RNA–Protein interactions for RNA: ENST00000579780.5

CDK5RAP3-215, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 611 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-215ENST00000579780 MUC12Q9UKN1 5478 aa6.05□□□□□ -1.44
CDK5RAP3-215ENST00000579780 KRTAP15-1Q3LI76 137 aa5.98□□□□□ -1.45
CDK5RAP3-215ENST00000579780 LCE1AQ5T7P2 110 aa5.98□□□□□ -1.45
CDK5RAP3-215ENST00000579780 KRTAP19-3Q7Z4W3 81 aa5.98□□□□□ -1.45
CDK5RAP3-215ENST00000579780 MT1LQ93083 61 aa5.98□□□□□ -1.45
CDK5RAP3-215ENST00000579780 SPRR2EP22531 72 aa5.97□□□□□ -1.45
CDK5RAP3-215ENST00000579780 SPRR2BP35325 72 aa5.97□□□□□ -1.45
CDK5RAP3-215ENST00000579780 SPRR2AP35326 72 aa5.97□□□□□ -1.45
CDK5RAP3-215ENST00000579780 KRTAP4-12Q9BQ66 201 aa5.95□□□□□ -1.46
CDK5RAP3-215ENST00000579780 MDN1Q9NU22 5596 aa5.93□□□□□ -1.46
CDK5RAP3-215ENST00000579780 SVIPQ8NHG7 77 aa5.91□□□□□ -1.46
CDK5RAP3-215ENST00000579780 LCE5AQ5TCM9 118 aa5.9□□□□□ -1.46
CDK5RAP3-215ENST00000579780 MT1GP13640 62 aa5.89□□□□□ -1.47
CDK5RAP3-215ENST00000579780 KRTAP19-4Q3LI73 84 aa5.89□□□□□ -1.47
CDK5RAP3-215ENST00000579780 NEBP20929 6669 aa5.84□□□□□ -1.47
CDK5RAP3-215ENST00000579780 LCE3BQ5TA77 95 aa5.84□□□□□ -1.47
CDK5RAP3-215ENST00000579780 MT1MQ8N339 61 aa5.82□□□□□ -1.48
CDK5RAP3-215ENST00000579780 SPRR2DP22532 72 aa5.77□□□□□ -1.49
CDK5RAP3-215ENST00000579780 LCE3CQ5T5A8 94 aa5.73□□□□□ -1.49
CDK5RAP3-215ENST00000579780 KRTAP9-9Q9BYP9 154 aa5.7□□□□□ -1.5
CDK5RAP3-215ENST00000579780 KRTAP9-4Q9BYQ2 154 aa5.7□□□□□ -1.5
CDK5RAP3-215ENST00000579780 KRTAP4-7Q9BYR0 210 aa5.68□□□□□ -1.5
CDK5RAP3-215ENST00000579780 KRTAP4-3Q9BYR4 195 aa5.6□□□□□ -1.51
CDK5RAP3-215ENST00000579780 LCE4AQ5TA78 99 aa5.56□□□□□ -1.52
CDK5RAP3-215ENST00000579780 KRTAP2-3P0C7H8 128 aa5.52□□□□□ -1.53
CDK5RAP3-215ENST00000579780 KRTAP20-1Q3LI63 56 aa5.52□□□□□ -1.53
CDK5RAP3-215ENST00000579780 KRTAP2-4Q9BYR9 128 aa5.52□□□□□ -1.53
CDK5RAP3-215ENST00000579780 SPRR5A0A1B0GTR4 108 aa5.49□□□□□ -1.53
CDK5RAP3-215ENST00000579780 LCE1DQ5T752 114 aa5.48□□□□□ -1.53
CDK5RAP3-215ENST00000579780 DSTQ03001 7570 aaKnown RBP5.42□□□□□ -1.54
CDK5RAP3-215ENST00000579780 KRTAP9-6A8MVA2 160 aa5.39□□□□□ -1.55
CDK5RAP3-215ENST00000579780 KRTAP2-2Q9BYT5 123 aa5.39□□□□□ -1.55
CDK5RAP3-215ENST00000579780 KRTAP2-1Q9BYU5 128 aa5.39□□□□□ -1.55
CDK5RAP3-215ENST00000579780 KRTAP5-5Q701N2 237 aaPredicted RBP5.29□□□□□ -1.56
CDK5RAP3-215ENST00000579780 KRTAP4-9Q9BYQ8 210 aa5.28□□□□□ -1.56
CDK5RAP3-215ENST00000579780 KRTAP5-4Q6L8H1 288 aa5.19□□□□□ -1.58
CDK5RAP3-215ENST00000579780 LUZP6Q538Z0 58 aa5.13□□□□□ -1.59
CDK5RAP3-215ENST00000579780 KRTAP4-11Q9BYQ6 195 aa5.13□□□□□ -1.59
CDK5RAP3-215ENST00000579780 MT1AP04731 61 aa5.12□□□□□ -1.59
