RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 MDN1Q9NU22 5596 aa4.26□□□□□ -1.73
CDRT1-207ENST00000583965 SPRR2EP22531 72 aa4.26□□□□□ -1.73
CDRT1-207ENST00000583965 SPRR2BP35325 72 aa4.26□□□□□ -1.73
CDRT1-207ENST00000583965 SPRR2AP35326 72 aa4.26□□□□□ -1.73
CDRT1-207ENST00000583965 KRTAP12-3P60328 96 aa4.26□□□□□ -1.73
CDRT1-207ENST00000583965 LCE1AQ5T7P2 110 aa4.25□□□□□ -1.73
CDRT1-207ENST00000583965 KRTAP19-3Q7Z4W3 81 aa4.2□□□□□ -1.74
CDRT1-207ENST00000583965 NEBP20929 6669 aa4.18□□□□□ -1.74
CDRT1-207ENST00000583965 MT1LQ93083 61 aa4.17□□□□□ -1.74
CDRT1-207ENST00000583965 MT1GP13640 62 aa4.15□□□□□ -1.75
CDRT1-207ENST00000583965 LCE5AQ5TCM9 118 aa4.15□□□□□ -1.75
CDRT1-207ENST00000583965 KRTAP15-1Q3LI76 137 aa4.13□□□□□ -1.75
CDRT1-207ENST00000583965 SPRR2DP22532 72 aa4.12□□□□□ -1.75
CDRT1-207ENST00000583965 KRTAP19-4Q3LI73 84 aa4.11□□□□□ -1.75
CDRT1-207ENST00000583965 KRTAP4-12Q9BQ66 201 aa4.1□□□□□ -1.75
CDRT1-207ENST00000583965 KRTAP20-1Q3LI63 56 aa4.07□□□□□ -1.76
CDRT1-207ENST00000583965 MT1MQ8N339 61 aa4.06□□□□□ -1.76
CDRT1-207ENST00000583965 KRTAP2-3P0C7H8 128 aa4.01□□□□□ -1.77
CDRT1-207ENST00000583965 KRTAP2-4Q9BYR9 128 aa4.01□□□□□ -1.77
CDRT1-207ENST00000583965 SPRR5A0A1B0GTR4 108 aa3.97□□□□□ -1.77
CDRT1-207ENST00000583965 LCE3BQ5TA77 95 aa3.97□□□□□ -1.77
CDRT1-207ENST00000583965 LCE3CQ5T5A8 94 aa3.96□□□□□ -1.78
CDRT1-207ENST00000583965 KRTAP4-7Q9BYR0 210 aa3.94□□□□□ -1.78
CDRT1-207ENST00000583965 DSTQ03001 7570 aaKnown RBP3.93□□□□□ -1.78
CDRT1-207ENST00000583965 KRTAP4-3Q9BYR4 195 aa3.92□□□□□ -1.78
CDRT1-207ENST00000583965 KRTAP2-2Q9BYT5 123 aa3.91□□□□□ -1.78
CDRT1-207ENST00000583965 KRTAP2-1Q9BYU5 128 aa3.91□□□□□ -1.78
CDRT1-207ENST00000583965 KRTAP9-9Q9BYP9 154 aa3.88□□□□□ -1.79
CDRT1-207ENST00000583965 KRTAP9-4Q9BYQ2 154 aa3.88□□□□□ -1.79
CDRT1-207ENST00000583965 LCE4AQ5TA78 99 aa3.87□□□□□ -1.79
CDRT1-207ENST00000583965 LUZP6Q538Z0 58 aa3.75□□□□□ -1.81
CDRT1-207ENST00000583965 LCE1DQ5T752 114 aa3.73□□□□□ -1.81
CDRT1-207ENST00000583965 KRTAP9-6A8MVA2 160 aa3.7□□□□□ -1.82
CDRT1-207ENST00000583965 KRTAP5-5Q701N2 237 aaPredicted RBP3.69□□□□□ -1.82
CDRT1-207ENST00000583965 KRTAP5-4Q6L8H1 288 aa3.67□□□□□ -1.82
CDRT1-207ENST00000583965 GPR98Q8WXG9 6306 aa3.63□□□□□ -1.83
CDRT1-207ENST00000583965 NDUFAF8A1L188 74 aa3.61□□□□□ -1.83
CDRT1-207ENST00000583965 KRTAP4-9Q9BYQ8 210 aa3.6□□□□□ -1.83
CDRT1-207ENST00000583965 MT1AP04731 61 aa3.56□□□□□ -1.84
