RNA–Protein interactions for RNA: ENST00000583514.5

LLGL2-221, Transcript of LLGL2, scribble cell polarity complex component, human

TSL 3

Gene LLGL2, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LLGL2-221	ENST00000583514	KRTAP25-1	Q3LHN0	102 aa		6.21	□□□□□ -1.42
LLGL2-221	ENST00000583514	PRAC1	Q96KF2	57 aa		6.2	□□□□□ -1.42
LLGL2-221	ENST00000583514	KRTAP10-12	P60413	245 aa		6.18	□□□□□ -1.42
LLGL2-221	ENST00000583514	TNP1	P09430	55 aa		6.12	□□□□□ -1.43
LLGL2-221	ENST00000583514	KRTAP23-1	A1A580	65 aa		6.1	□□□□□ -1.43
LLGL2-221	ENST00000583514	LCE3B	Q5TA77	95 aa		6.1	□□□□□ -1.43
LLGL2-221	ENST00000583514	PP632	Q6XCG6	107 aa		6.07	□□□□□ -1.44
LLGL2-221	ENST00000583514	DST	Q03001	7570 aa	Known RBP	5.83	□□□□□ -1.48
LLGL2-221	ENST00000583514	KRTAP19-7	Q3SYF9	63 aa		5.83	□□□□□ -1.48
LLGL2-221	ENST00000583514	LCE5A	Q5TCM9	118 aa		5.82	□□□□□ -1.48
LLGL2-221	ENST00000583514	MT1E	P04732	61 aa		5.79	□□□□□ -1.48
LLGL2-221	ENST00000583514	KRTAP19-3	Q7Z4W3	81 aa		5.78	□□□□□ -1.48
LLGL2-221	ENST00000583514	KRTAP4-9	Q9BYQ8	210 aa		5.75	□□□□□ -1.49
LLGL2-221	ENST00000583514	GPR98	Q8WXG9	6306 aa		5.74	□□□□□ -1.49
LLGL2-221	ENST00000583514	LCE3A	Q5TA76	89 aa		5.73	□□□□□ -1.49
LLGL2-221	ENST00000583514	KRTAP19-5	Q3LI72	72 aa		5.66	□□□□□ -1.5
LLGL2-221	ENST00000583514	MT1G	P13640	62 aa		5.62	□□□□□ -1.51
LLGL2-221	ENST00000583514	KRTAP12-3	P60328	96 aa		5.57	□□□□□ -1.52
LLGL2-221	ENST00000583514	LCE1D	Q5T752	114 aa		5.57	□□□□□ -1.52
LLGL2-221	ENST00000583514	HMCN1	Q96RW7	5635 aa		5.54	□□□□□ -1.52
LLGL2-221	ENST00000583514	MT1M	Q8N339	61 aa		5.53	□□□□□ -1.52
LLGL2-221	ENST00000583514	MT1L	Q93083	61 aa		5.51	□□□□□ -1.53
LLGL2-221	ENST00000583514	MT4	P47944	62 aa		5.5	□□□□□ -1.53
LLGL2-221	ENST00000583514	KRTAP15-1	Q3LI76	137 aa		5.5	□□□□□ -1.53
LLGL2-221	ENST00000583514	LCE4A	Q5TA78	99 aa		5.5	□□□□□ -1.53
LLGL2-221	ENST00000583514	KRTAP19-4	Q3LI73	84 aa		5.48	□□□□□ -1.53
LLGL2-221	ENST00000583514	KRTAP4-3	Q9BYR4	195 aa		5.43	□□□□□ -1.54
LLGL2-221	ENST00000583514	AHNAK2	Q8IVF2	5795 aa		5.36	□□□□□ -1.55
LLGL2-221	ENST00000583514	KRTAP5-4	Q6L8H1	288 aa		5.36	□□□□□ -1.55
LLGL2-221	ENST00000583514	SPRR5	A0A1B0GTR4	108 aa		5.34	□□□□□ -1.55
LLGL2-221	ENST00000583514	KRTAP4-6	Q9BYQ5	205 aa		5.32	□□□□□ -1.56
LLGL2-221	ENST00000583514	KRTAP5-10	Q6L8G5	202 aa		5.26	□□□□□ -1.57
LLGL2-221	ENST00000583514	KRTAP4-7	Q9BYR0	210 aa		5.26	□□□□□ -1.57
LLGL2-221	ENST00000583514	LCE3C	Q5T5A8	94 aa		5.22	□□□□□ -1.57
LLGL2-221	ENST00000583514	LUZP6	Q538Z0	58 aa		5.21	□□□□□ -1.58
LLGL2-221	ENST00000583514	KRTAP5-3	Q6L8H2	238 aa		5.1	□□□□□ -1.59
LLGL2-221	ENST00000583514	KRTAP20-2	Q3LI61	65 aa		5.09	□□□□□ -1.59
LLGL2-221	ENST00000583514	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.08	□□□□□ -1.6
