RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 KRTAP5-3Q6L8H2 238 aa4.15□□□□□ -1.75
NDEL1-208ENST00000580237 LINC01558Q9Y6Z2 57 aa4.13□□□□□ -1.75
NDEL1-208ENST00000580237 KRTAP2-2Q9BYT5 123 aa4.09□□□□□ -1.75
NDEL1-208ENST00000580237 KRTAP2-1Q9BYU5 128 aa4.09□□□□□ -1.75
NDEL1-208ENST00000580237 UQCR11O14957 56 aa4.06□□□□□ -1.76
NDEL1-208ENST00000580237 KRTAP19-7Q3SYF9 63 aa4.06□□□□□ -1.76
NDEL1-208ENST00000580237 MT1EP04732 61 aa4.05□□□□□ -1.76
NDEL1-208ENST00000580237 TNP1P09430 55 aa4.05□□□□□ -1.76
NDEL1-208ENST00000580237 KRTAP19-5Q3LI72 72 aa4.01□□□□□ -1.77
NDEL1-208ENST00000580237 KRTAP19-3Q7Z4W3 81 aa4.01□□□□□ -1.77
NDEL1-208ENST00000580237 C10orf95Q9H7T3 257 aa4.01□□□□□ -1.77
NDEL1-208ENST00000580237 MIR22HGQ0VDD5 57 aa3.98□□□□□ -1.77
NDEL1-208ENST00000580237 LCE3AQ5TA76 89 aa3.97□□□□□ -1.77
NDEL1-208ENST00000580237 PRO0628Q9UI54 55 aa3.96□□□□□ -1.78
NDEL1-208ENST00000580237 K7ERS5 55 aa3.95□□□□□ -1.78
NDEL1-208ENST00000580237 PSPHP1O15172 72 aa3.94□□□□□ -1.78
NDEL1-208ENST00000580237 PP632Q6XCG6 107 aa3.94□□□□□ -1.78
NDEL1-208ENST00000580237 MT1GP13640 62 aa3.91□□□□□ -1.78
NDEL1-208ENST00000580237 Q1T7F1 81 aa3.89□□□□□ -1.79
NDEL1-208ENST00000580237 KRTAP23-1A1A580 65 aa3.88□□□□□ -1.79
NDEL1-208ENST00000580237 MT1LQ93083 61 aa3.88□□□□□ -1.79
NDEL1-208ENST00000580237 MT1MQ8N339 61 aa3.86□□□□□ -1.79
NDEL1-208ENST00000580237 A6NED7 52 aa3.84□□□□□ -1.79
NDEL1-208ENST00000580237 KRTAP25-1Q3LHN0 102 aa3.84□□□□□ -1.79
NDEL1-208ENST00000580237 DSTQ03001 7570 aaKnown RBP3.84□□□□□ -1.8
NDEL1-208ENST00000580237 KRTAP12-3P60328 96 aa3.82□□□□□ -1.8
NDEL1-208ENST00000580237 PMAIP1Q13794 54 aa3.79□□□□□ -1.8
NDEL1-208ENST00000580237 KRTAP4-3Q9BYR4 195 aa3.76□□□□□ -1.81
NDEL1-208ENST00000580237 RPS28P62857 69 aaKnown RBP3.73□□□□□ -1.81
NDEL1-208ENST00000580237 CDC42SE1Q9NRR8 79 aa3.72□□□□□ -1.81
NDEL1-208ENST00000580237 MT4P47944 62 aa3.68□□□□□ -1.82
NDEL1-208ENST00000580237 ROMO1P60602 79 aa3.64□□□□□ -1.83
NDEL1-208ENST00000580237 PRAC1Q96KF2 57 aa3.64□□□□□ -1.83
NDEL1-208ENST00000580237 KRTAP5-4Q6L8H1 288 aa3.6□□□□□ -1.83
NDEL1-208ENST00000580237 KRTAP15-1Q3LI76 137 aa3.59□□□□□ -1.83
NDEL1-208ENST00000580237 GPR98Q8WXG9 6306 aa3.55□□□□□ -1.84
NDEL1-208ENST00000580237 KTN1-AS1Q86SY8 53 aa3.54□□□□□ -1.84
NDEL1-208ENST00000580237 HMCN1Q96RW7 5635 aa3.53□□□□□ -1.84
NDEL1-208ENST00000580237 LCE3CQ5T5A8 94 aa3.51□□□□□ -1.85
NDEL1-208ENST00000580237 KRTAP5-5Q701N2 237 aaPredicted RBP3.49□□□□□ -1.85
