RNA–Protein interactions for RNA: ENST00000583593.2

CCDC57-218, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-218ENST00000583593 TNP1P09430 55 aa4.47□□□□□ -1.69
CCDC57-218ENST00000583593 SERP2Q8N6R1 65 aa4.47□□□□□ -1.69
CCDC57-218ENST00000583593 SPRR5A0A1B0GTR4 108 aa4.45□□□□□ -1.7
CCDC57-218ENST00000583593 A8MU10 97 aa4.44□□□□□ -1.7
CCDC57-218ENST00000583593 SMIM26A0A096LP01 95 aa4.4□□□□□ -1.71
CCDC57-218ENST00000583593 K7ERU9 68 aa4.4□□□□□ -1.71
CCDC57-218ENST00000583593 KRTAP12-3P60328 96 aa4.4□□□□□ -1.71
CCDC57-218ENST00000583593 SYNE1Q8NF91 8797 aaKnown RBP4.37□□□□□ -1.71
CCDC57-218ENST00000583593 KRTAP12-4P60329 112 aa4.36□□□□□ -1.71
CCDC57-218ENST00000583593 LOC100996750A0A140TA64 210 aa4.33□□□□□ -1.72
CCDC57-218ENST00000583593 A0A1B0GU69 56 aa4.33□□□□□ -1.72
CCDC57-218ENST00000583593 H7BZZ5 65 aa4.28□□□□□ -1.72
CCDC57-218ENST00000583593 COX7CP15954 63 aa4.24□□□□□ -1.73
CCDC57-218ENST00000583593 KRTAP4-11Q9BYQ6 195 aa4.2□□□□□ -1.74
CCDC57-218ENST00000583593 KRTAP5-2Q701N4 177 aa4.15□□□□□ -1.75
CCDC57-218ENST00000583593 KRTAP19-4Q3LI73 84 aa4.1□□□□□ -1.75
CCDC57-218ENST00000583593 KRTAP5-8O75690 187 aa4.08□□□□□ -1.76
CCDC57-218ENST00000583593 PRR15LQ9BU68 103 aa4.07□□□□□ -1.76
CCDC57-218ENST00000583593 KRTAP25-1Q3LHN0 102 aa4.06□□□□□ -1.76
CCDC57-218ENST00000583593 KRTAP6-1Q3LI64 71 aa4.06□□□□□ -1.76
CCDC57-218ENST00000583593 MT1AP04731 61 aa4.04□□□□□ -1.76
CCDC57-218ENST00000583593 LCE3CQ5T5A8 94 aa4.03□□□□□ -1.76
CCDC57-218ENST00000583593 LINC01558Q9Y6Z2 57 aa4.02□□□□□ -1.77
CCDC57-218ENST00000583593 KRTAP15-1Q3LI76 137 aa4□□□□□ -1.77
CCDC57-218ENST00000583593 MUC5ACP98088 5654 aa4□□□□□ -1.77
CCDC57-218ENST00000583593 AHNAKQ09666 5890 aaKnown RBP3.99□□□□□ -1.77
CCDC57-218ENST00000583593 MUC5BQ9HC84 5762 aaPredicted RBP3.98□□□□□ -1.77
CCDC57-218ENST00000583593 OBSCNQ5VST9 7968 aa3.97□□□□□ -1.77
CCDC57-218ENST00000583593 UQCR11O14957 56 aa3.96□□□□□ -1.78
CCDC57-218ENST00000583593 KRTAP9-4Q9BYQ2 154 aa3.95□□□□□ -1.78
CCDC57-218ENST00000583593 KRTAP6-2Q3LI66 62 aa3.92□□□□□ -1.78
CCDC57-218ENST00000583593 KRTAP23-1A1A580 65 aa3.91□□□□□ -1.78
CCDC57-218ENST00000583593 ANAPC13Q9BS18 74 aa3.88□□□□□ -1.79
CCDC57-218ENST00000583593 KRTAP9-9Q9BYP9 154 aa3.88□□□□□ -1.79
CCDC57-218ENST00000583593 CCDC179H3BU77 68 aa3.87□□□□□ -1.79
CCDC57-218ENST00000583593 KRTAP9-6A8MVA2 160 aa3.86□□□□□ -1.79
CCDC57-218ENST00000583593 ATP5EP56381 51 aaPredicted RBP3.86□□□□□ -1.79
CCDC57-218ENST00000583593 MIR22HGQ0VDD5 57 aa3.85□□□□□ -1.79
