RNA–Protein interactions for RNA: ENST00000581055.1

TOP2A-205, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 4

Gene TOP2A, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-205ENST00000581055 KRTAP2-4Q9BYR9 128 aa6.8□□□□□ -1.32
TOP2A-205ENST00000581055 SPRR2DP22532 72 aa6.78□□□□□ -1.32
TOP2A-205ENST00000581055 KRTAP19-7Q3SYF9 63 aa6.77□□□□□ -1.33
TOP2A-205ENST00000581055 KRTAP4-7Q9BYR0 210 aa6.73□□□□□ -1.33
TOP2A-205ENST00000581055 A6NED7 52 aa6.72□□□□□ -1.33
TOP2A-205ENST00000581055 MT1EP04732 61 aa6.72□□□□□ -1.33
TOP2A-205ENST00000581055 KRTAP19-5Q3LI72 72 aa6.69□□□□□ -1.34
TOP2A-205ENST00000581055 LCE3AQ5TA76 89 aa6.66□□□□□ -1.34
TOP2A-205ENST00000581055 KRTAP4-9Q9BYQ8 210 aa6.63□□□□□ -1.35
TOP2A-205ENST00000581055 KRTAP19-3Q7Z4W3 81 aa6.62□□□□□ -1.35
TOP2A-205ENST00000581055 LCE5AQ5TCM9 118 aa6.6□□□□□ -1.35
TOP2A-205ENST00000581055 KRTAP2-2Q9BYT5 123 aa6.6□□□□□ -1.35
TOP2A-205ENST00000581055 KRTAP2-1Q9BYU5 128 aa6.6□□□□□ -1.35
TOP2A-205ENST00000581055 KRTAP25-1Q3LHN0 102 aa6.59□□□□□ -1.35
TOP2A-205ENST00000581055 MT1GP13640 62 aa6.52□□□□□ -1.37
TOP2A-205ENST00000581055 PP632Q6XCG6 107 aa6.49□□□□□ -1.37
TOP2A-205ENST00000581055 MT1LQ93083 61 aa6.46□□□□□ -1.38
TOP2A-205ENST00000581055 KRTAP4-2Q9BYR5 136 aa6.45□□□□□ -1.38
TOP2A-205ENST00000581055 KRTAP12-3P60328 96 aa6.44□□□□□ -1.38
TOP2A-205ENST00000581055 CDC42SE1Q9NRR8 79 aa6.44□□□□□ -1.38
TOP2A-205ENST00000581055 KRTAP4-11Q9BYQ6 195 aa6.42□□□□□ -1.38
TOP2A-205ENST00000581055 MT1MQ8N339 61 aa6.37□□□□□ -1.39
TOP2A-205ENST00000581055 KRTAP23-1A1A580 65 aa6.36□□□□□ -1.39
TOP2A-205ENST00000581055 DSTQ03001 7570 aaKnown RBP6.35□□□□□ -1.39
TOP2A-205ENST00000581055 ROMO1P60602 79 aa6.34□□□□□ -1.39
TOP2A-205ENST00000581055 KRTAP4-3Q9BYR4 195 aa6.18□□□□□ -1.42
TOP2A-205ENST00000581055 KRTAP15-1Q3LI76 137 aa6.11□□□□□ -1.43
TOP2A-205ENST00000581055 BRK1Q8WUW1 75 aa6.03□□□□□ -1.44
TOP2A-205ENST00000581055 LCE3CQ5T5A8 94 aa5.95□□□□□ -1.46
TOP2A-205ENST00000581055 KRTAP5-4Q6L8H1 288 aa5.93□□□□□ -1.46
TOP2A-205ENST00000581055 MT4P47944 62 aa5.89□□□□□ -1.47
TOP2A-205ENST00000581055 HMCN1Q96RW7 5635 aa5.83□□□□□ -1.48
TOP2A-205ENST00000581055 KRTAP5-5Q701N2 237 aaPredicted RBP5.81□□□□□ -1.48
TOP2A-205ENST00000581055 GPR98Q8WXG9 6306 aa5.71□□□□□ -1.5
TOP2A-205ENST00000581055 PMAIP1Q13794 54 aa5.7□□□□□ -1.5
TOP2A-205ENST00000581055 KRTAP12-4P60329 112 aa5.67□□□□□ -1.5
TOP2A-205ENST00000581055 SPRR5A0A1B0GTR4 108 aa5.62□□□□□ -1.51
TOP2A-205ENST00000581055 KRTAP20-2Q3LI61 65 aa5.58□□□□□ -1.52