CDK5RAP3-215ENST00000579780 KRTAP4-2Q9BYR5 136 aa5.12□□□□□ -1.59
CDK5RAP3-215ENST00000579780 KRTAP6-1Q3LI64 71 aa5.03□□□□□ -1.6
CDK5RAP3-215ENST00000579780 SYNE1Q8NF91 8797 aaKnown RBP5.01□□□□□ -1.61
CDK5RAP3-215ENST00000579780 MT4P47944 62 aa4.97□□□□□ -1.61
CDK5RAP3-215ENST00000579780 KRTAP12-4P60329 112 aa4.96□□□□□ -1.62
CDK5RAP3-215ENST00000579780 HMCN1Q96RW7 5635 aa4.89□□□□□ -1.63
CDK5RAP3-215ENST00000579780 KRTAP20-2Q3LI61 65 aa4.84□□□□□ -1.63
CDK5RAP3-215ENST00000579780 NDUFAF8A1L188 74 aa4.77□□□□□ -1.65
CDK5RAP3-215ENST00000579780 KRTAP5-2Q701N4 177 aa4.68□□□□□ -1.66
CDK5RAP3-215ENST00000579780 KRTAP6-2Q3LI66 62 aa4.67□□□□□ -1.66
CDK5RAP3-215ENST00000579780 KRTAP5-3Q6L8H2 238 aa4.67□□□□□ -1.66
CDK5RAP3-215ENST00000579780 MT3P25713 68 aa4.63□□□□□ -1.67
CDK5RAP3-215ENST00000579780 AHNAK2Q8IVF2 5795 aa4.49□□□□□ -1.69
CDK5RAP3-215ENST00000579780 KRTAP5-10Q6L8G5 202 aa4.3□□□□□ -1.72
CDK5RAP3-215ENST00000579780 LCE3DQ9BYE3 92 aa4.26□□□□□ -1.73
CDK5RAP3-215ENST00000579780 GPR98Q8WXG9 6306 aa4.22□□□□□ -1.73
CDK5RAP3-215ENST00000579780 OBSCNQ5VST9 7968 aa4.17□□□□□ -1.74
CDK5RAP3-215ENST00000579780 A0A0A0MQY5 61 aa4.15□□□□□ -1.75
CDK5RAP3-215ENST00000579780 LCE3EQ5T5B0 92 aa4.12□□□□□ -1.75
CDK5RAP3-215ENST00000579780 KRTAP5-8O75690 187 aa4.11□□□□□ -1.75
CDK5RAP3-215ENST00000579780 LCE1EQ5T753 118 aa4.11□□□□□ -1.75
CDK5RAP3-215ENST00000579780 KRTAP5-7Q6L8G8 165 aa4.06□□□□□ -1.76
CDK5RAP3-215ENST00000579780 KRTAP5-1Q6L8H4 278 aa4.05□□□□□ -1.76
CDK5RAP3-215ENST00000579780 INE1O15225 51 aa3.99□□□□□ -1.77
CDK5RAP3-215ENST00000579780 MUC5ACP98088 5654 aa3.91□□□□□ -1.78
CDK5RAP3-215ENST00000579780 LCE1CQ5T751 118 aa3.81□□□□□ -1.8
CDK5RAP3-215ENST00000579780 LCE1BQ5T7P3 118 aa3.81□□□□□ -1.8
CDK5RAP3-215ENST00000579780 MUC5BQ9HC84 5762 aaPredicted RBP3.6□□□□□ -1.83
CDK5RAP3-215ENST00000579780 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.58□□□□□ -1.84
CDK5RAP3-215ENST00000579780 AHNAKQ09666 5890 aaKnown RBP3.49□□□□□ -1.85
CDK5RAP3-215ENST00000579780 PRM1P04553 51 aa3.46□□□□□ -1.86
CDK5RAP3-215ENST00000579780 KRTAP5-11Q6L8G4 156 aa3.46□□□□□ -1.86
CDK5RAP3-215ENST00000579780 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
CDK5RAP3-215ENST00000579780 KRTAP21-2Q3LI59 83 aa3.31□□□□□ -1.88
CDK5RAP3-215ENST00000579780 PHGR1C9JFL3 82 aa2.91□□□□□ -1.94
CDK5RAP3-215ENST00000579780 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
CDK5RAP3-215ENST00000579780 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
CDK5RAP3-215ENST00000579780 KRTAP21-1Q3LI58 79 aa2.07□□□□□ -2.08
CDK5RAP3-215ENST00000579780 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 5.5 ms