RNA–Protein interactions for RNA: ENST00000581160.5

CDK5RAP3-220, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-220ENST00000581160 SPRR2AP35326 72 aa3.31□□□□□ -1.88
CDK5RAP3-220ENST00000581160 KRTAP20-1Q3LI63 56 aa3.3□□□□□ -1.88
CDK5RAP3-220ENST00000581160 MDN1Q9NU22 5596 aa3.28□□□□□ -1.88
CDK5RAP3-220ENST00000581160 KRTAP19-3Q7Z4W3 81 aa3.28□□□□□ -1.88
CDK5RAP3-220ENST00000581160 KTN1-AS1Q86SY8 53 aa3.27□□□□□ -1.89
CDK5RAP3-220ENST00000581160 MT1LQ93083 61 aa3.27□□□□□ -1.89
CDK5RAP3-220ENST00000581160 PRAC1Q96KF2 57 aa3.27□□□□□ -1.89
CDK5RAP3-220ENST00000581160 MT1GP13640 62 aa3.26□□□□□ -1.89
CDK5RAP3-220ENST00000581160 KRTAP15-1Q3LI76 137 aa3.25□□□□□ -1.89
CDK5RAP3-220ENST00000581160 LCE5AQ5TCM9 118 aa3.25□□□□□ -1.89
CDK5RAP3-220ENST00000581160 KRTAP19-4Q3LI73 84 aa3.23□□□□□ -1.89
CDK5RAP3-220ENST00000581160 SPRR2DP22532 72 aa3.19□□□□□ -1.9
CDK5RAP3-220ENST00000581160 MT1MQ8N339 61 aa3.19□□□□□ -1.9
CDK5RAP3-220ENST00000581160 KRTAP2-3P0C7H8 128 aa3.13□□□□□ -1.91
CDK5RAP3-220ENST00000581160 LCE3CQ5T5A8 94 aa3.13□□□□□ -1.91
CDK5RAP3-220ENST00000581160 KRTAP2-4Q9BYR9 128 aa3.13□□□□□ -1.91
CDK5RAP3-220ENST00000581160 KRTAP4-7Q9BYR0 210 aa3.12□□□□□ -1.91
CDK5RAP3-220ENST00000581160 LCE3BQ5TA77 95 aa3.09□□□□□ -1.91
CDK5RAP3-220ENST00000581160 KRTAP4-3Q9BYR4 195 aa3.09□□□□□ -1.91
CDK5RAP3-220ENST00000581160 DSTQ03001 7570 aaKnown RBP3.07□□□□□ -1.92
CDK5RAP3-220ENST00000581160 SVIPQ8NHG7 77 aa3.06□□□□□ -1.92
CDK5RAP3-220ENST00000581160 KRTAP2-2Q9BYT5 123 aa3.04□□□□□ -1.92
CDK5RAP3-220ENST00000581160 KRTAP2-1Q9BYU5 128 aa3.04□□□□□ -1.92
CDK5RAP3-220ENST00000581160 LOC100996750A0A140TA64 210 aa2.94□□□□□ -1.94
CDK5RAP3-220ENST00000581160 SPRR5A0A1B0GTR4 108 aa2.93□□□□□ -1.94
CDK5RAP3-220ENST00000581160 KRTAP9-6A8MVA2 160 aa2.93□□□□□ -1.94
CDK5RAP3-220ENST00000581160 KRTAP5-5Q701N2 237 aaPredicted RBP2.89□□□□□ -1.95
CDK5RAP3-220ENST00000581160 KRTAP5-4Q6L8H1 288 aa2.87□□□□□ -1.95
CDK5RAP3-220ENST00000581160 LCE4AQ5TA78 99 aa2.86□□□□□ -1.95
CDK5RAP3-220ENST00000581160 GPR98Q8WXG9 6306 aa2.85□□□□□ -1.95
CDK5RAP3-220ENST00000581160 MT1AP04731 61 aa2.79□□□□□ -1.96
CDK5RAP3-220ENST00000581160 KRTAP4-9Q9BYQ8 210 aa2.78□□□□□ -1.96
CDK5RAP3-220ENST00000581160 SYNE1Q8NF91 8797 aaKnown RBP2.78□□□□□ -1.96
CDK5RAP3-220ENST00000581160 MT4P47944 62 aa2.76□□□□□ -1.97
CDK5RAP3-220ENST00000581160 LCE1DQ5T752 114 aa2.76□□□□□ -1.97
CDK5RAP3-220ENST00000581160 KRTAP6-1Q3LI64 71 aa2.75□□□□□ -1.97
CDK5RAP3-220ENST00000581160 KRTAP12-4P60329 112 aa2.74□□□□□ -1.97
CDK5RAP3-220ENST00000581160 KRTAP4-6Q9BYQ5 205 aa2.73□□□□□ -1.97
