RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 PMAIP1Q13794 54 aa3.92□□□□□ -1.78
TOP3A-211ENST00000581536 KRTAP20-1Q3LI63 56 aa3.92□□□□□ -1.78
TOP3A-211ENST00000581536 KRTAP8-1Q8IUC2 63 aa3.92□□□□□ -1.78
TOP3A-211ENST00000581536 CDC42SE1Q9NRR8 79 aa3.91□□□□□ -1.78
TOP3A-211ENST00000581536 SPRR2EP22531 72 aa3.89□□□□□ -1.79
TOP3A-211ENST00000581536 SPRR2BP35325 72 aa3.89□□□□□ -1.79
TOP3A-211ENST00000581536 SPRR2AP35326 72 aa3.89□□□□□ -1.79
TOP3A-211ENST00000581536 KRTAP13-4Q3LI77 160 aa3.89□□□□□ -1.79
TOP3A-211ENST00000581536 LCE3CQ5T5A8 94 aa3.87□□□□□ -1.79
TOP3A-211ENST00000581536 KTN1-AS1Q86SY8 53 aa3.86□□□□□ -1.79
TOP3A-211ENST00000581536 KRTAP2-3P0C7H8 128 aa3.84□□□□□ -1.79
TOP3A-211ENST00000581536 KRTAP2-4Q9BYR9 128 aa3.84□□□□□ -1.79
TOP3A-211ENST00000581536 KRTAP9-6A8MVA2 160 aa3.83□□□□□ -1.8
TOP3A-211ENST00000581536 SEC61GP60059 68 aa3.82□□□□□ -1.8
TOP3A-211ENST00000581536 A0A1B0GU69 56 aa3.8□□□□□ -1.8
TOP3A-211ENST00000581536 A8MU10 97 aa3.8□□□□□ -1.8
TOP3A-211ENST00000581536 SPATA8Q6RVD6 105 aa3.76□□□□□ -1.81
TOP3A-211ENST00000581536 A0A0D9SG42 100 aa3.75□□□□□ -1.81
TOP3A-211ENST00000581536 UQCR11O14957 56 aa3.75□□□□□ -1.81
TOP3A-211ENST00000581536 SPRR2DP22532 72 aa3.75□□□□□ -1.81
TOP3A-211ENST00000581536 CAMK2N1Q7Z7J9 78 aa3.74□□□□□ -1.81
TOP3A-211ENST00000581536 MIR22HGQ0VDD5 57 aa3.72□□□□□ -1.81
TOP3A-211ENST00000581536 KRTAP2-1Q9BYU5 128 aa3.72□□□□□ -1.81
TOP3A-211ENST00000581536 A0A1B0GU33 70 aa3.71□□□□□ -1.82
TOP3A-211ENST00000581536 SPINT4Q6UDR6 99 aa3.69□□□□□ -1.82
TOP3A-211ENST00000581536 KRTAP12-1P59990 96 aa3.67□□□□□ -1.82
TOP3A-211ENST00000581536 KRTAP19-7Q3SYF9 63 aa3.65□□□□□ -1.83
TOP3A-211ENST00000581536 MT1EP04732 61 aa3.6□□□□□ -1.83
TOP3A-211ENST00000581536 DSTQ03001 7570 aaKnown RBP3.59□□□□□ -1.83
TOP3A-211ENST00000581536 K7ERS5 55 aa3.57□□□□□ -1.84
TOP3A-211ENST00000581536 KRTAP19-5Q3LI72 72 aa3.57□□□□□ -1.84
TOP3A-211ENST00000581536 KRTAP5-1Q6L8H4 278 aa3.56□□□□□ -1.84
TOP3A-211ENST00000581536 KRTAP19-3Q7Z4W3 81 aa3.56□□□□□ -1.84
TOP3A-211ENST00000581536 C10orf95Q9H7T3 257 aa3.53□□□□□ -1.84
TOP3A-211ENST00000581536 LCE3EQ5T5B0 92 aa3.52□□□□□ -1.85
TOP3A-211ENST00000581536 MT1GP13640 62 aa3.48□□□□□ -1.85
TOP3A-211ENST00000581536 LCE3AQ5TA76 89 aa3.48□□□□□ -1.85
TOP3A-211ENST00000581536 KRTAP25-1Q3LHN0 102 aa3.46□□□□□ -1.86
TOP3A-211ENST00000581536 TNP1P09430 55 aa3.45□□□□□ -1.86
