RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 KRTAP6-3Q3LI67 103 aa4.09□□□□□ -1.75
CCDC47-203ENST00000580986 TNP1P09430 55 aa4.07□□□□□ -1.76
CCDC47-203ENST00000580986 KRTAP5-9P26371 169 aa4.06□□□□□ -1.76
CCDC47-203ENST00000580986 SYNE2Q8WXH0 6885 aaKnown RBP4.03□□□□□ -1.76
CCDC47-203ENST00000580986 KRTAP8-1Q8IUC2 63 aa4.03□□□□□ -1.76
CCDC47-203ENST00000580986 MT3P25713 68 aa4.02□□□□□ -1.77
CCDC47-203ENST00000580986 KRTAP25-1Q3LHN0 102 aa4.02□□□□□ -1.77
CCDC47-203ENST00000580986 BRK1Q8WUW1 75 aa4□□□□□ -1.77
CCDC47-203ENST00000580986 KMT2DO14686 5537 aa4□□□□□ -1.77
CCDC47-203ENST00000580986 KRTAP5-4Q6L8H1 288 aa3.99□□□□□ -1.77
CCDC47-203ENST00000580986 KRTAP4-4Q9BYR3 166 aa3.97□□□□□ -1.77
CCDC47-203ENST00000580986 ROMO1P60602 79 aa3.96□□□□□ -1.78
CCDC47-203ENST00000580986 SPRR2FQ96RM1 72 aa3.93□□□□□ -1.78
CCDC47-203ENST00000580986 LCE3AQ5TA76 89 aa3.91□□□□□ -1.78
CCDC47-203ENST00000580986 KRTAP19-7Q3SYF9 63 aa3.89□□□□□ -1.79
CCDC47-203ENST00000580986 MUC12Q9UKN1 5478 aa3.84□□□□□ -1.79
CCDC47-203ENST00000580986 MT1EP04732 61 aa3.84□□□□□ -1.79
CCDC47-203ENST00000580986 KRTAP19-5Q3LI72 72 aa3.84□□□□□ -1.79
CCDC47-203ENST00000580986 PP632Q6XCG6 107 aa3.84□□□□□ -1.79
CCDC47-203ENST00000580986 PRO0628Q9UI54 55 aa3.82□□□□□ -1.8
CCDC47-203ENST00000580986 KRTAP9-6A8MVA2 160 aa3.8□□□□□ -1.8
CCDC47-203ENST00000580986 SPRR2EP22531 72 aa3.8□□□□□ -1.8
CCDC47-203ENST00000580986 SPRR2BP35325 72 aa3.8□□□□□ -1.8
CCDC47-203ENST00000580986 SPRR2AP35326 72 aa3.8□□□□□ -1.8
CCDC47-203ENST00000580986 KRTAP12-3P60328 96 aa3.79□□□□□ -1.8
CCDC47-203ENST00000580986 PMAIP1Q13794 54 aa3.79□□□□□ -1.8
CCDC47-203ENST00000580986 MDN1Q9NU22 5596 aa3.78□□□□□ -1.8
CCDC47-203ENST00000580986 NEBP20929 6669 aa3.77□□□□□ -1.81
CCDC47-203ENST00000580986 KRTAP19-3Q7Z4W3 81 aa3.76□□□□□ -1.81
CCDC47-203ENST00000580986 MT1GP13640 62 aa3.72□□□□□ -1.81
CCDC47-203ENST00000580986 MT1LQ93083 61 aa3.72□□□□□ -1.81
CCDC47-203ENST00000580986 SPRR2DP22532 72 aa3.67□□□□□ -1.82
CCDC47-203ENST00000580986 MT1MQ8N339 61 aa3.63□□□□□ -1.83
CCDC47-203ENST00000580986 SVIPQ8NHG7 77 aa3.62□□□□□ -1.83
CCDC47-203ENST00000580986 KRTAP2-3P0C7H8 128 aa3.61□□□□□ -1.83
CCDC47-203ENST00000580986 KRTAP20-1Q3LI63 56 aa3.61□□□□□ -1.83
CCDC47-203ENST00000580986 KRTAP2-4Q9BYR9 128 aa3.61□□□□□ -1.83
CCDC47-203ENST00000580986 OBSCNQ5VST9 7968 aa3.6□□□□□ -1.83
CCDC47-203ENST00000580986 KTN1-AS1Q86SY8 53 aa3.58□□□□□ -1.84
