RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 KRTAP19-3Q7Z4W3 81 aa5.46□□□□□ -1.54
MKS1-210ENST00000581180 LCE5AQ5TCM9 118 aa5.44□□□□□ -1.54
MKS1-210ENST00000581180 SPRR2DP22532 72 aa5.43□□□□□ -1.54
MKS1-210ENST00000581180 KRTAP12-3P60328 96 aa5.43□□□□□ -1.54
MKS1-210ENST00000581180 MT1LQ93083 61 aa5.41□□□□□ -1.54
MKS1-210ENST00000581180 KRTAP20-1Q3LI63 56 aa5.39□□□□□ -1.55
MKS1-210ENST00000581180 MT1GP13640 62 aa5.37□□□□□ -1.55
MKS1-210ENST00000581180 KRTAP2-3P0C7H8 128 aa5.36□□□□□ -1.55
MKS1-210ENST00000581180 KRTAP2-4Q9BYR9 128 aa5.36□□□□□ -1.55
MKS1-210ENST00000581180 PP632Q6XCG6 107 aa5.32□□□□□ -1.56
MKS1-210ENST00000581180 MT1MQ8N339 61 aa5.29□□□□□ -1.56
MKS1-210ENST00000581180 LCE3BQ5TA77 95 aa5.26□□□□□ -1.57
MKS1-210ENST00000581180 KRTAP2-2Q9BYT5 123 aa5.22□□□□□ -1.57
MKS1-210ENST00000581180 KRTAP2-1Q9BYU5 128 aa5.22□□□□□ -1.57
MKS1-210ENST00000581180 PMAIP1Q13794 54 aa5.2□□□□□ -1.58
MKS1-210ENST00000581180 KRTAP15-1Q3LI76 137 aa5.2□□□□□ -1.58
MKS1-210ENST00000581180 A0A0A0MQY5 61 aa5.18□□□□□ -1.58
MKS1-210ENST00000581180 DSTQ03001 7570 aaKnown RBP5.17□□□□□ -1.58
MKS1-210ENST00000581180 KRTAP19-4Q3LI73 84 aa5.16□□□□□ -1.58
MKS1-210ENST00000581180 KRTAP4-7Q9BYR0 210 aa5.16□□□□□ -1.58
MKS1-210ENST00000581180 KRTAP4-3Q9BYR4 195 aa5.16□□□□□ -1.58
MKS1-210ENST00000581180 PRO0628Q9UI54 55 aa5.15□□□□□ -1.59
MKS1-210ENST00000581180 LCE3CQ5T5A8 94 aa5.04□□□□□ -1.6
MKS1-210ENST00000581180 PRAC1Q96KF2 57 aa4.95□□□□□ -1.62
MKS1-210ENST00000581180 LOC100996750A0A140TA64 210 aa4.87□□□□□ -1.63
MKS1-210ENST00000581180 KRTAP5-4Q6L8H1 288 aa4.85□□□□□ -1.63
MKS1-210ENST00000581180 LCE4AQ5TA78 99 aa4.84□□□□□ -1.63
MKS1-210ENST00000581180 KRTAP5-5Q701N2 237 aaPredicted RBP4.84□□□□□ -1.63
MKS1-210ENST00000581180 KTN1-AS1Q86SY8 53 aa4.84□□□□□ -1.63
MKS1-210ENST00000581180 KRTAP4-6Q9BYQ5 205 aa4.8□□□□□ -1.64
MKS1-210ENST00000581180 KRTAP4-9Q9BYQ8 210 aa4.8□□□□□ -1.64
MKS1-210ENST00000581180 KRTAP9-6A8MVA2 160 aa4.78□□□□□ -1.64
MKS1-210ENST00000581180 LCE1DQ5T752 114 aa4.74□□□□□ -1.65
MKS1-210ENST00000581180 MT4P47944 62 aa4.72□□□□□ -1.65
MKS1-210ENST00000581180 HMCN1Q96RW7 5635 aa4.63□□□□□ -1.67
MKS1-210ENST00000581180 MT1AP04731 61 aa4.6□□□□□ -1.67
MKS1-210ENST00000581180 SYNE1Q8NF91 8797 aaKnown RBP4.59□□□□□ -1.67
MKS1-210ENST00000581180 GPR98Q8WXG9 6306 aa4.58□□□□□ -1.68
MKS1-210ENST00000581180 KRTAP12-4P60329 112 aa4.57□□□□□ -1.68
MKS1-210ENST00000581180 SPRR5A0A1B0GTR4 108 aa4.56□□□□□ -1.68