TOP3A-211ENST00000581536 MT1MQ8N339 61 aa3.44□□□□□ -1.86
TOP3A-211ENST00000581536 MT1LQ93083 61 aa3.44□□□□□ -1.86
TOP3A-211ENST00000581536 KRTAP4-3Q9BYR4 195 aa3.43□□□□□ -1.86
TOP3A-211ENST00000581536 ROMO1P60602 79 aa3.42□□□□□ -1.86
TOP3A-211ENST00000581536 GPR98Q8WXG9 6306 aa3.41□□□□□ -1.86
TOP3A-211ENST00000581536 PP632Q6XCG6 107 aa3.4□□□□□ -1.87
TOP3A-211ENST00000581536 KRTAP5-4Q6L8H1 288 aa3.39□□□□□ -1.87
TOP3A-211ENST00000581536 KRTAP4-4Q9BYR3 166 aa3.37□□□□□ -1.87
TOP3A-211ENST00000581536 MT4P47944 62 aa3.32□□□□□ -1.88
TOP3A-211ENST00000581536 KRTAP12-3P60328 96 aa3.32□□□□□ -1.88
TOP3A-211ENST00000581536 HMCN1Q96RW7 5635 aa3.28□□□□□ -1.88
TOP3A-211ENST00000581536 AHNAK2Q8IVF2 5795 aa3.2□□□□□ -1.9
TOP3A-211ENST00000581536 KRTAP5-5Q701N2 237 aaPredicted RBP3.14□□□□□ -1.91
TOP3A-211ENST00000581536 OBSCNQ5VST9 7968 aa3.09□□□□□ -1.91
TOP3A-211ENST00000581536 SYNE1Q8NF91 8797 aaKnown RBP3.08□□□□□ -1.92
TOP3A-211ENST00000581536 KRTAP20-2Q3LI61 65 aa3.08□□□□□ -1.92
TOP3A-211ENST00000581536 KRTAP5-10Q6L8G5 202 aa3.08□□□□□ -1.92
TOP3A-211ENST00000581536 SPRR5A0A1B0GTR4 108 aa3.03□□□□□ -1.92
TOP3A-211ENST00000581536 KRTAP12-4P60329 112 aa3.03□□□□□ -1.92
TOP3A-211ENST00000581536 KRTAP6-1Q3LI64 71 aa2.95□□□□□ -1.94
TOP3A-211ENST00000581536 LUZP6Q538Z0 58 aa2.95□□□□□ -1.94
TOP3A-211ENST00000581536 KRTAP5-7Q6L8G8 165 aa2.94□□□□□ -1.94
TOP3A-211ENST00000581536 MT1AP04731 61 aa2.91□□□□□ -1.94
TOP3A-211ENST00000581536 LCE3DQ9BYE3 92 aa2.88□□□□□ -1.95
TOP3A-211ENST00000581536 LCE1CQ5T751 118 aa2.85□□□□□ -1.95
TOP3A-211ENST00000581536 LCE1BQ5T7P3 118 aa2.85□□□□□ -1.95
TOP3A-211ENST00000581536 KRTAP5-2Q701N4 177 aa2.85□□□□□ -1.95
TOP3A-211ENST00000581536 KRTAP6-2Q3LI66 62 aa2.8□□□□□ -1.96
TOP3A-211ENST00000581536 KRTAP5-8O75690 187 aa2.73□□□□□ -1.97
TOP3A-211ENST00000581536 AHNAKQ09666 5890 aaKnown RBP2.63□□□□□ -1.99
TOP3A-211ENST00000581536 MUC5BQ9HC84 5762 aaPredicted RBP2.59□□□□□ -1.99
TOP3A-211ENST00000581536 INE1O15225 51 aa2.58□□□□□ -2
TOP3A-211ENST00000581536 MUC5ACP98088 5654 aa2.55□□□□□ -2
TOP3A-211ENST00000581536 MUC19Q7Z5P9 8384 aa2.25□□□□□ -2.05
TOP3A-211ENST00000581536 KRTAP21-2Q3LI59 83 aa2□□□□□ -2.09
TOP3A-211ENST00000581536 PHGR1C9JFL3 82 aa1.79□□□□□ -2.12
TOP3A-211ENST00000581536 PRM1P04553 51 aa1.79□□□□□ -2.12
TOP3A-211ENST00000581536 KRTAP21-1Q3LI58 79 aa1.32□□□□□ -2.2
TOP3A-211ENST00000581536 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 98.7 ms