CDK5RAP3-220ENST00000581160 LUZP6Q538Z0 58 aa2.71□□□□□ -1.98
CDK5RAP3-220ENST00000581160 HMCN1Q96RW7 5635 aa2.69□□□□□ -1.98
CDK5RAP3-220ENST00000581160 KRTAP9-4Q9BYQ2 154 aa2.69□□□□□ -1.98
CDK5RAP3-220ENST00000581160 KRTAP20-2Q3LI61 65 aa2.67□□□□□ -1.98
CDK5RAP3-220ENST00000581160 KRTAP5-3Q6L8H2 238 aa2.59□□□□□ -1.99
CDK5RAP3-220ENST00000581160 KRTAP6-2Q3LI66 62 aa2.57□□□□□ -2
CDK5RAP3-220ENST00000581160 KRTAP5-10Q6L8G5 202 aa2.56□□□□□ -2
CDK5RAP3-220ENST00000581160 KRTAP5-2Q701N4 177 aa2.56□□□□□ -2
CDK5RAP3-220ENST00000581160 MT3P25713 68 aa2.55□□□□□ -2
CDK5RAP3-220ENST00000581160 KRTAP5-7Q6L8G8 165 aa2.52□□□□□ -2.01
CDK5RAP3-220ENST00000581160 AHNAK2Q8IVF2 5795 aa2.49□□□□□ -2.01
CDK5RAP3-220ENST00000581160 NDUFAF8A1L188 74 aa2.49□□□□□ -2.01
CDK5RAP3-220ENST00000581160 KRTAP4-11Q9BYQ6 195 aa2.37□□□□□ -2.03
CDK5RAP3-220ENST00000581160 OBSCNQ5VST9 7968 aa2.35□□□□□ -2.03
CDK5RAP3-220ENST00000581160 LCE3DQ9BYE3 92 aa2.32□□□□□ -2.04
CDK5RAP3-220ENST00000581160 KRTAP5-8O75690 187 aa2.28□□□□□ -2.04
CDK5RAP3-220ENST00000581160 LCE1EQ5T753 118 aa2.27□□□□□ -2.05
CDK5RAP3-220ENST00000581160 LCE3EQ5T5B0 92 aa2.24□□□□□ -2.05
CDK5RAP3-220ENST00000581160 KRTAP5-1Q6L8H4 278 aa2.24□□□□□ -2.05
CDK5RAP3-220ENST00000581160 MUC5ACP98088 5654 aa2.17□□□□□ -2.06
CDK5RAP3-220ENST00000581160 AHNAKQ09666 5890 aaKnown RBP2.16□□□□□ -2.06
CDK5RAP3-220ENST00000581160 A0A0A0MQY5 61 aa2.15□□□□□ -2.07
CDK5RAP3-220ENST00000581160 LCE1CQ5T751 118 aa2.1□□□□□ -2.07
CDK5RAP3-220ENST00000581160 LCE1BQ5T7P3 118 aa2.1□□□□□ -2.07
CDK5RAP3-220ENST00000581160 KRTAP9-9Q9BYP9 154 aa2.1□□□□□ -2.07
CDK5RAP3-220ENST00000581160 KRTAP4-2Q9BYR5 136 aa2.1□□□□□ -2.07
CDK5RAP3-220ENST00000581160 INE1O15225 51 aa2.09□□□□□ -2.07
CDK5RAP3-220ENST00000581160 MUC5BQ9HC84 5762 aaPredicted RBP2.09□□□□□ -2.08
CDK5RAP3-220ENST00000581160 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.95□□□□□ -2.1
CDK5RAP3-220ENST00000581160 KRTAP5-11Q6L8G4 156 aa1.86□□□□□ -2.11
CDK5RAP3-220ENST00000581160 PRM1P04553 51 aa1.84□□□□□ -2.11
CDK5RAP3-220ENST00000581160 H3BS24 57 aa1.81□□□□□ -2.12
CDK5RAP3-220ENST00000581160 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
CDK5RAP3-220ENST00000581160 KRTAP4-12Q9BQ66 201 aa1.79□□□□□ -2.12
CDK5RAP3-220ENST00000581160 LCE1FQ5T754 118 aa1.76□□□□□ -2.13
CDK5RAP3-220ENST00000581160 KRTAP4-4Q9BYR3 166 aa1.61□□□□□ -2.15
CDK5RAP3-220ENST00000581160 PHGR1C9JFL3 82 aa1.6□□□□□ -2.15
CDK5RAP3-220ENST00000581160 MUC19Q7Z5P9 8384 aa1.4□□□□□ -2.18
CDK5RAP3-220ENST00000581160 KRTAP21-1Q3LI58 79 aa1.18□□□□□ -2.22
CDK5RAP3-220ENST00000581160 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 167.6 ms