RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 K7ERS5 55 aa6□□□□□ -1.45
RNF43-206ENST00000582293 LCE5AQ5TCM9 118 aa5.97□□□□□ -1.45
RNF43-206ENST00000582293 KRTAP19-3Q7Z4W3 81 aa5.97□□□□□ -1.45
RNF43-206ENST00000582293 KRTAP25-1Q3LHN0 102 aa5.91□□□□□ -1.46
RNF43-206ENST00000582293 PMAIP1Q13794 54 aa5.9□□□□□ -1.46
RNF43-206ENST00000582293 MT1LQ93083 61 aa5.87□□□□□ -1.47
RNF43-206ENST00000582293 LCE3BQ5TA77 95 aa5.86□□□□□ -1.47
RNF43-206ENST00000582293 MT1GP13640 62 aa5.84□□□□□ -1.47
RNF43-206ENST00000582293 KRTAP2-2Q9BYT5 123 aa5.84□□□□□ -1.47
RNF43-206ENST00000582293 KRTAP2-1Q9BYU5 128 aa5.84□□□□□ -1.47
RNF43-206ENST00000582293 KRTAP12-3P60328 96 aa5.81□□□□□ -1.48
RNF43-206ENST00000582293 KTN1-AS1Q86SY8 53 aa5.81□□□□□ -1.48
RNF43-206ENST00000582293 DSTQ03001 7570 aaKnown RBP5.8□□□□□ -1.48
RNF43-206ENST00000582293 MT1MQ8N339 61 aa5.78□□□□□ -1.48
RNF43-206ENST00000582293 ROMO1P60602 79 aa5.74□□□□□ -1.49
RNF43-206ENST00000582293 KRTAP23-1A1A580 65 aa5.72□□□□□ -1.49
RNF43-206ENST00000582293 PP632Q6XCG6 107 aa5.72□□□□□ -1.49
RNF43-206ENST00000582293 KRTAP4-3Q9BYR4 195 aa5.68□□□□□ -1.5
RNF43-206ENST00000582293 KRTAP4-7Q9BYR0 210 aa5.65□□□□□ -1.5
RNF43-206ENST00000582293 GPR98Q8WXG9 6306 aa5.6□□□□□ -1.51
RNF43-206ENST00000582293 KRTAP15-1Q3LI76 137 aa5.52□□□□□ -1.53
RNF43-206ENST00000582293 KRTAP19-4Q3LI73 84 aa5.44□□□□□ -1.54
RNF43-206ENST00000582293 KRTAP4-9Q9BYQ8 210 aa5.41□□□□□ -1.54
RNF43-206ENST00000582293 LCE3CQ5T5A8 94 aa5.39□□□□□ -1.55
RNF43-206ENST00000582293 KRTAP5-4Q6L8H1 288 aa5.37□□□□□ -1.55
RNF43-206ENST00000582293 LCE4AQ5TA78 99 aa5.35□□□□□ -1.55
RNF43-206ENST00000582293 PRAC1Q96KF2 57 aa5.34□□□□□ -1.55
RNF43-206ENST00000582293 LOC100996750A0A140TA64 210 aa5.32□□□□□ -1.56
RNF43-206ENST00000582293 LCE1DQ5T752 114 aa5.32□□□□□ -1.56
RNF43-206ENST00000582293 KRTAP5-5Q701N2 237 aaPredicted RBP5.32□□□□□ -1.56
RNF43-206ENST00000582293 MT4P47944 62 aa5.27□□□□□ -1.57
RNF43-206ENST00000582293 HMCN1Q96RW7 5635 aa5.23□□□□□ -1.57
RNF43-206ENST00000582293 KRTAP4-6Q9BYQ5 205 aa5.2□□□□□ -1.58
RNF43-206ENST00000582293 KRTAP9-6A8MVA2 160 aa5.16□□□□□ -1.58
RNF43-206ENST00000582293 SYNE1Q8NF91 8797 aaKnown RBP5.07□□□□□ -1.6
RNF43-206ENST00000582293 KRTAP20-2Q3LI61 65 aa5.03□□□□□ -1.6
RNF43-206ENST00000582293 SPRR5A0A1B0GTR4 108 aa5.01□□□□□ -1.61
RNF43-206ENST00000582293 MT1AP04731 61 aa4.99□□□□□ -1.61
RNF43-206ENST00000582293 KRTAP12-4P60329 112 aa4.99□□□□□ -1.61
RNF43-206ENST00000582293 KRTAP6-1Q3LI64 71 aa4.97□□□□□ -1.61
