RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 HMCN1Q96RW7 5635 aa3.68□□□□□ -1.82
GGA3-210ENST00000580799 Q1T7F1 81 aa3.68□□□□□ -1.82
GGA3-210ENST00000580799 MT1MQ8N339 61 aa3.67□□□□□ -1.82
GGA3-210ENST00000580799 KRTAP19-4Q3LI73 84 aa3.66□□□□□ -1.82
GGA3-210ENST00000580799 SPANXA2-OT1Q8N9U9 137 aa3.66□□□□□ -1.82
GGA3-210ENST00000580799 KRTAP5-10Q6L8G5 202 aa3.65□□□□□ -1.83
GGA3-210ENST00000580799 KRTAP5-4Q6L8H1 288 aa3.64□□□□□ -1.83
GGA3-210ENST00000580799 MT1LQ93083 61 aa3.63□□□□□ -1.83
GGA3-210ENST00000580799 SNURFQ9Y675 71 aa3.63□□□□□ -1.83
GGA3-210ENST00000580799 AHNAK2Q8IVF2 5795 aa3.6□□□□□ -1.83
GGA3-210ENST00000580799 SPINT4Q6UDR6 99 aa3.6□□□□□ -1.83
GGA3-210ENST00000580799 KRTAP12-1P59990 96 aa3.57□□□□□ -1.84
GGA3-210ENST00000580799 SPATA8Q6RVD6 105 aa3.57□□□□□ -1.84
GGA3-210ENST00000580799 KRTAP4-3Q9BYR4 195 aa3.56□□□□□ -1.84
GGA3-210ENST00000580799 KRTAP5-7Q6L8G8 165 aa3.55□□□□□ -1.84
GGA3-210ENST00000580799 A0A1B0GU33 70 aa3.54□□□□□ -1.84
GGA3-210ENST00000580799 COA5Q86WW8 74 aa3.54□□□□□ -1.84
GGA3-210ENST00000580799 C10orf95Q9H7T3 257 aa3.53□□□□□ -1.84
GGA3-210ENST00000580799 KRTAP5-3Q6L8H2 238 aa3.52□□□□□ -1.85
GGA3-210ENST00000580799 LCE3AQ5TA76 89 aa3.51□□□□□ -1.85
GGA3-210ENST00000580799 TNP1P09430 55 aa3.48□□□□□ -1.85
GGA3-210ENST00000580799 CDC42SE1Q9NRR8 79 aa3.48□□□□□ -1.85
GGA3-210ENST00000580799 KRTAP9-9Q9BYP9 154 aa3.47□□□□□ -1.85
GGA3-210ENST00000580799 KRTAP9-4Q9BYQ2 154 aa3.47□□□□□ -1.85
GGA3-210ENST00000580799 KRTAP20-2Q3LI61 65 aa3.45□□□□□ -1.86
GGA3-210ENST00000580799 SPRR5A0A1B0GTR4 108 aa3.44□□□□□ -1.86
GGA3-210ENST00000580799 PSPHP1O15172 72 aa3.44□□□□□ -1.86
GGA3-210ENST00000580799 KRTAP4-7Q9BYR0 210 aa3.41□□□□□ -1.86
GGA3-210ENST00000580799 KRTAP5-5Q701N2 237 aaPredicted RBP3.4□□□□□ -1.87
GGA3-210ENST00000580799 A8MU10 97 aa3.39□□□□□ -1.87
GGA3-210ENST00000580799 KRTAP12-3P60328 96 aa3.39□□□□□ -1.87
GGA3-210ENST00000580799 A0A1B0GU69 56 aa3.38□□□□□ -1.87
GGA3-210ENST00000580799 A6NED7 52 aa3.38□□□□□ -1.87
GGA3-210ENST00000580799 KRTAP12-4P60329 112 aa3.38□□□□□ -1.87
GGA3-210ENST00000580799 A0A0A0MQY5 61 aa3.36□□□□□ -1.87
GGA3-210ENST00000580799 PRR15LQ9BU68 103 aa3.36□□□□□ -1.87
GGA3-210ENST00000580799 LINC01558Q9Y6Z2 57 aa3.36□□□□□ -1.87
GGA3-210ENST00000580799 KRTAP15-1Q3LI76 137 aa3.32□□□□□ -1.88
GGA3-210ENST00000580799 PRAC1Q96KF2 57 aa3.25□□□□□ -1.89
GGA3-210ENST00000580799 ROMO1P60602 79 aa3.23□□□□□ -1.89