CCDC57-218ENST00000583593 KRTAP5-1Q6L8H4 278 aa3.78□□□□□ -1.8
CCDC57-218ENST00000583593 K7ERS5 55 aa3.77□□□□□ -1.81
CCDC57-218ENST00000583593 MT3P25713 68 aa3.69□□□□□ -1.82
CCDC57-218ENST00000583593 TMEM258P61165 79 aa3.65□□□□□ -1.83
CCDC57-218ENST00000583593 PSPHP1O15172 72 aa3.6□□□□□ -1.83
CCDC57-218ENST00000583593 RPS28P62857 69 aaKnown RBP3.59□□□□□ -1.83
CCDC57-218ENST00000583593 Q1T7F1 81 aa3.59□□□□□ -1.83
CCDC57-218ENST00000583593 CDC42SE1Q9NRR8 79 aa3.56□□□□□ -1.84
CCDC57-218ENST00000583593 ROMO1P60602 79 aa3.51□□□□□ -1.85
CCDC57-218ENST00000583593 V9GYY9 64 aa3.5□□□□□ -1.85
CCDC57-218ENST00000583593 LCE1EQ5T753 118 aa3.48□□□□□ -1.85
CCDC57-218ENST00000583593 A6NED7 52 aa3.43□□□□□ -1.86
CCDC57-218ENST00000583593 KRTAP4-2Q9BYR5 136 aa3.35□□□□□ -1.87
CCDC57-218ENST00000583593 LCE1BQ5T7P3 118 aa3.29□□□□□ -1.88
CCDC57-218ENST00000583593 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
CCDC57-218ENST00000583593 KRTAP4-12Q9BQ66 201 aa3.13□□□□□ -1.91
CCDC57-218ENST00000583593 SVIPQ8NHG7 77 aa3.08□□□□□ -1.92
CCDC57-218ENST00000583593 KRTAP5-11Q6L8G4 156 aa2.98□□□□□ -1.93
CCDC57-218ENST00000583593 LCE1FQ5T754 118 aa2.93□□□□□ -1.94
CCDC57-218ENST00000583593 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.92□□□□□ -1.94
CCDC57-218ENST00000583593 LCE3DQ9BYE3 92 aa2.83□□□□□ -1.96
CCDC57-218ENST00000583593 PHGR1C9JFL3 82 aa2.79□□□□□ -1.96
CCDC57-218ENST00000583593 H3BS24 57 aa2.69□□□□□ -1.98
CCDC57-218ENST00000583593 KRTAP21-2Q3LI59 83 aa2.69□□□□□ -1.98
CCDC57-218ENST00000583593 LCE3EQ5T5B0 92 aa2.61□□□□□ -1.99
CCDC57-218ENST00000583593 PCP4P48539 62 aa2.58□□□□□ -2
CCDC57-218ENST00000583593 BRK1Q8WUW1 75 aa2.54□□□□□ -2
CCDC57-218ENST00000583593 KRTAP4-4Q9BYR3 166 aa2.5□□□□□ -2.01
CCDC57-218ENST00000583593 MUC19Q7Z5P9 8384 aa2.45□□□□□ -2.02
CCDC57-218ENST00000583593 PRAC1Q96KF2 57 aa2.43□□□□□ -2.02
CCDC57-218ENST00000583593 A0A0A0MQY5 61 aa2.41□□□□□ -2.02
CCDC57-218ENST00000583593 PMAIP1Q13794 54 aa2.36□□□□□ -2.03
CCDC57-218ENST00000583593 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
CCDC57-218ENST00000583593 LUZP6Q538Z0 58 aa2.03□□□□□ -2.08
CCDC57-218ENST00000583593 KTN1-AS1Q86SY8 53 aa1.86□□□□□ -2.11
CCDC57-218ENST00000583593 PRO0628Q9UI54 55 aa1.83□□□□□ -2.12
CCDC57-218ENST00000583593 PRM1P04553 51 aa1.79□□□□□ -2.12
CCDC57-218ENST00000583593 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
CCDC57-218ENST00000583593 NDUFAF8A1L188 74 aa1.67□□□□□ -2.14
CCDC57-218ENST00000583593 INE1O15225 51 aa1.15□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 75.3 ms