RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 KRTAP4-6Q9BYQ5 205 aa8.03□□□□□ -1.12
SRSF1-206ENST00000583741 DSTQ03001 7570 aaKnown RBP8.03□□□□□ -1.12
SRSF1-206ENST00000583741 PMAIP1Q13794 54 aa7.98□□□□□ -1.13
SRSF1-206ENST00000583741 ROMO1P60602 79 aa7.96□□□□□ -1.13
SRSF1-206ENST00000583741 KRTAP4-9Q9BYQ8 210 aa7.87□□□□□ -1.15
SRSF1-206ENST00000583741 TNP1P09430 55 aa7.87□□□□□ -1.15
SRSF1-206ENST00000583741 KRTAP25-1Q3LHN0 102 aa7.81□□□□□ -1.16
SRSF1-206ENST00000583741 LCE5AQ5TCM9 118 aa7.76□□□□□ -1.17
SRSF1-206ENST00000583741 KRTAP19-7Q3SYF9 63 aa7.69□□□□□ -1.18
SRSF1-206ENST00000583741 KRTAP19-3Q7Z4W3 81 aa7.66□□□□□ -1.18
SRSF1-206ENST00000583741 MT1EP04732 61 aa7.64□□□□□ -1.19
SRSF1-206ENST00000583741 LCE1DQ5T752 114 aa7.62□□□□□ -1.19
SRSF1-206ENST00000583741 HMCN1Q96RW7 5635 aa7.59□□□□□ -1.19
SRSF1-206ENST00000583741 LCE3AQ5TA76 89 aa7.57□□□□□ -1.2
SRSF1-206ENST00000583741 KTN1-AS1Q86SY8 53 aa7.56□□□□□ -1.2
SRSF1-206ENST00000583741 KRTAP23-1A1A580 65 aa7.54□□□□□ -1.2
SRSF1-206ENST00000583741 PRAC1Q96KF2 57 aa7.49□□□□□ -1.21
SRSF1-206ENST00000583741 PP632Q6XCG6 107 aa7.49□□□□□ -1.21
SRSF1-206ENST00000583741 MT4P47944 62 aa7.47□□□□□ -1.21
SRSF1-206ENST00000583741 AHNAK2Q8IVF2 5795 aa7.46□□□□□ -1.22
SRSF1-206ENST00000583741 LCE4AQ5TA78 99 aa7.43□□□□□ -1.22
SRSF1-206ENST00000583741 MT1GP13640 62 aa7.4□□□□□ -1.22
SRSF1-206ENST00000583741 KRTAP19-5Q3LI72 72 aa7.36□□□□□ -1.23
SRSF1-206ENST00000583741 KRTAP5-10Q6L8G5 202 aa7.32□□□□□ -1.24
SRSF1-206ENST00000583741 MT1MQ8N339 61 aa7.31□□□□□ -1.24
SRSF1-206ENST00000583741 KRTAP12-3P60328 96 aa7.28□□□□□ -1.24
SRSF1-206ENST00000583741 KRTAP5-4Q6L8H1 288 aa7.25□□□□□ -1.25
SRSF1-206ENST00000583741 MT1LQ93083 61 aa7.22□□□□□ -1.25
SRSF1-206ENST00000583741 KRTAP4-3Q9BYR4 195 aa7.19□□□□□ -1.26
SRSF1-206ENST00000583741 SVIPQ8NHG7 77 aa7.17□□□□□ -1.26
SRSF1-206ENST00000583741 KRTAP5-7Q6L8G8 165 aa7.09□□□□□ -1.27
SRSF1-206ENST00000583741 KRTAP15-1Q3LI76 137 aa7.06□□□□□ -1.28
SRSF1-206ENST00000583741 KRTAP5-3Q6L8H2 238 aa7.04□□□□□ -1.28
SRSF1-206ENST00000583741 KRTAP4-12Q9BQ66 201 aa6.98□□□□□ -1.29
SRSF1-206ENST00000583741 KRTAP20-2Q3LI61 65 aa6.88□□□□□ -1.31
SRSF1-206ENST00000583741 KRTAP4-7Q9BYR0 210 aa6.88□□□□□ -1.31
SRSF1-206ENST00000583741 KRTAP19-4Q3LI73 84 aa6.86□□□□□ -1.31
SRSF1-206ENST00000583741 KRTAP9-9Q9BYP9 154 aa6.84□□□□□ -1.31
SRSF1-206ENST00000583741 KRTAP9-4Q9BYQ2 154 aa6.84□□□□□ -1.31
SRSF1-206ENST00000583741 LCE3CQ5T5A8 94 aa6.78□□□□□ -1.32