GGA3-210ENST00000580799 KRTAP4-11Q9BYQ6 195 aa3.2□□□□□ -1.9
GGA3-210ENST00000580799 SYNE1Q8NF91 8797 aaKnown RBP3.19□□□□□ -1.9
GGA3-210ENST00000580799 KRTAP25-1Q3LHN0 102 aa3.18□□□□□ -1.9
GGA3-210ENST00000580799 KRTAP5-2Q701N4 177 aa3.15□□□□□ -1.91
GGA3-210ENST00000580799 UQCR11O14957 56 aa3.13□□□□□ -1.91
GGA3-210ENST00000580799 MIR22HGQ0VDD5 57 aa3.13□□□□□ -1.91
GGA3-210ENST00000580799 KRTAP5-8O75690 187 aa3.1□□□□□ -1.91
GGA3-210ENST00000580799 LCE3CQ5T5A8 94 aa3.1□□□□□ -1.91
GGA3-210ENST00000580799 MUC5ACP98088 5654 aa3.09□□□□□ -1.91
GGA3-210ENST00000580799 MT1AP04731 61 aa3.09□□□□□ -1.91
GGA3-210ENST00000580799 AHNAKQ09666 5890 aaKnown RBP3.08□□□□□ -1.92
GGA3-210ENST00000580799 K7ERS5 55 aa3.07□□□□□ -1.92
GGA3-210ENST00000580799 KRTAP6-1Q3LI64 71 aa3.07□□□□□ -1.92
GGA3-210ENST00000580799 KRTAP4-2Q9BYR5 136 aa3.06□□□□□ -1.92
GGA3-210ENST00000580799 LUZP6Q538Z0 58 aa3□□□□□ -1.93
GGA3-210ENST00000580799 KRTAP6-2Q3LI66 62 aa2.99□□□□□ -1.93
GGA3-210ENST00000580799 MUC5BQ9HC84 5762 aaPredicted RBP2.97□□□□□ -1.93
GGA3-210ENST00000580799 OBSCNQ5VST9 7968 aa2.96□□□□□ -1.94
GGA3-210ENST00000580799 NDUFAF8A1L188 74 aa2.94□□□□□ -1.94
GGA3-210ENST00000580799 KRTAP9-6A8MVA2 160 aa2.91□□□□□ -1.94
GGA3-210ENST00000580799 KRTAP5-1Q6L8H4 278 aa2.86□□□□□ -1.95
GGA3-210ENST00000580799 MT3P25713 68 aa2.85□□□□□ -1.95
GGA3-210ENST00000580799 LCE1EQ5T753 118 aa2.69□□□□□ -1.98
GGA3-210ENST00000580799 INE1O15225 51 aa2.58□□□□□ -2
GGA3-210ENST00000580799 LCE1BQ5T7P3 118 aa2.51□□□□□ -2.01
GGA3-210ENST00000580799 LCE1CQ5T751 118 aa2.49□□□□□ -2.01
GGA3-210ENST00000580799 LCE1FQ5T754 118 aa2.48□□□□□ -2.01
GGA3-210ENST00000580799 KRTAP5-11Q6L8G4 156 aa2.28□□□□□ -2.04
GGA3-210ENST00000580799 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.24□□□□□ -2.05
GGA3-210ENST00000580799 LCE3DQ9BYE3 92 aa2.2□□□□□ -2.06
GGA3-210ENST00000580799 PHGR1C9JFL3 82 aa2.14□□□□□ -2.07
GGA3-210ENST00000580799 LCE3EQ5T5B0 92 aa2.1□□□□□ -2.07
GGA3-210ENST00000580799 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
GGA3-210ENST00000580799 KRTAP4-4Q9BYR3 166 aa1.87□□□□□ -2.11
GGA3-210ENST00000580799 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
GGA3-210ENST00000580799 KRTAP21-1Q3LI58 79 aa1.64□□□□□ -2.15
GGA3-210ENST00000580799 PRM1P04553 51 aa1.48□□□□□ -2.17
GGA3-210ENST00000580799 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 1571.9 ms