L8G5 202 aa4.68□□□□□ -1.66
CDK5RAP3-234ENST00000584525 MT1MQ8N339 61 aa4.65□□□□□ -1.67
CDK5RAP3-234ENST00000584525 KRTAP12-3P60328 96 aa4.63□□□□□ -1.67
CDK5RAP3-234ENST00000584525 MT1LQ93083 61 aa4.62□□□□□ -1.67
CDK5RAP3-234ENST00000584525 ROMO1P60602 79 aa4.6□□□□□ -1.67
CDK5RAP3-234ENST00000584525 KRTAP5-4Q6L8H1 288 aa4.6□□□□□ -1.67
CDK5RAP3-234ENST00000584525 KRTAP4-3Q9BYR4 195 aa4.57□□□□□ -1.68
CDK5RAP3-234ENST00000584525 KRTAP5-7Q6L8G8 165 aa4.54□□□□□ -1.68
CDK5RAP3-234ENST00000584525 BRK1Q8WUW1 75 aa4.53□□□□□ -1.68
CDK5RAP3-234ENST00000584525 KRTAP5-3Q6L8H2 238 aa4.5□□□□□ -1.69
CDK5RAP3-234ENST00000584525 SPRR5A0A1B0GTR4 108 aa4.4□□□□□ -1.71
CDK5RAP3-234ENST00000584525 KRTAP20-2Q3LI61 65 aa4.39□□□□□ -1.71
CDK5RAP3-234ENST00000584525 PRO0628Q9UI54 55 aa4.37□□□□□ -1.71
CDK5RAP3-234ENST00000584525 PMAIP1Q13794 54 aa4.32□□□□□ -1.72
CDK5RAP3-234ENST00000584525 KRTAP12-4P60329 112 aa4.29□□□□□ -1.72
CDK5RAP3-234ENST00000584525 KRTAP5-5Q701N2 237 aaPredicted RBP4.28□□□□□ -1.72
CDK5RAP3-234ENST00000584525 SYNE1Q8NF91 8797 aaKnown RBP4.26□□□□□ -1.73
CDK5RAP3-234ENST00000584525 LCE3CQ5T5A8 94 aa4.26□□□□□ -1.73
CDK5RAP3-234ENST00000584525 SVIPQ8NHG7 77 aa4.19□□□□□ -1.74
CDK5RAP3-234ENST00000584525 AHNAKQ09666 5890 aaKnown RBP4.08□□□□□ -1.76
CDK5RAP3-234ENST00000584525 KTN1-AS1Q86SY8 53 aa4.06□□□□□ -1.76
CDK5RAP3-234ENST00000584525 MUC5ACP98088 5654 aa4.02□□□□□ -1.77
CDK5RAP3-234ENST00000584525 MUC5BQ9HC84 5762 aaPredicted RBP4.02□□□□□ -1.77
CDK5RAP3-234ENST00000584525 PRAC1Q96KF2 57 aa4.01□□□□□ -1.77
CDK5RAP3-234ENST00000584525 KRTAP5-2Q701N4 177 aa3.97□□□□□ -1.77
CDK5RAP3-234ENST00000584525 A0A0A0MQY5 61 aa3.95□□□□□ -1.78
CDK5RAP3-234ENST00000584525 KRTAP5-8O75690 187 aa3.95□□□□□ -1.78
CDK5RAP3-234ENST00000584525 MT1AP04731 61 aa3.95□□□□□ -1.78
CDK5RAP3-234ENST00000584525 KRTAP9-6A8MVA2 160 aa3.91□□□□□ -1.78
CDK5RAP3-234ENST00000584525 KRTAP6-1Q3LI64 71 aa3.9□□□□□ -1.79
CDK5RAP3-234ENST00000584525 OBSCNQ5VST9 7968 aa3.88□□□□□ -1.79
CDK5RAP3-234ENST00000584525 KRTAP6-2Q3LI66 62 aa3.81□□□□□ -1.8
CDK5RAP3-234ENST00000584525 MT3P25713 68 aa3.68□□□□□ -1.82
CDK5RAP3-234ENST00000584525 KRTAP5-1Q6L8H4 278 aa3.63□□□□□ -1.83
CDK5RAP3-234ENST00000584525 LCE1EQ5T753 118 aa3.46□□□□□ -1.86
CDK5RAP3-234ENST00000584525 KRTAP5-11Q6L8G4 156 aa3.46□□□□□ -1.86
CDK5RAP3-234ENST00000584525 LUZP6Q538Z0 58 aa3.43□□□□□ -1.86
CDK5RAP3-234ENST00000584525 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.36□□□□□ -1.87
CDK5RAP3-234ENST00000584525 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
CDK5RAP3-234ENST00000584525 LCE1BQ5T7P3 118 aa3.24□□□□□ -1.89
CDK5RAP3-234ENST00000584525 NDUFAF8A1L188 74 aa3.22□□□□□ -1.89
CDK5RAP3-234ENST00000584525 LCE3DQ9BYE3 92 aa3.14□□□□□ -1.91
CDK5RAP3-234ENST00000584525 LCE1CQ5T751 118 aa3.12□□□□□ -1.91
CDK5RAP3-234ENST00000584525 LCE3EQ5T5B0 92 aa2.99□□□□□ -1.93
CDK5RAP3-234ENST00000584525 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
CDK5RAP3-234ENST00000584525 PHGR1C9JFL3 82 aa2.76□□□□□ -1.97
CDK5RAP3-234ENST00000584525 INE1O15225 51 aa2.62□□□□□ -1.99
CDK5RAP3-234ENST00000584525 KRTAP21-2Q3LI59 83 aa2.56□□□□□ -2
CDK5RAP3-234ENST00000584525 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
CDK5RAP3-234ENST00000584525 PRM1P04553 51 aa2.36□□□□□ -2.03
CDK5RAP3-234ENST00000584525 KRTAP21-1Q3LI58 79 aa2.1□□□□□ -2.07
CDK5RAP3-234ENST00000584525 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 10.6 ms