TOP2A-205ENST00000581055 KRTAP5-3Q6L8H2 238 aa5.58□□□□□ -1.52
TOP2A-205ENST00000581055 KRTAP9-6A8MVA2 160 aa5.55□□□□□ -1.52
TOP2A-205ENST00000581055 MT1AP04731 61 aa5.51□□□□□ -1.53
TOP2A-205ENST00000581055 SYNE1Q8NF91 8797 aaKnown RBP5.51□□□□□ -1.53
TOP2A-205ENST00000581055 AHNAK2Q8IVF2 5795 aa5.5□□□□□ -1.53
TOP2A-205ENST00000581055 PRO0628Q9UI54 55 aa5.47□□□□□ -1.53
TOP2A-205ENST00000581055 KRTAP6-1Q3LI64 71 aa5.44□□□□□ -1.54
TOP2A-205ENST00000581055 PRAC1Q96KF2 57 aa5.37□□□□□ -1.55
TOP2A-205ENST00000581055 KRTAP5-10Q6L8G5 202 aa5.36□□□□□ -1.55
TOP2A-205ENST00000581055 KRTAP5-2Q701N4 177 aa5.23□□□□□ -1.57
TOP2A-205ENST00000581055 KRTAP6-2Q3LI66 62 aa5.17□□□□□ -1.58
TOP2A-205ENST00000581055 KTN1-AS1Q86SY8 53 aa5.17□□□□□ -1.58
TOP2A-205ENST00000581055 KRTAP5-7Q6L8G8 165 aa5.14□□□□□ -1.59
TOP2A-205ENST00000581055 MT3P25713 68 aa5.06□□□□□ -1.6
TOP2A-205ENST00000581055 SVIPQ8NHG7 77 aa4.95□□□□□ -1.62
TOP2A-205ENST00000581055 KRTAP5-8O75690 187 aa4.84□□□□□ -1.63
TOP2A-205ENST00000581055 OBSCNQ5VST9 7968 aa4.82□□□□□ -1.64
TOP2A-205ENST00000581055 KRTAP5-1Q6L8H4 278 aa4.64□□□□□ -1.67
TOP2A-205ENST00000581055 LUZP6Q538Z0 58 aa4.61□□□□□ -1.67
TOP2A-205ENST00000581055 LCE1EQ5T753 118 aa4.59□□□□□ -1.67
TOP2A-205ENST00000581055 MUC5ACP98088 5654 aa4.54□□□□□ -1.68
TOP2A-205ENST00000581055 AHNAKQ09666 5890 aaKnown RBP4.51□□□□□ -1.69
TOP2A-205ENST00000581055 MUC5BQ9HC84 5762 aaPredicted RBP4.51□□□□□ -1.69
TOP2A-205ENST00000581055 LCE3DQ9BYE3 92 aa4.36□□□□□ -1.71
TOP2A-205ENST00000581055 KRTAP5-11Q6L8G4 156 aa4.35□□□□□ -1.71
TOP2A-205ENST00000581055 A0A0A0MQY5 61 aa4.28□□□□□ -1.72
TOP2A-205ENST00000581055 LCE1BQ5T7P3 118 aa4.28□□□□□ -1.72
TOP2A-205ENST00000581055 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.28□□□□□ -1.72
TOP2A-205ENST00000581055 LCE1CQ5T751 118 aa4.25□□□□□ -1.73
TOP2A-205ENST00000581055 LCE3EQ5T5B0 92 aa4.14□□□□□ -1.75
TOP2A-205ENST00000581055 LCE1FQ5T754 118 aa3.98□□□□□ -1.77
TOP2A-205ENST00000581055 NDUFAF8A1L188 74 aa3.85□□□□□ -1.79
TOP2A-205ENST00000581055 KRTAP21-2Q3LI59 83 aa3.58□□□□□ -1.84
TOP2A-205ENST00000581055 KRTAP4-4Q9BYR3 166 aa3.56□□□□□ -1.84
TOP2A-205ENST00000581055 PHGR1C9JFL3 82 aa3.28□□□□□ -1.88
TOP2A-205ENST00000581055 PRM1P04553 51 aa3.23□□□□□ -1.89
TOP2A-205ENST00000581055 INE1O15225 51 aa3.18□□□□□ -1.9
TOP2A-205ENST00000581055 MUC19Q7Z5P9 8384 aa2.95□□□□□ -1.94
TOP2A-205ENST00000581055 KRTAP21-1Q3LI58 79 aa2.4□□□□□ -2.03
TOP2A-205ENST00000581055 MUC16Q8WXI7 14507 aa2.12□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 11.8 ms