RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 MACF1Q9UPN3 7388 aaKnown RBP4.63□□□□□ -1.67
CCDC57-216ENST00000582885 LCE3AQ5TA76 89 aa4.58□□□□□ -1.68
CCDC57-216ENST00000582885 KRTAP8-1Q8IUC2 63 aa4.58□□□□□ -1.68
CCDC57-216ENST00000582885 PP632Q6XCG6 107 aa4.56□□□□□ -1.68
CCDC57-216ENST00000582885 KMT2DO14686 5537 aa4.56□□□□□ -1.68
CCDC57-216ENST00000582885 H3BS24 57 aa4.53□□□□□ -1.68
CCDC57-216ENST00000582885 KRTAP5-9P26371 169 aa4.52□□□□□ -1.69
CCDC57-216ENST00000582885 KRTAP6-3Q3LI67 103 aa4.52□□□□□ -1.69
CCDC57-216ENST00000582885 SYNE2Q8WXH0 6885 aaKnown RBP4.5□□□□□ -1.69
CCDC57-216ENST00000582885 KRTAP19-7Q3SYF9 63 aa4.48□□□□□ -1.69
CCDC57-216ENST00000582885 KRTAP19-5Q3LI72 72 aa4.46□□□□□ -1.7
CCDC57-216ENST00000582885 SPRR2FQ96RM1 72 aa4.44□□□□□ -1.7
CCDC57-216ENST00000582885 KRTAP12-3P60328 96 aa4.43□□□□□ -1.7
CCDC57-216ENST00000582885 MT1EP04732 61 aa4.4□□□□□ -1.71
CCDC57-216ENST00000582885 MUC12Q9UKN1 5478 aa4.3□□□□□ -1.72
CCDC57-216ENST00000582885 KRTAP15-1Q3LI76 137 aa4.3□□□□□ -1.72
CCDC57-216ENST00000582885 LCE1AQ5T7P2 110 aa4.3□□□□□ -1.72
CCDC57-216ENST00000582885 KRTAP19-3Q7Z4W3 81 aa4.29□□□□□ -1.72
CCDC57-216ENST00000582885 MT1LQ93083 61 aa4.29□□□□□ -1.72
CCDC57-216ENST00000582885 SPRR2EP22531 72 aa4.27□□□□□ -1.73
CCDC57-216ENST00000582885 SPRR2BP35325 72 aa4.27□□□□□ -1.73
CCDC57-216ENST00000582885 SPRR2AP35326 72 aa4.27□□□□□ -1.73
CCDC57-216ENST00000582885 MT1GP13640 62 aa4.25□□□□□ -1.73
CCDC57-216ENST00000582885 MDN1Q9NU22 5596 aa4.23□□□□□ -1.73
CCDC57-216ENST00000582885 NEBP20929 6669 aa4.19□□□□□ -1.74
CCDC57-216ENST00000582885 MT1MQ8N339 61 aa4.17□□□□□ -1.74
CCDC57-216ENST00000582885 LCE3CQ5T5A8 94 aa4.13□□□□□ -1.75
CCDC57-216ENST00000582885 SPRR2DP22532 72 aa4.12□□□□□ -1.75
CCDC57-216ENST00000582885 NDUFAF8A1L188 74 aa4.06□□□□□ -1.76
CCDC57-216ENST00000582885 KRTAP4-3Q9BYR4 195 aa4.02□□□□□ -1.77
CCDC57-216ENST00000582885 KRTAP2-3P0C7H8 128 aa4□□□□□ -1.77
CCDC57-216ENST00000582885 KRTAP2-4Q9BYR9 128 aa4□□□□□ -1.77
CCDC57-216ENST00000582885 DSTQ03001 7570 aaKnown RBP3.95□□□□□ -1.78
CCDC57-216ENST00000582885 SPRR5A0A1B0GTR4 108 aa3.95□□□□□ -1.78
CCDC57-216ENST00000582885 KRTAP20-1Q3LI63 56 aa3.95□□□□□ -1.78
CCDC57-216ENST00000582885 KRTAP2-2Q9BYT5 123 aa3.89□□□□□ -1.79
CCDC57-216ENST00000582885 KRTAP2-1Q9BYU5 128 aa3.89□□□□□ -1.79
CCDC57-216ENST00000582885 KRTAP9-6A8MVA2 160 aa3.87□□□□□ -1.79
CCDC57-216ENST00000582885 LUZP6Q538Z0 58 aa3.82□□□□□ -1.8
CCDC57-216ENST00000582885 A0A0A0MQY5 61 aa3.8□□□□□ -1.8