SRSF1-206ENST00000583741 SPRR5A0A1B0GTR4 108 aa6.76□□□□□ -1.33
SRSF1-206ENST00000583741 KRTAP5-5Q701N2 237 aaPredicted RBP6.76□□□□□ -1.33
SRSF1-206ENST00000583741 KRTAP12-4P60329 112 aa6.64□□□□□ -1.35
SRSF1-206ENST00000583741 SYNE1Q8NF91 8797 aaKnown RBP6.62□□□□□ -1.35
SRSF1-206ENST00000583741 KRTAP9-6A8MVA2 160 aa6.39□□□□□ -1.39
SRSF1-206ENST00000583741 KRTAP4-11Q9BYQ6 195 aa6.39□□□□□ -1.39
SRSF1-206ENST00000583741 KRTAP5-2Q701N4 177 aa6.27□□□□□ -1.41
SRSF1-206ENST00000583741 MUC5ACP98088 5654 aa6.26□□□□□ -1.41
SRSF1-206ENST00000583741 AHNAKQ09666 5890 aaKnown RBP6.25□□□□□ -1.41
SRSF1-206ENST00000583741 KRTAP4-2Q9BYR5 136 aa6.24□□□□□ -1.41
SRSF1-206ENST00000583741 MUC5BQ9HC84 5762 aaPredicted RBP6.23□□□□□ -1.41
SRSF1-206ENST00000583741 KRTAP5-8O75690 187 aa6.2□□□□□ -1.42
SRSF1-206ENST00000583741 LUZP6Q538Z0 58 aa6.18□□□□□ -1.42
SRSF1-206ENST00000583741 KRTAP6-1Q3LI64 71 aa6.15□□□□□ -1.43
SRSF1-206ENST00000583741 MT1AP04731 61 aa6.12□□□□□ -1.43
SRSF1-206ENST00000583741 OBSCNQ5VST9 7968 aa6.11□□□□□ -1.43
SRSF1-206ENST00000583741 KRTAP6-2Q3LI66 62 aa5.96□□□□□ -1.46
SRSF1-206ENST00000583741 NDUFAF8A1L188 74 aa5.82□□□□□ -1.48
SRSF1-206ENST00000583741 KRTAP5-1Q6L8H4 278 aa5.71□□□□□ -1.49
SRSF1-206ENST00000583741 H3BS24 57 aa5.64□□□□□ -1.51
SRSF1-206ENST00000583741 MT3P25713 68 aa5.59□□□□□ -1.51
SRSF1-206ENST00000583741 LCE1EQ5T753 118 aa5.25□□□□□ -1.57
SRSF1-206ENST00000583741 LCE3DQ9BYE3 92 aa5.06□□□□□ -1.6
SRSF1-206ENST00000583741 A0A0A0MQY5 61 aa5.05□□□□□ -1.6
SRSF1-206ENST00000583741 LCE1BQ5T7P3 118 aa5.01□□□□□ -1.61
SRSF1-206ENST00000583741 LCE3EQ5T5B0 92 aa4.88□□□□□ -1.63
SRSF1-206ENST00000583741 LCE1CQ5T751 118 aa4.88□□□□□ -1.63
SRSF1-206ENST00000583741 INE1O15225 51 aa4.8□□□□□ -1.64
SRSF1-206ENST00000583741 KRTAP5-11Q6L8G4 156 aa4.51□□□□□ -1.69
SRSF1-206ENST00000583741 LCE1FQ5T754 118 aa4.44□□□□□ -1.7
SRSF1-206ENST00000583741 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.39□□□□□ -1.71
SRSF1-206ENST00000583741 PHGR1C9JFL3 82 aa4.28□□□□□ -1.72
SRSF1-206ENST00000583741 PRM1P04553 51 aa4.13□□□□□ -1.75
SRSF1-206ENST00000583741 KRTAP21-2Q3LI59 83 aa4.05□□□□□ -1.76
SRSF1-206ENST00000583741 KRTAP4-4Q9BYR3 166 aa3.8□□□□□ -1.8
SRSF1-206ENST00000583741 MUC19Q7Z5P9 8384 aa3.78□□□□□ -1.8
SRSF1-206ENST00000583741 KRTAP21-1Q3LI58 79 aa3.22□□□□□ -1.89
SRSF1-206ENST00000583741 MUC16Q8WXI7 14507 aa2.6□□□□□ -1.99
Retrieved 78 of 20,778 RNA–protein pairs in 520.5 ms