RNA–Protein interactions for RNA: ENST00000582629.1

ITGB4-208, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-208ENST00000582629 MT1LQ93083 61 aa5.13□□□□□ -1.59
ITGB4-208ENST00000582629 SMIM26A0A096LP01 95 aa5.08□□□□□ -1.6
ITGB4-208ENST00000582629 PSPHP1O15172 72 aa5.05□□□□□ -1.6
ITGB4-208ENST00000582629 KRTAP5-4Q6L8H1 288 aa5.05□□□□□ -1.6
ITGB4-208ENST00000582629 AHNAK2Q8IVF2 5795 aa5.04□□□□□ -1.6
ITGB4-208ENST00000582629 Q1T7F1 81 aa5.04□□□□□ -1.6
ITGB4-208ENST00000582629 LCE3AQ5TA76 89 aa5.02□□□□□ -1.61
ITGB4-208ENST00000582629 KRTAP4-3Q9BYR4 195 aa5.02□□□□□ -1.61
ITGB4-208ENST00000582629 C10orf95Q9H7T3 257 aa5.02□□□□□ -1.61
ITGB4-208ENST00000582629 UQCR11O14957 56 aa5.01□□□□□ -1.61
ITGB4-208ENST00000582629 RPS28P62857 69 aaKnown RBP5□□□□□ -1.61
ITGB4-208ENST00000582629 V9GYY9 64 aa5□□□□□ -1.61
ITGB4-208ENST00000582629 KRTAP5-10Q6L8G5 202 aa4.99□□□□□ -1.61
ITGB4-208ENST00000582629 TNP1P09430 55 aa4.98□□□□□ -1.61
ITGB4-208ENST00000582629 KRTAP4-6Q9BYQ5 205 aa4.98□□□□□ -1.61
ITGB4-208ENST00000582629 MIR22HGQ0VDD5 57 aa4.95□□□□□ -1.62
ITGB4-208ENST00000582629 A6NED7 52 aa4.85□□□□□ -1.63
ITGB4-208ENST00000582629 KRTAP4-7Q9BYR0 210 aa4.85□□□□□ -1.63
ITGB4-208ENST00000582629 KRTAP12-3P60328 96 aa4.83□□□□□ -1.64
ITGB4-208ENST00000582629 KRTAP5-7Q6L8G8 165 aa4.83□□□□□ -1.64
ITGB4-208ENST00000582629 KRTAP5-3Q6L8H2 238 aa4.83□□□□□ -1.64
ITGB4-208ENST00000582629 KRTAP20-2Q3LI61 65 aa4.78□□□□□ -1.64
ITGB4-208ENST00000582629 KRTAP5-5Q701N2 237 aaPredicted RBP4.76□□□□□ -1.65
ITGB4-208ENST00000582629 SPRR5A0A1B0GTR4 108 aa4.75□□□□□ -1.65
ITGB4-208ENST00000582629 K7ERS5 55 aa4.73□□□□□ -1.65
ITGB4-208ENST00000582629 KRTAP12-4P60329 112 aa4.7□□□□□ -1.66
ITGB4-208ENST00000582629 CDC42SE1Q9NRR8 79 aa4.67□□□□□ -1.66
ITGB4-208ENST00000582629 SYNE1Q8NF91 8797 aaKnown RBP4.62□□□□□ -1.67
ITGB4-208ENST00000582629 LOC100996750A0A140TA64 210 aa4.6□□□□□ -1.67
ITGB4-208ENST00000582629 KRTAP25-1Q3LHN0 102 aa4.6□□□□□ -1.67
ITGB4-208ENST00000582629 KRTAP19-4Q3LI73 84 aa4.57□□□□□ -1.68
ITGB4-208ENST00000582629 ROMO1P60602 79 aa4.53□□□□□ -1.68
ITGB4-208ENST00000582629 BRK1Q8WUW1 75 aa4.46□□□□□ -1.7
ITGB4-208ENST00000582629 KRTAP15-1Q3LI76 137 aa4.43□□□□□ -1.7
ITGB4-208ENST00000582629 LCE3CQ5T5A8 94 aa4.42□□□□□ -1.7
ITGB4-208ENST00000582629 KRTAP4-11Q9BYQ6 195 aa4.42□□□□□ -1.7
ITGB4-208ENST00000582629 KRTAP23-1A1A580 65 aa4.41□□□□□ -1.7
ITGB4-208ENST00000582629 KRTAP5-2Q701N4 177 aa4.39□□□□□ -1.71
ITGB4-208ENST00000582629 MT1AP04731 61 aa4.37□□□□□ -1.71
