RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 HMCN1Q96RW7 5635 aa4.64□□□□□ -1.67
TOP3A-215ENST00000583328 KRTAP19-3Q7Z4W3 81 aa4.64□□□□□ -1.67
TOP3A-215ENST00000583328 MT4P47944 62 aa4.63□□□□□ -1.67
TOP3A-215ENST00000583328 MIR22HGQ0VDD5 57 aa4.62□□□□□ -1.67
TOP3A-215ENST00000583328 AHNAK2Q8IVF2 5795 aa4.61□□□□□ -1.67
TOP3A-215ENST00000583328 KRTAP19-7Q3SYF9 63 aa4.6□□□□□ -1.67
TOP3A-215ENST00000583328 LCE4AQ5TA78 99 aa4.6□□□□□ -1.67
TOP3A-215ENST00000583328 MT1EP04732 61 aa4.59□□□□□ -1.67
TOP3A-215ENST00000583328 KRTAP4-12Q9BQ66 201 aa4.58□□□□□ -1.68
TOP3A-215ENST00000583328 KRTAP5-10Q6L8G5 202 aa4.57□□□□□ -1.68
TOP3A-215ENST00000583328 A6NED7 52 aa4.55□□□□□ -1.68
TOP3A-215ENST00000583328 KRTAP9-9Q9BYP9 154 aa4.54□□□□□ -1.68
TOP3A-215ENST00000583328 KRTAP9-4Q9BYQ2 154 aa4.54□□□□□ -1.68
TOP3A-215ENST00000583328 K7ERS5 55 aa4.5□□□□□ -1.69
TOP3A-215ENST00000583328 MT1GP13640 62 aa4.49□□□□□ -1.69
TOP3A-215ENST00000583328 PP632Q6XCG6 107 aa4.47□□□□□ -1.69
TOP3A-215ENST00000583328 C10orf95Q9H7T3 257 aa4.47□□□□□ -1.69
TOP3A-215ENST00000583328 KRTAP5-7Q6L8G8 165 aa4.45□□□□□ -1.7
TOP3A-215ENST00000583328 TNP1P09430 55 aa4.42□□□□□ -1.7
TOP3A-215ENST00000583328 KRTAP19-5Q3LI72 72 aa4.41□□□□□ -1.7
TOP3A-215ENST00000583328 KRTAP5-4Q6L8H1 288 aa4.41□□□□□ -1.7
TOP3A-215ENST00000583328 CDC42SE1Q9NRR8 79 aa4.41□□□□□ -1.7
TOP3A-215ENST00000583328 MT1MQ8N339 61 aa4.4□□□□□ -1.71
TOP3A-215ENST00000583328 KRTAP5-3Q6L8H2 238 aa4.38□□□□□ -1.71
TOP3A-215ENST00000583328 KRTAP23-1A1A580 65 aa4.37□□□□□ -1.71
TOP3A-215ENST00000583328 SPRR5A0A1B0GTR4 108 aa4.33□□□□□ -1.72
TOP3A-215ENST00000583328 KRTAP4-3Q9BYR4 195 aa4.33□□□□□ -1.72
TOP3A-215ENST00000583328 MT1LQ93083 61 aa4.32□□□□□ -1.72
TOP3A-215ENST00000583328 KRTAP25-1Q3LHN0 102 aa4.31□□□□□ -1.72
TOP3A-215ENST00000583328 LCE3AQ5TA76 89 aa4.29□□□□□ -1.72
TOP3A-215ENST00000583328 KRTAP4-7Q9BYR0 210 aa4.29□□□□□ -1.72
TOP3A-215ENST00000583328 ROMO1P60602 79 aa4.24□□□□□ -1.73
TOP3A-215ENST00000583328 KRTAP20-2Q3LI61 65 aa4.21□□□□□ -1.74
TOP3A-215ENST00000583328 BRK1Q8WUW1 75 aa4.21□□□□□ -1.74
TOP3A-215ENST00000583328 KRTAP19-4Q3LI73 84 aa4.17□□□□□ -1.74
TOP3A-215ENST00000583328 A0A0A0MQY5 61 aa4.16□□□□□ -1.74
TOP3A-215ENST00000583328 KRTAP4-2Q9BYR5 136 aa4.16□□□□□ -1.74
TOP3A-215ENST00000583328 KRTAP12-3P60328 96 aa4.13□□□□□ -1.75
TOP3A-215ENST00000583328 KRTAP12-4P60329 112 aa4.1□□□□□ -1.75
TOP3A-215ENST00000583328 KRTAP5-5Q701N2 237 aaPredicted RBP4.05□□□□□ -1.76
