RNA–Protein interactions for RNA: ENST00000582050.1

EIF4A1-222, Transcript of eukaryotic translation initiation factor 4A1, human

TSL 5

Gene EIF4A1, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF4A1-222	ENST00000582050	LCE1A	Q5T7P2	110 aa		6.53	□□□□□ -1.36
EIF4A1-222	ENST00000582050	MDN1	Q9NU22	5596 aa		6.53	□□□□□ -1.36
EIF4A1-222	ENST00000582050	NEB	P20929	6669 aa		6.52	□□□□□ -1.37
EIF4A1-222	ENST00000582050	SPRR2E	P22531	72 aa		6.52	□□□□□ -1.37
EIF4A1-222	ENST00000582050	SPRR2B	P35325	72 aa		6.52	□□□□□ -1.37
EIF4A1-222	ENST00000582050	SPRR2A	P35326	72 aa		6.52	□□□□□ -1.37
EIF4A1-222	ENST00000582050	KRTAP9-9	Q9BYP9	154 aa		6.49	□□□□□ -1.37
EIF4A1-222	ENST00000582050	KRTAP9-4	Q9BYQ2	154 aa		6.49	□□□□□ -1.37
EIF4A1-222	ENST00000582050	KRTAP19-3	Q7Z4W3	81 aa		6.44	□□□□□ -1.38
EIF4A1-222	ENST00000582050	MT1L	Q93083	61 aa		6.41	□□□□□ -1.38
EIF4A1-222	ENST00000582050	MT1G	P13640	62 aa		6.39	□□□□□ -1.39
EIF4A1-222	ENST00000582050	LCE5A	Q5TCM9	118 aa		6.38	□□□□□ -1.39
EIF4A1-222	ENST00000582050	KTN1-AS1	Q86SY8	53 aa		6.37	□□□□□ -1.39
EIF4A1-222	ENST00000582050	KRTAP15-1	Q3LI76	137 aa		6.35	□□□□□ -1.39
EIF4A1-222	ENST00000582050	KRTAP19-4	Q3LI73	84 aa		6.33	□□□□□ -1.4
EIF4A1-222	ENST00000582050	PRAC1	Q96KF2	57 aa		6.33	□□□□□ -1.4
EIF4A1-222	ENST00000582050	SPRR2D	P22532	72 aa		6.31	□□□□□ -1.4
EIF4A1-222	ENST00000582050	MT1M	Q8N339	61 aa		6.25	□□□□□ -1.41
EIF4A1-222	ENST00000582050	LCE1D	Q5T752	114 aa		6.18	□□□□□ -1.42
EIF4A1-222	ENST00000582050	KRTAP2-3	P0C7H8	128 aa		6.14	□□□□□ -1.43
EIF4A1-222	ENST00000582050	KRTAP2-4	Q9BYR9	128 aa		6.14	□□□□□ -1.43
EIF4A1-222	ENST00000582050	KRTAP20-1	Q3LI63	56 aa		6.12	□□□□□ -1.43
EIF4A1-222	ENST00000582050	KRTAP4-7	Q9BYR0	210 aa		6.12	□□□□□ -1.43
EIF4A1-222	ENST00000582050	LCE3C	Q5T5A8	94 aa		6.11	□□□□□ -1.43
EIF4A1-222	ENST00000582050		H3BS24	57 aa		6.09	□□□□□ -1.43
EIF4A1-222	ENST00000582050	LCE4A	Q5TA78	99 aa		6.08	□□□□□ -1.44
EIF4A1-222	ENST00000582050	DST	Q03001	7570 aa	Known RBP	6.06	□□□□□ -1.44
EIF4A1-222	ENST00000582050	KRTAP4-3	Q9BYR4	195 aa		6.03	□□□□□ -1.44
EIF4A1-222	ENST00000582050	SVIP	Q8NHG7	77 aa		6	□□□□□ -1.45
EIF4A1-222	ENST00000582050	KRTAP4-9	Q9BYQ8	210 aa		6	□□□□□ -1.45
EIF4A1-222	ENST00000582050	KRTAP2-2	Q9BYT5	123 aa		5.99	□□□□□ -1.45
EIF4A1-222	ENST00000582050	KRTAP2-1	Q9BYU5	128 aa		5.99	□□□□□ -1.45
EIF4A1-222	ENST00000582050	KRTAP4-2	Q9BYR5	136 aa		5.86	□□□□□ -1.47
EIF4A1-222	ENST00000582050	KRTAP4-11	Q9BYQ6	195 aa		5.79	□□□□□ -1.48
EIF4A1-222	ENST00000582050	KRTAP9-6	A8MVA2	160 aa		5.72	□□□□□ -1.49
EIF4A1-222	ENST00000582050	SPRR5	A0A1B0GTR4	108 aa		5.69	□□□□□ -1.5
EIF4A1-222	ENST00000582050	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.68	□□□□□ -1.5
EIF4A1-222	ENST00000582050	KRTAP5-4	Q6L8H1	288 aa		5.63	□□□□□ -1.51