NDEL1-208ENST00000580237 BRK1Q8WUW1 75 aa3.47□□□□□ -1.85
NDEL1-208ENST00000580237 KRTAP12-4P60329 112 aa3.45□□□□□ -1.86
NDEL1-208ENST00000580237 KRTAP20-2Q3LI61 65 aa3.42□□□□□ -1.86
NDEL1-208ENST00000580237 SPRR5A0A1B0GTR4 108 aa3.41□□□□□ -1.86
NDEL1-208ENST00000580237 AHNAK2Q8IVF2 5795 aa3.39□□□□□ -1.87
NDEL1-208ENST00000580237 KRTAP5-10Q6L8G5 202 aa3.36□□□□□ -1.87
NDEL1-208ENST00000580237 LUZP6Q538Z0 58 aa3.35□□□□□ -1.87
NDEL1-208ENST00000580237 MT1AP04731 61 aa3.32□□□□□ -1.88
NDEL1-208ENST00000580237 SYNE1Q8NF91 8797 aaKnown RBP3.28□□□□□ -1.88
NDEL1-208ENST00000580237 KRTAP6-1Q3LI64 71 aa3.28□□□□□ -1.88
NDEL1-208ENST00000580237 KRTAP9-6A8MVA2 160 aa3.27□□□□□ -1.89
NDEL1-208ENST00000580237 KRTAP5-7Q6L8G8 165 aa3.22□□□□□ -1.89
NDEL1-208ENST00000580237 KRTAP5-2Q701N4 177 aa3.17□□□□□ -1.9
NDEL1-208ENST00000580237 KRTAP6-2Q3LI66 62 aa3.13□□□□□ -1.91
NDEL1-208ENST00000580237 NDUFAF8A1L188 74 aa3.08□□□□□ -1.92
NDEL1-208ENST00000580237 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.04□□□□□ -1.92
NDEL1-208ENST00000580237 MT3P25713 68 aa3.03□□□□□ -1.92
NDEL1-208ENST00000580237 KRTAP5-8O75690 187 aa2.98□□□□□ -1.93
NDEL1-208ENST00000580237 KRTAP5-11Q6L8G4 156 aa2.94□□□□□ -1.94
NDEL1-208ENST00000580237 OBSCNQ5VST9 7968 aa2.93□□□□□ -1.94
NDEL1-208ENST00000580237 KRTAP5-1Q6L8H4 278 aa2.82□□□□□ -1.96
NDEL1-208ENST00000580237 MUC5ACP98088 5654 aa2.77□□□□□ -1.97
NDEL1-208ENST00000580237 LCE1EQ5T753 118 aa2.75□□□□□ -1.97
NDEL1-208ENST00000580237 MUC5BQ9HC84 5762 aaPredicted RBP2.75□□□□□ -1.97
NDEL1-208ENST00000580237 AHNAKQ09666 5890 aaKnown RBP2.74□□□□□ -1.97
NDEL1-208ENST00000580237 LCE1BQ5T7P3 118 aa2.63□□□□□ -1.99
NDEL1-208ENST00000580237 LCE3DQ9BYE3 92 aa2.55□□□□□ -2
NDEL1-208ENST00000580237 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
NDEL1-208ENST00000580237 LCE1CQ5T751 118 aa2.54□□□□□ -2
NDEL1-208ENST00000580237 INE1O15225 51 aa2.52□□□□□ -2.01
NDEL1-208ENST00000580237 LCE3EQ5T5B0 92 aa2.41□□□□□ -2.02
NDEL1-208ENST00000580237 LCE1FQ5T754 118 aa2.36□□□□□ -2.03
NDEL1-208ENST00000580237 KRTAP21-2Q3LI59 83 aa2.13□□□□□ -2.07
NDEL1-208ENST00000580237 PHGR1C9JFL3 82 aa2□□□□□ -2.09
NDEL1-208ENST00000580237 PRM1P04553 51 aa1.86□□□□□ -2.11
NDEL1-208ENST00000580237 MUC19Q7Z5P9 8384 aa1.79□□□□□ -2.12
NDEL1-208ENST00000580237 KRTAP21-1Q3LI58 79 aa1.5□□□□□ -2.17
NDEL1-208ENST00000580237 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 126.4 ms