LLGL2-221	ENST00000583514	KRTAP5-7	Q6L8G8	165 aa		5.07	□□□□□ -1.6
LLGL2-221	ENST00000583514	NDUFAF8	A1L188	74 aa		5	□□□□□ -1.61
LLGL2-221	ENST00000583514	KRTAP12-4	P60329	112 aa		5	□□□□□ -1.61
LLGL2-221	ENST00000583514	LOC100996750	A0A140TA64	210 aa		4.99	□□□□□ -1.61
LLGL2-221	ENST00000583514	SYNE1	Q8NF91	8797 aa	Known RBP	4.94	□□□□□ -1.62
LLGL2-221	ENST00000583514	KRTAP9-6	A8MVA2	160 aa		4.83	□□□□□ -1.64
LLGL2-221	ENST00000583514	KRTAP4-11	Q9BYQ6	195 aa		4.69	□□□□□ -1.66
LLGL2-221	ENST00000583514	KRTAP6-1	Q3LI64	71 aa		4.68	□□□□□ -1.66
LLGL2-221	ENST00000583514	MT1A	P04731	61 aa		4.67	□□□□□ -1.66
LLGL2-221	ENST00000583514	KRTAP5-2	Q701N4	177 aa		4.66	□□□□□ -1.66
LLGL2-221	ENST00000583514		A0A0A0MQY5	61 aa		4.55	□□□□□ -1.68
LLGL2-221	ENST00000583514	KRTAP5-8	O75690	187 aa		4.54	□□□□□ -1.68
LLGL2-221	ENST00000583514	KRTAP9-4	Q9BYQ2	154 aa		4.54	□□□□□ -1.68
LLGL2-221	ENST00000583514	KRTAP6-2	Q3LI66	62 aa		4.51	□□□□□ -1.69
LLGL2-221	ENST00000583514	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.49	□□□□□ -1.69
LLGL2-221	ENST00000583514	AHNAK	Q09666	5890 aa	Known RBP	4.47	□□□□□ -1.69
LLGL2-221	ENST00000583514	MUC5AC	P98088	5654 aa		4.46	□□□□□ -1.69
LLGL2-221	ENST00000583514		H3BS24	57 aa		4.46	□□□□□ -1.7
LLGL2-221	ENST00000583514	OBSCN	Q5VST9	7968 aa		4.43	□□□□□ -1.7
LLGL2-221	ENST00000583514	KRTAP9-9	Q9BYP9	154 aa		4.34	□□□□□ -1.71
LLGL2-221	ENST00000583514	INE1	O15225	51 aa		4.3	□□□□□ -1.72
LLGL2-221	ENST00000583514	MT3	P25713	68 aa		4.29	□□□□□ -1.72
LLGL2-221	ENST00000583514	KRTAP5-1	Q6L8H4	278 aa		4.23	□□□□□ -1.73
LLGL2-221	ENST00000583514	LCE1E	Q5T753	118 aa		3.97	□□□□□ -1.77
LLGL2-221	ENST00000583514	LCE3D	Q9BYE3	92 aa		3.94	□□□□□ -1.78
LLGL2-221	ENST00000583514	LCE3E	Q5T5B0	92 aa		3.85	□□□□□ -1.79
LLGL2-221	ENST00000583514	LCE1B	Q5T7P3	118 aa		3.79	□□□□□ -1.8
LLGL2-221	ENST00000583514	KRTAP4-2	Q9BYR5	136 aa		3.78	□□□□□ -1.8
LLGL2-221	ENST00000583514	LCE1C	Q5T751	118 aa		3.69	□□□□□ -1.82
LLGL2-221	ENST00000583514	KRTAP4-12	Q9BQ66	201 aa		3.53	□□□□□ -1.84
LLGL2-221	ENST00000583514	KRTAP5-11	Q6L8G4	156 aa		3.35	□□□□□ -1.87
LLGL2-221	ENST00000583514	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.32	□□□□□ -1.88
LLGL2-221	ENST00000583514	PRM1	P04553	51 aa		3.3	□□□□□ -1.88
LLGL2-221	ENST00000583514	LCE1F	Q5T754	118 aa		3.3	□□□□□ -1.88
LLGL2-221	ENST00000583514	PHGR1	C9JFL3	82 aa		3.08	□□□□□ -1.92
LLGL2-221	ENST00000583514	KRTAP21-2	Q3LI59	83 aa		3.08	□□□□□ -1.92
LLGL2-221	ENST00000583514	KRTAP4-4	Q9BYR3	166 aa		2.88	□□□□□ -1.95
LLGL2-221	ENST00000583514	MUC19	Q7Z5P9	8384 aa		2.76	□□□□□ -1.97
LLGL2-221	ENST00000583514	KRTAP21-1	Q3LI58	79 aa		2.33	□□□□□ -2.04
LLGL2-221	ENST00000583514	MUC16	Q8WXI7	14507 aa		1.94	□□□□□ -2.1

Retrieved 78 of 20,778 RNA–protein pairs in 89.7 ms