RNA–Protein interactions for RNA: ENST00000583908.1

NARF-222, Transcript of nuclear prelamin A recognition factor, human

TSL 3

Gene NARF, Length 430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NARF-222	ENST00000583908	SPRR2A	P35326	72 aa		3.86	□□□□□ -1.79
NARF-222	ENST00000583908	MIR22HG	Q0VDD5	57 aa		3.86	□□□□□ -1.79
NARF-222	ENST00000583908		A0A0A0MQY5	61 aa		3.85	□□□□□ -1.79
NARF-222	ENST00000583908		Q1T7F1	81 aa		3.85	□□□□□ -1.79
NARF-222	ENST00000583908	PSPHP1	O15172	72 aa		3.83	□□□□□ -1.8
NARF-222	ENST00000583908	TNP1	P09430	55 aa		3.82	□□□□□ -1.8
NARF-222	ENST00000583908	KRTAP20-1	Q3LI63	56 aa		3.82	□□□□□ -1.8
NARF-222	ENST00000583908	PMAIP1	Q13794	54 aa		3.78	□□□□□ -1.8
NARF-222	ENST00000583908		A6NED7	52 aa		3.77	□□□□□ -1.81
NARF-222	ENST00000583908	LCE1A	Q5T7P2	110 aa		3.77	□□□□□ -1.81
NARF-222	ENST00000583908	SPRR2D	P22532	72 aa		3.74	□□□□□ -1.81
NARF-222	ENST00000583908	KRTAP2-3	P0C7H8	128 aa		3.73	□□□□□ -1.81
NARF-222	ENST00000583908	KRTAP2-4	Q9BYR9	128 aa		3.73	□□□□□ -1.81
NARF-222	ENST00000583908	C10orf95	Q9H7T3	257 aa		3.73	□□□□□ -1.81
NARF-222	ENST00000583908	BRK1	Q8WUW1	75 aa		3.71	□□□□□ -1.82
NARF-222	ENST00000583908	KRTAP19-7	Q3SYF9	63 aa		3.68	□□□□□ -1.82
NARF-222	ENST00000583908	MT1E	P04732	61 aa		3.67	□□□□□ -1.82
NARF-222	ENST00000583908	KRTAP25-1	Q3LHN0	102 aa		3.67	□□□□□ -1.82
NARF-222	ENST00000583908	KRTAP19-5	Q3LI72	72 aa		3.65	□□□□□ -1.83
NARF-222	ENST00000583908	LCE3A	Q5TA76	89 aa		3.65	□□□□□ -1.83
NARF-222	ENST00000583908	KRTAP19-3	Q7Z4W3	81 aa		3.64	□□□□□ -1.83
NARF-222	ENST00000583908	PP632	Q6XCG6	107 aa		3.63	□□□□□ -1.83
NARF-222	ENST00000583908	KTN1-AS1	Q86SY8	53 aa		3.63	□□□□□ -1.83
NARF-222	ENST00000583908	KRTAP2-2	Q9BYT5	123 aa		3.62	□□□□□ -1.83
NARF-222	ENST00000583908	KRTAP2-1	Q9BYU5	128 aa		3.62	□□□□□ -1.83
NARF-222	ENST00000583908	CDC42SE1	Q9NRR8	79 aa		3.62	□□□□□ -1.83
NARF-222	ENST00000583908	MT1G	P13640	62 aa		3.57	□□□□□ -1.84
NARF-222	ENST00000583908	KRTAP12-3	P60328	96 aa		3.55	□□□□□ -1.84
NARF-222	ENST00000583908	ROMO1	P60602	79 aa		3.53	□□□□□ -1.84
NARF-222	ENST00000583908	MT1L	Q93083	61 aa		3.52	□□□□□ -1.85
NARF-222	ENST00000583908	DST	Q03001	7570 aa	Known RBP	3.49	□□□□□ -1.85
NARF-222	ENST00000583908	MT1M	Q8N339	61 aa		3.48	□□□□□ -1.85
NARF-222	ENST00000583908	GPR98	Q8WXG9	6306 aa		3.44	□□□□□ -1.86
NARF-222	ENST00000583908	KRTAP5-3	Q6L8H2	238 aa		3.33	□□□□□ -1.88
NARF-222	ENST00000583908	KRTAP4-3	Q9BYR4	195 aa		3.32	□□□□□ -1.88
NARF-222	ENST00000583908	LCE3C	Q5T5A8	94 aa		3.26	□□□□□ -1.89
NARF-222	ENST00000583908	MT4	P47944	62 aa		3.23	□□□□□ -1.89
NARF-222	ENST00000583908	KRTAP5-4	Q6L8H1	288 aa		3.22	□□□□□ -1.89
NARF-222	ENST00000583908	PRAC1	Q96KF2	57 aa		3.21	□□□□□ -1.9