TOP3A-215ENST00000583328 SYNE1Q8NF91 8797 aaKnown RBP4.04□□□□□ -1.76
TOP3A-215ENST00000583328 KRTAP4-11Q9BYQ6 195 aa4□□□□□ -1.77
TOP3A-215ENST00000583328 PMAIP1Q13794 54 aa3.97□□□□□ -1.77
TOP3A-215ENST00000583328 KRTAP15-1Q3LI76 137 aa3.95□□□□□ -1.78
TOP3A-215ENST00000583328 PRO0628Q9UI54 55 aa3.92□□□□□ -1.78
TOP3A-215ENST00000583328 AHNAKQ09666 5890 aaKnown RBP3.91□□□□□ -1.78
TOP3A-215ENST00000583328 MUC5ACP98088 5654 aa3.85□□□□□ -1.79
TOP3A-215ENST00000583328 MUC5BQ9HC84 5762 aaPredicted RBP3.84□□□□□ -1.79
TOP3A-215ENST00000583328 KRTAP5-8O75690 187 aa3.83□□□□□ -1.8
TOP3A-215ENST00000583328 LCE3CQ5T5A8 94 aa3.83□□□□□ -1.8
TOP3A-215ENST00000583328 KRTAP5-2Q701N4 177 aa3.78□□□□□ -1.8
TOP3A-215ENST00000583328 PRAC1Q96KF2 57 aa3.75□□□□□ -1.81
TOP3A-215ENST00000583328 KTN1-AS1Q86SY8 53 aa3.69□□□□□ -1.82
TOP3A-215ENST00000583328 KRTAP6-1Q3LI64 71 aa3.68□□□□□ -1.82
TOP3A-215ENST00000583328 OBSCNQ5VST9 7968 aa3.67□□□□□ -1.82
TOP3A-215ENST00000583328 MT1AP04731 61 aa3.67□□□□□ -1.82
TOP3A-215ENST00000583328 KRTAP6-2Q3LI66 62 aa3.6□□□□□ -1.83
TOP3A-215ENST00000583328 KRTAP9-6A8MVA2 160 aa3.59□□□□□ -1.83
TOP3A-215ENST00000583328 KRTAP5-1Q6L8H4 278 aa3.49□□□□□ -1.85
TOP3A-215ENST00000583328 MT3P25713 68 aa3.4□□□□□ -1.87
TOP3A-215ENST00000583328 NDUFAF8A1L188 74 aa3.23□□□□□ -1.89
TOP3A-215ENST00000583328 LCE1EQ5T753 118 aa3.19□□□□□ -1.9
TOP3A-215ENST00000583328 LUZP6Q538Z0 58 aa3.14□□□□□ -1.91
TOP3A-215ENST00000583328 LCE1BQ5T7P3 118 aa3.09□□□□□ -1.91
TOP3A-215ENST00000583328 LCE1CQ5T751 118 aa2.96□□□□□ -1.94
TOP3A-215ENST00000583328 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.83□□□□□ -1.96
TOP3A-215ENST00000583328 LCE3DQ9BYE3 92 aa2.82□□□□□ -1.96
TOP3A-215ENST00000583328 KRTAP5-11Q6L8G4 156 aa2.76□□□□□ -1.97
TOP3A-215ENST00000583328 LCE1FQ5T754 118 aa2.74□□□□□ -1.97
TOP3A-215ENST00000583328 PHGR1C9JFL3 82 aa2.7□□□□□ -1.98
TOP3A-215ENST00000583328 LCE3EQ5T5B0 92 aa2.7□□□□□ -1.98
TOP3A-215ENST00000583328 KRTAP21-2Q3LI59 83 aa2.41□□□□□ -2.02
TOP3A-215ENST00000583328 KRTAP4-4Q9BYR3 166 aa2.39□□□□□ -2.03
TOP3A-215ENST00000583328 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
TOP3A-215ENST00000583328 INE1O15225 51 aa2.3□□□□□ -2.04
TOP3A-215ENST00000583328 PRM1P04553 51 aa2.18□□□□□ -2.06
TOP3A-215ENST00000583328 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
TOP3A-215ENST00000583328 MUC16Q8WXI7 14507 aa1.64□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 45.3 ms