MKS1-210ENST00000581180 KRTAP6-1Q3LI64 71 aa4.56□□□□□ -1.68
MKS1-210ENST00000581180 KRTAP20-2Q3LI61 65 aa4.53□□□□□ -1.68
MKS1-210ENST00000581180 KRTAP5-3Q6L8H2 238 aa4.41□□□□□ -1.7
MKS1-210ENST00000581180 KRTAP9-4Q9BYQ2 154 aa4.41□□□□□ -1.7
MKS1-210ENST00000581180 AHNAK2Q8IVF2 5795 aa4.36□□□□□ -1.71
MKS1-210ENST00000581180 KRTAP5-2Q701N4 177 aa4.32□□□□□ -1.72
MKS1-210ENST00000581180 KRTAP6-2Q3LI66 62 aa4.27□□□□□ -1.73
MKS1-210ENST00000581180 KRTAP5-10Q6L8G5 202 aa4.23□□□□□ -1.73
MKS1-210ENST00000581180 MT3P25713 68 aa4.18□□□□□ -1.74
MKS1-210ENST00000581180 LUZP6Q538Z0 58 aa4.08□□□□□ -1.76
MKS1-210ENST00000581180 KRTAP4-12Q9BQ66 201 aa4.06□□□□□ -1.76
MKS1-210ENST00000581180 KRTAP4-11Q9BYQ6 195 aa4.05□□□□□ -1.76
MKS1-210ENST00000581180 KRTAP5-7Q6L8G8 165 aa4.01□□□□□ -1.77
MKS1-210ENST00000581180 KRTAP9-9Q9BYP9 154 aa3.96□□□□□ -1.78
MKS1-210ENST00000581180 KRTAP5-8O75690 187 aa3.92□□□□□ -1.78
MKS1-210ENST00000581180 OBSCNQ5VST9 7968 aa3.9□□□□□ -1.78
MKS1-210ENST00000581180 KRTAP5-1Q6L8H4 278 aa3.81□□□□□ -1.8
MKS1-210ENST00000581180 LCE1EQ5T753 118 aa3.76□□□□□ -1.81
MKS1-210ENST00000581180 NDUFAF8A1L188 74 aa3.74□□□□□ -1.81
MKS1-210ENST00000581180 KRTAP4-2Q9BYR5 136 aa3.72□□□□□ -1.81
MKS1-210ENST00000581180 LCE3DQ9BYE3 92 aa3.69□□□□□ -1.82
MKS1-210ENST00000581180 MUC5ACP98088 5654 aa3.69□□□□□ -1.82
MKS1-210ENST00000581180 LCE3EQ5T5B0 92 aa3.55□□□□□ -1.84
MKS1-210ENST00000581180 AHNAKQ09666 5890 aaKnown RBP3.53□□□□□ -1.84
MKS1-210ENST00000581180 MUC5BQ9HC84 5762 aaPredicted RBP3.52□□□□□ -1.85
MKS1-210ENST00000581180 LCE1CQ5T751 118 aa3.49□□□□□ -1.85
MKS1-210ENST00000581180 LCE1BQ5T7P3 118 aa3.49□□□□□ -1.85
MKS1-210ENST00000581180 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.25□□□□□ -1.89
MKS1-210ENST00000581180 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
MKS1-210ENST00000581180 KRTAP5-11Q6L8G4 156 aa3.14□□□□□ -1.91
MKS1-210ENST00000581180 KRTAP21-2Q3LI59 83 aa3.01□□□□□ -1.93
MKS1-210ENST00000581180 INE1O15225 51 aa2.99□□□□□ -1.93
MKS1-210ENST00000581180 PRM1P04553 51 aa2.86□□□□□ -1.95
MKS1-210ENST00000581180 PHGR1C9JFL3 82 aa2.69□□□□□ -1.98
MKS1-210ENST00000581180 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
MKS1-210ENST00000581180 MUC19Q7Z5P9 8384 aa2.39□□□□□ -2.03
MKS1-210ENST00000581180 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
MKS1-210ENST00000581180 MUC16Q8WXI7 14507 aa1.71□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 136.8 ms