NARF-222	ENST00000583908	HMCN1	Q96RW7	5635 aa		3.18	□□□□□ -1.9
NARF-222	ENST00000583908	MT3	P25713	68 aa		3.17	□□□□□ -1.9
NARF-222	ENST00000583908	KRTAP12-4	P60329	112 aa		3.15	□□□□□ -1.91
NARF-222	ENST00000583908	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.15	□□□□□ -1.91
NARF-222	ENST00000583908	SPRR5	A0A1B0GTR4	108 aa		3.09	□□□□□ -1.91
NARF-222	ENST00000583908	AHNAK2	Q8IVF2	5795 aa		3.08	□□□□□ -1.92
NARF-222	ENST00000583908	NDUFAF8	A1L188	74 aa		3.06	□□□□□ -1.92
NARF-222	ENST00000583908	KRTAP20-2	Q3LI61	65 aa		3.04	□□□□□ -1.92
NARF-222	ENST00000583908	KRTAP5-10	Q6L8G5	202 aa		3.04	□□□□□ -1.92
NARF-222	ENST00000583908	MT1A	P04731	61 aa		3.02	□□□□□ -1.93
NARF-222	ENST00000583908	KRTAP9-6	A8MVA2	160 aa		2.98	□□□□□ -1.93
NARF-222	ENST00000583908	KRTAP5-7	Q6L8G8	165 aa		2.97	□□□□□ -1.93
NARF-222	ENST00000583908	SYNE1	Q8NF91	8797 aa	Known RBP	2.96	□□□□□ -1.94
NARF-222	ENST00000583908	KRTAP6-1	Q3LI64	71 aa		2.95	□□□□□ -1.94
NARF-222	ENST00000583908	LUZP6	Q538Z0	58 aa		2.94	□□□□□ -1.94
NARF-222	ENST00000583908	LCE1F	Q5T754	118 aa		2.9	□□□□□ -1.95
NARF-222	ENST00000583908	KRTAP5-2	Q701N4	177 aa		2.84	□□□□□ -1.95
NARF-222	ENST00000583908	KRTAP6-2	Q3LI66	62 aa		2.81	□□□□□ -1.96
NARF-222	ENST00000583908	LCE1E	Q5T753	118 aa		2.77	□□□□□ -1.97
NARF-222	ENST00000583908	KRTAP5-11	Q6L8G4	156 aa		2.7	□□□□□ -1.98
NARF-222	ENST00000583908	OBSCN	Q5VST9	7968 aa		2.65	□□□□□ -1.99
NARF-222	ENST00000583908	KRTAP5-8	O75690	187 aa		2.62	□□□□□ -1.99
NARF-222	ENST00000583908	AHNAK	Q09666	5890 aa	Known RBP	2.62	□□□□□ -1.99
NARF-222	ENST00000583908	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.58	□□□□□ -2
NARF-222	ENST00000583908	MUC5AC	P98088	5654 aa		2.58	□□□□□ -2
NARF-222	ENST00000583908	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.53	□□□□□ -2
NARF-222	ENST00000583908	LCE3E	Q5T5B0	92 aa		2.52	□□□□□ -2.01
NARF-222	ENST00000583908	INE1	O15225	51 aa		2.51	□□□□□ -2.01
NARF-222	ENST00000583908	KRTAP5-1	Q6L8H4	278 aa		2.51	□□□□□ -2.01
NARF-222	ENST00000583908	LCE3D	Q9BYE3	92 aa		2.41	□□□□□ -2.02
NARF-222	ENST00000583908	LCE1B	Q5T7P3	118 aa		2.35	□□□□□ -2.03
NARF-222	ENST00000583908	LCE1C	Q5T751	118 aa		2.33	□□□□□ -2.04
NARF-222	ENST00000583908	KRTAP4-4	Q9BYR3	166 aa		2.12	□□□□□ -2.07
NARF-222	ENST00000583908	KRTAP21-2	Q3LI59	83 aa		1.93	□□□□□ -2.1
NARF-222	ENST00000583908	PHGR1	C9JFL3	82 aa		1.79	□□□□□ -2.12
NARF-222	ENST00000583908	PRM1	P04553	51 aa		1.78	□□□□□ -2.12
NARF-222	ENST00000583908	MUC19	Q7Z5P9	8384 aa		1.6	□□□□□ -2.15
NARF-222	ENST00000583908	KRTAP21-1	Q3LI58	79 aa		1.35	□□□□□ -2.19
NARF-222	ENST00000583908	MUC16	Q8WXI7	14507 aa		1.15	□□□□□ -2.23

Retrieved 78 of 20,778 RNA–protein pairs in 1104.7 ms