ITGB4-208ENST00000582629 KRTAP6-1Q3LI64 71 aa4.34□□□□□ -1.71
ITGB4-208ENST00000582629 KRTAP5-8O75690 187 aa4.28□□□□□ -1.72
ITGB4-208ENST00000582629 KRTAP9-4Q9BYQ2 154 aa4.24□□□□□ -1.73
ITGB4-208ENST00000582629 PMAIP1Q13794 54 aa4.2□□□□□ -1.74
ITGB4-208ENST00000582629 MUC5ACP98088 5654 aa4.19□□□□□ -1.74
ITGB4-208ENST00000582629 KRTAP6-2Q3LI66 62 aa4.19□□□□□ -1.74
ITGB4-208ENST00000582629 AHNAKQ09666 5890 aaKnown RBP4.19□□□□□ -1.74
ITGB4-208ENST00000582629 MUC5BQ9HC84 5762 aaPredicted RBP4.17□□□□□ -1.74
ITGB4-208ENST00000582629 KRTAP9-6A8MVA2 160 aa4.16□□□□□ -1.74
ITGB4-208ENST00000582629 KRTAP9-9Q9BYP9 154 aa4.1□□□□□ -1.75
ITGB4-208ENST00000582629 PRO0628Q9UI54 55 aa4.08□□□□□ -1.76
ITGB4-208ENST00000582629 PRAC1Q96KF2 57 aa4.06□□□□□ -1.76
ITGB4-208ENST00000582629 OBSCNQ5VST9 7968 aa4.05□□□□□ -1.76
ITGB4-208ENST00000582629 MT3P25713 68 aa4.01□□□□□ -1.77
ITGB4-208ENST00000582629 KRTAP5-1Q6L8H4 278 aa3.97□□□□□ -1.77
ITGB4-208ENST00000582629 KTN1-AS1Q86SY8 53 aa3.84□□□□□ -1.79
ITGB4-208ENST00000582629 LCE1EQ5T753 118 aa3.74□□□□□ -1.81
ITGB4-208ENST00000582629 SVIPQ8NHG7 77 aa3.67□□□□□ -1.82
ITGB4-208ENST00000582629 KRTAP4-2Q9BYR5 136 aa3.54□□□□□ -1.84
ITGB4-208ENST00000582629 LCE1BQ5T7P3 118 aa3.52□□□□□ -1.85
ITGB4-208ENST00000582629 LCE1CQ5T751 118 aa3.46□□□□□ -1.86
ITGB4-208ENST00000582629 KRTAP4-12Q9BQ66 201 aa3.28□□□□□ -1.88
ITGB4-208ENST00000582629 LUZP6Q538Z0 58 aa3.25□□□□□ -1.89
ITGB4-208ENST00000582629 KRTAP5-11Q6L8G4 156 aa3.16□□□□□ -1.9
ITGB4-208ENST00000582629 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
ITGB4-208ENST00000582629 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.14□□□□□ -1.91
ITGB4-208ENST00000582629 LCE3DQ9BYE3 92 aa3.14□□□□□ -1.91
ITGB4-208ENST00000582629 NDUFAF8A1L188 74 aa2.94□□□□□ -1.94
ITGB4-208ENST00000582629 PHGR1C9JFL3 82 aa2.92□□□□□ -1.94
ITGB4-208ENST00000582629 LCE3EQ5T5B0 92 aa2.92□□□□□ -1.94
ITGB4-208ENST00000582629 KRTAP21-2Q3LI59 83 aa2.86□□□□□ -1.95
ITGB4-208ENST00000582629 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
ITGB4-208ENST00000582629 MUC19Q7Z5P9 8384 aa2.53□□□□□ -2
ITGB4-208ENST00000582629 A0A0A0MQY5 61 aa2.36□□□□□ -2.03
ITGB4-208ENST00000582629 PRM1P04553 51 aa2.36□□□□□ -2.03
ITGB4-208ENST00000582629 INE1O15225 51 aa2.32□□□□□ -2.04
ITGB4-208ENST00000582629 KRTAP21-1Q3LI58 79 aa2.23□□□□□ -2.05
ITGB4-208ENST00000582629 H3BS24 57 aa2.19□□□□□ -2.06
ITGB4-208ENST00000582629 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 11.1 ms