CCDC47-203ENST00000580986 LCE3CQ5T5A8 94 aa3.52□□□□□ -1.85
CCDC47-203ENST00000580986 LCE1FQ5T754 118 aa3.52□□□□□ -1.85
CCDC47-203ENST00000580986 PRAC1Q96KF2 57 aa3.52□□□□□ -1.85
CCDC47-203ENST00000580986 KRTAP2-1Q9BYU5 128 aa3.52□□□□□ -1.85
CCDC47-203ENST00000580986 DSTQ03001 7570 aaKnown RBP3.47□□□□□ -1.85
CCDC47-203ENST00000580986 KRTAP4-3Q9BYR4 195 aa3.46□□□□□ -1.86
CCDC47-203ENST00000580986 A0A0A0MQY5 61 aa3.42□□□□□ -1.86
CCDC47-203ENST00000580986 KRTAP5-2Q701N4 177 aa3.4□□□□□ -1.87
CCDC47-203ENST00000580986 KRTAP5-5Q701N2 237 aaPredicted RBP3.34□□□□□ -1.87
CCDC47-203ENST00000580986 SPRR5A0A1B0GTR4 108 aa3.28□□□□□ -1.88
CCDC47-203ENST00000580986 MT1AP04731 61 aa3.18□□□□□ -1.9
CCDC47-203ENST00000580986 KRTAP12-4P60329 112 aa3.16□□□□□ -1.9
CCDC47-203ENST00000580986 MT4P47944 62 aa3.15□□□□□ -1.91
CCDC47-203ENST00000580986 KRTAP6-1Q3LI64 71 aa3.11□□□□□ -1.91
CCDC47-203ENST00000580986 HMCN1Q96RW7 5635 aa3.1□□□□□ -1.91
CCDC47-203ENST00000580986 SYNE1Q8NF91 8797 aaKnown RBP3.1□□□□□ -1.91
CCDC47-203ENST00000580986 KRTAP20-2Q3LI61 65 aa3.09□□□□□ -1.91
CCDC47-203ENST00000580986 LCE3EQ5T5B0 92 aa3.07□□□□□ -1.92
CCDC47-203ENST00000580986 LUZP6Q538Z0 58 aa3□□□□□ -1.93
CCDC47-203ENST00000580986 KRTAP6-2Q3LI66 62 aa2.91□□□□□ -1.94
CCDC47-203ENST00000580986 NDUFAF8A1L188 74 aa2.89□□□□□ -1.95
CCDC47-203ENST00000580986 KRTAP5-8O75690 187 aa2.85□□□□□ -1.95
CCDC47-203ENST00000580986 LCE1CQ5T751 118 aa2.84□□□□□ -1.95
CCDC47-203ENST00000580986 LCE1BQ5T7P3 118 aa2.84□□□□□ -1.95
CCDC47-203ENST00000580986 KRTAP5-10Q6L8G5 202 aa2.84□□□□□ -1.95
CCDC47-203ENST00000580986 AHNAK2Q8IVF2 5795 aa2.83□□□□□ -1.96
CCDC47-203ENST00000580986 GPR98Q8WXG9 6306 aa2.76□□□□□ -1.97
CCDC47-203ENST00000580986 KRTAP5-7Q6L8G8 165 aa2.7□□□□□ -1.98
CCDC47-203ENST00000580986 LCE3DQ9BYE3 92 aa2.6□□□□□ -1.99
CCDC47-203ENST00000580986 MUC5ACP98088 5654 aa2.43□□□□□ -2.02
CCDC47-203ENST00000580986 MUC19Q7Z5P9 8384 aa2.39□□□□□ -2.03
CCDC47-203ENST00000580986 MUC5BQ9HC84 5762 aaPredicted RBP2.28□□□□□ -2.04
CCDC47-203ENST00000580986 INE1O15225 51 aa2.27□□□□□ -2.05
CCDC47-203ENST00000580986 AHNAKQ09666 5890 aaKnown RBP2.2□□□□□ -2.06
CCDC47-203ENST00000580986 KRTAP21-2Q3LI59 83 aa2.07□□□□□ -2.08
CCDC47-203ENST00000580986 PRM1P04553 51 aa2.02□□□□□ -2.09
CCDC47-203ENST00000580986 PHGR1C9JFL3 82 aa1.86□□□□□ -2.11
CCDC47-203ENST00000580986 KRTAP21-1Q3LI58 79 aa1.25□□□□□ -2.21
CCDC47-203ENST00000580986 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 100.6 ms