RNF43-206ENST00000582293 AHNAK2Q8IVF2 5795 aa4.93□□□□□ -1.62
RNF43-206ENST00000582293 KRTAP5-3Q6L8H2 238 aa4.9□□□□□ -1.63
RNF43-206ENST00000582293 KRTAP5-10Q6L8G5 202 aa4.81□□□□□ -1.64
RNF43-206ENST00000582293 KRTAP9-4Q9BYQ2 154 aa4.8□□□□□ -1.64
RNF43-206ENST00000582293 KRTAP5-2Q701N4 177 aa4.76□□□□□ -1.65
RNF43-206ENST00000582293 KRTAP5-7Q6L8G8 165 aa4.68□□□□□ -1.66
RNF43-206ENST00000582293 KRTAP6-2Q3LI66 62 aa4.67□□□□□ -1.66
RNF43-206ENST00000582293 H3BS24 57 aa4.55□□□□□ -1.68
RNF43-206ENST00000582293 MT3P25713 68 aa4.52□□□□□ -1.69
RNF43-206ENST00000582293 KRTAP4-11Q9BYQ6 195 aa4.51□□□□□ -1.69
RNF43-206ENST00000582293 NDUFAF8A1L188 74 aa4.48□□□□□ -1.69
RNF43-206ENST00000582293 OBSCNQ5VST9 7968 aa4.44□□□□□ -1.7
RNF43-206ENST00000582293 LUZP6Q538Z0 58 aa4.42□□□□□ -1.7
RNF43-206ENST00000582293 KRTAP5-8O75690 187 aa4.38□□□□□ -1.71
RNF43-206ENST00000582293 AHNAKQ09666 5890 aaKnown RBP4.3□□□□□ -1.72
RNF43-206ENST00000582293 KRTAP5-1Q6L8H4 278 aa4.23□□□□□ -1.73
RNF43-206ENST00000582293 MUC5ACP98088 5654 aa4.18□□□□□ -1.74
RNF43-206ENST00000582293 A0A0A0MQY5 61 aa4.15□□□□□ -1.75
RNF43-206ENST00000582293 MUC5BQ9HC84 5762 aaPredicted RBP4.15□□□□□ -1.75
RNF43-206ENST00000582293 LCE1EQ5T753 118 aa4.09□□□□□ -1.75
RNF43-206ENST00000582293 KRTAP9-9Q9BYP9 154 aa4.02□□□□□ -1.77
RNF43-206ENST00000582293 LCE3DQ9BYE3 92 aa3.92□□□□□ -1.78
RNF43-206ENST00000582293 INE1O15225 51 aa3.91□□□□□ -1.78
RNF43-206ENST00000582293 KRTAP4-2Q9BYR5 136 aa3.9□□□□□ -1.79
RNF43-206ENST00000582293 LCE1BQ5T7P3 118 aa3.82□□□□□ -1.8
RNF43-206ENST00000582293 LCE1CQ5T751 118 aa3.81□□□□□ -1.8
RNF43-206ENST00000582293 LCE3EQ5T5B0 92 aa3.73□□□□□ -1.81
RNF43-206ENST00000582293 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.52□□□□□ -1.85
RNF43-206ENST00000582293 KRTAP5-11Q6L8G4 156 aa3.43□□□□□ -1.86
RNF43-206ENST00000582293 KRTAP4-12Q9BQ66 201 aa3.4□□□□□ -1.87
RNF43-206ENST00000582293 KRTAP21-2Q3LI59 83 aa3.28□□□□□ -1.88
RNF43-206ENST00000582293 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
RNF43-206ENST00000582293 PRM1P04553 51 aa2.98□□□□□ -1.93
RNF43-206ENST00000582293 PHGR1C9JFL3 82 aa2.96□□□□□ -1.94
RNF43-206ENST00000582293 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.94
RNF43-206ENST00000582293 MUC19Q7Z5P9 8384 aa2.71□□□□□ -1.98
RNF43-206ENST00000582293 KRTAP21-1Q3LI58 79 aa2.15□□□□□ -2.07
RNF43-206ENST00000582293 MUC16Q8WXI7 14507 aa1.88□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 99.2 ms