EIF4A1-222	ENST00000582050	SYNE1	Q8NF91	8797 aa	Known RBP	5.5	□□□□□ -1.53
EIF4A1-222	ENST00000582050	MT1A	P04731	61 aa		5.48	□□□□□ -1.53
EIF4A1-222	ENST00000582050	MT4	P47944	62 aa		5.44	□□□□□ -1.54
EIF4A1-222	ENST00000582050	KRTAP12-4	P60329	112 aa		5.42	□□□□□ -1.54
EIF4A1-222	ENST00000582050	KRTAP6-1	Q3LI64	71 aa		5.38	□□□□□ -1.55
EIF4A1-222	ENST00000582050	HMCN1	Q96RW7	5635 aa		5.35	□□□□□ -1.55
EIF4A1-222	ENST00000582050	LUZP6	Q538Z0	58 aa		5.33	□□□□□ -1.56
EIF4A1-222	ENST00000582050	KRTAP20-2	Q3LI61	65 aa		5.26	□□□□□ -1.57
EIF4A1-222	ENST00000582050	KRTAP5-3	Q6L8H2	238 aa		5.17	□□□□□ -1.58
EIF4A1-222	ENST00000582050	KRTAP6-2	Q3LI66	62 aa		5.04	□□□□□ -1.6
EIF4A1-222	ENST00000582050	KRTAP5-2	Q701N4	177 aa		5.03	□□□□□ -1.6
EIF4A1-222	ENST00000582050	MT3	P25713	68 aa		5	□□□□□ -1.61
EIF4A1-222	ENST00000582050	AHNAK2	Q8IVF2	5795 aa		4.91	□□□□□ -1.62
EIF4A1-222	ENST00000582050	NDUFAF8	A1L188	74 aa		4.83	□□□□□ -1.64
EIF4A1-222	ENST00000582050	GPR98	Q8WXG9	6306 aa		4.8	□□□□□ -1.64
EIF4A1-222	ENST00000582050	KRTAP5-10	Q6L8G5	202 aa		4.76	□□□□□ -1.65
EIF4A1-222	ENST00000582050	OBSCN	Q5VST9	7968 aa		4.66	□□□□□ -1.66
EIF4A1-222	ENST00000582050	LCE3D	Q9BYE3	92 aa		4.54	□□□□□ -1.68
EIF4A1-222	ENST00000582050	KRTAP5-7	Q6L8G8	165 aa		4.51	□□□□□ -1.69
EIF4A1-222	ENST00000582050	KRTAP5-8	O75690	187 aa		4.5	□□□□□ -1.69
EIF4A1-222	ENST00000582050	LCE1E	Q5T753	118 aa		4.47	□□□□□ -1.69
EIF4A1-222	ENST00000582050	KRTAP5-1	Q6L8H4	278 aa		4.39	□□□□□ -1.71
EIF4A1-222	ENST00000582050	LCE3E	Q5T5B0	92 aa		4.37	□□□□□ -1.71
EIF4A1-222	ENST00000582050	MUC5AC	P98088	5654 aa		4.25	□□□□□ -1.73
EIF4A1-222	ENST00000582050		A0A0A0MQY5	61 aa		4.2	□□□□□ -1.74
EIF4A1-222	ENST00000582050	LCE1C	Q5T751	118 aa		4.14	□□□□□ -1.75
EIF4A1-222	ENST00000582050	LCE1B	Q5T7P3	118 aa		4.14	□□□□□ -1.75
EIF4A1-222	ENST00000582050	INE1	O15225	51 aa		4.05	□□□□□ -1.76
EIF4A1-222	ENST00000582050	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.98	□□□□□ -1.77
EIF4A1-222	ENST00000582050	KRTAP5-11	Q6L8G4	156 aa		3.92	□□□□□ -1.78
EIF4A1-222	ENST00000582050	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.89	□□□□□ -1.79
EIF4A1-222	ENST00000582050	AHNAK	Q09666	5890 aa	Known RBP	3.87	□□□□□ -1.79
EIF4A1-222	ENST00000582050	PRM1	P04553	51 aa		3.59	□□□□□ -1.83
EIF4A1-222	ENST00000582050	KRTAP21-2	Q3LI59	83 aa		3.55	□□□□□ -1.84
EIF4A1-222	ENST00000582050	LCE1F	Q5T754	118 aa		3.48	□□□□□ -1.85
EIF4A1-222	ENST00000582050	KRTAP4-4	Q9BYR3	166 aa		3.26	□□□□□ -1.89
EIF4A1-222	ENST00000582050	PHGR1	C9JFL3	82 aa		3.16	□□□□□ -1.9
EIF4A1-222	ENST00000582050	MUC19	Q7Z5P9	8384 aa		2.86	□□□□□ -1.95
EIF4A1-222	ENST00000582050	KRTAP21-1	Q3LI58	79 aa		2.13	□□□□□ -2.07
EIF4A1-222	ENST00000582050	MUC16	Q8WXI7	14507 aa		2.12	□□□□□ -2.07

Retrieved 78 of 20,778 RNA–protein pairs in 127 ms