CCDC57-216ENST00000582885 KRTAP5-5Q701N2 237 aaPredicted RBP3.79□□□□□ -1.8
CCDC57-216ENST00000582885 KRTAP5-4Q6L8H1 288 aa3.73□□□□□ -1.81
CCDC57-216ENST00000582885 MT1AP04731 61 aa3.67□□□□□ -1.82
CCDC57-216ENST00000582885 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.62□□□□□ -1.83
CCDC57-216ENST00000582885 KRTAP6-1Q3LI64 71 aa3.6□□□□□ -1.83
CCDC57-216ENST00000582885 KRTAP12-4P60329 112 aa3.57□□□□□ -1.84
CCDC57-216ENST00000582885 SYNE1Q8NF91 8797 aaKnown RBP3.57□□□□□ -1.84
CCDC57-216ENST00000582885 MT4P47944 62 aa3.55□□□□□ -1.84
CCDC57-216ENST00000582885 KRTAP5-11Q6L8G4 156 aa3.48□□□□□ -1.85
CCDC57-216ENST00000582885 KRTAP20-2Q3LI61 65 aa3.47□□□□□ -1.85
CCDC57-216ENST00000582885 HMCN1Q96RW7 5635 aa3.46□□□□□ -1.85
CCDC57-216ENST00000582885 INE1O15225 51 aa3.45□□□□□ -1.86
CCDC57-216ENST00000582885 KRTAP6-2Q3LI66 62 aa3.35□□□□□ -1.87
CCDC57-216ENST00000582885 KRTAP5-2Q701N4 177 aa3.35□□□□□ -1.87
CCDC57-216ENST00000582885 MT3P25713 68 aa3.33□□□□□ -1.88
CCDC57-216ENST00000582885 GPR98Q8WXG9 6306 aa3.23□□□□□ -1.89
CCDC57-216ENST00000582885 AHNAK2Q8IVF2 5795 aa3.17□□□□□ -1.9
CCDC57-216ENST00000582885 LCE1EQ5T753 118 aa3.16□□□□□ -1.9
CCDC57-216ENST00000582885 KRTAP5-1Q6L8H4 278 aa3.11□□□□□ -1.91
CCDC57-216ENST00000582885 KRTAP5-10Q6L8G5 202 aa3.09□□□□□ -1.91
CCDC57-216ENST00000582885 LCE3DQ9BYE3 92 aa3.07□□□□□ -1.92
CCDC57-216ENST00000582885 OBSCNQ5VST9 7968 aa3.05□□□□□ -1.92
CCDC57-216ENST00000582885 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
CCDC57-216ENST00000582885 LCE3EQ5T5B0 92 aa2.97□□□□□ -1.93
CCDC57-216ENST00000582885 KRTAP5-8O75690 187 aa2.95□□□□□ -1.94
CCDC57-216ENST00000582885 KRTAP5-7Q6L8G8 165 aa2.91□□□□□ -1.94
CCDC57-216ENST00000582885 MUC5ACP98088 5654 aa2.77□□□□□ -1.97
CCDC57-216ENST00000582885 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
CCDC57-216ENST00000582885 LCE1BQ5T7P3 118 aa2.76□□□□□ -1.97
CCDC57-216ENST00000582885 MUC5BQ9HC84 5762 aaPredicted RBP2.57□□□□□ -2
CCDC57-216ENST00000582885 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
CCDC57-216ENST00000582885 PRM1P04553 51 aa2.46□□□□□ -2.02
CCDC57-216ENST00000582885 KRTAP21-2Q3LI59 83 aa2.38□□□□□ -2.03
CCDC57-216ENST00000582885 LCE1FQ5T754 118 aa2.37□□□□□ -2.03
CCDC57-216ENST00000582885 PHGR1C9JFL3 82 aa2.1□□□□□ -2.07
CCDC57-216ENST00000582885 MUC19Q7Z5P9 8384 aa1.84□□□□□ -2.11
CCDC57-216ENST00000582885 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
CCDC57-216ENST00000582885 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 37.4 ms