CDRT1-207ENST00000583965 MT4P47944 62 aa3.55□□□□□ -1.84
CDRT1-207ENST00000583965 KRTAP12-4P60329 112 aa3.52□□□□□ -1.85
CDRT1-207ENST00000583965 KRTAP4-11Q9BYQ6 195 aa3.51□□□□□ -1.85
CDRT1-207ENST00000583965 KRTAP6-1Q3LI64 71 aa3.5□□□□□ -1.85
CDRT1-207ENST00000583965 HMCN1Q96RW7 5635 aa3.48□□□□□ -1.85
CDRT1-207ENST00000583965 SYNE1Q8NF91 8797 aaKnown RBP3.47□□□□□ -1.85
CDRT1-207ENST00000583965 KRTAP4-2Q9BYR5 136 aa3.47□□□□□ -1.85
CDRT1-207ENST00000583965 A0A0A0MQY5 61 aa3.43□□□□□ -1.86
CDRT1-207ENST00000583965 KRTAP20-2Q3LI61 65 aa3.43□□□□□ -1.86
CDRT1-207ENST00000583965 KRTAP5-3Q6L8H2 238 aa3.33□□□□□ -1.88
CDRT1-207ENST00000583965 KRTAP5-2Q701N4 177 aa3.28□□□□□ -1.88
CDRT1-207ENST00000583965 KRTAP6-2Q3LI66 62 aa3.27□□□□□ -1.89
CDRT1-207ENST00000583965 MT3P25713 68 aa3.25□□□□□ -1.89
CDRT1-207ENST00000583965 KRTAP5-10Q6L8G5 202 aa3.22□□□□□ -1.89
CDRT1-207ENST00000583965 AHNAK2Q8IVF2 5795 aa3.22□□□□□ -1.89
CDRT1-207ENST00000583965 KRTAP5-7Q6L8G8 165 aa3.13□□□□□ -1.91
CDRT1-207ENST00000583965 INE1O15225 51 aa3.06□□□□□ -1.92
CDRT1-207ENST00000583965 OBSCNQ5VST9 7968 aa3.01□□□□□ -1.93
CDRT1-207ENST00000583965 LCE3DQ9BYE3 92 aa2.94□□□□□ -1.94
CDRT1-207ENST00000583965 KRTAP5-8O75690 187 aa2.93□□□□□ -1.94
CDRT1-207ENST00000583965 LCE1EQ5T753 118 aa2.9□□□□□ -1.95
CDRT1-207ENST00000583965 LCE3EQ5T5B0 92 aa2.87□□□□□ -1.95
CDRT1-207ENST00000583965 KRTAP5-1Q6L8H4 278 aa2.87□□□□□ -1.95
CDRT1-207ENST00000583965 AHNAKQ09666 5890 aaKnown RBP2.74□□□□□ -1.97
CDRT1-207ENST00000583965 MUC5ACP98088 5654 aa2.74□□□□□ -1.97
CDRT1-207ENST00000583965 LCE1CQ5T751 118 aa2.69□□□□□ -1.98
CDRT1-207ENST00000583965 LCE1BQ5T7P3 118 aa2.69□□□□□ -1.98
CDRT1-207ENST00000583965 MUC5BQ9HC84 5762 aaPredicted RBP2.69□□□□□ -1.98
CDRT1-207ENST00000583965 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.5□□□□□ -2.01
CDRT1-207ENST00000583965 PRM1P04553 51 aa2.47□□□□□ -2.01
CDRT1-207ENST00000583965 LCE1FQ5T754 118 aa2.44□□□□□ -2.02
CDRT1-207ENST00000583965 KRTAP5-11Q6L8G4 156 aa2.41□□□□□ -2.02
CDRT1-207ENST00000583965 KRTAP21-2Q3LI59 83 aa2.3□□□□□ -2.04
CDRT1-207ENST00000583965 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
CDRT1-207ENST00000583965 KRTAP4-4Q9BYR3 166 aa2.02□□□□□ -2.09
CDRT1-207ENST00000583965 MUC19Q7Z5P9 8384 aa1.81□□□□□ -2.12
CDRT1-207ENST00000583965 KRTAP21-1Q3LI58 79 aa1.54□□□□□ -2.16
CDRT1-207ENST00000583965 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 101.1 ms