RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 PMAIP1Q13794 54 aa5.09□□□□□ -1.59
GGA3-208ENST00000579743 PP632Q6XCG6 107 aa5.05□□□□□ -1.6
GGA3-208ENST00000579743 MT1GP13640 62 aa5.01□□□□□ -1.61
GGA3-208ENST00000579743 DSTQ03001 7570 aaKnown RBP5□□□□□ -1.61
GGA3-208ENST00000579743 KRTAP12-1P59990 96 aa4.99□□□□□ -1.61
GGA3-208ENST00000579743 KTN1-AS1Q86SY8 53 aa4.99□□□□□ -1.61
GGA3-208ENST00000579743 KRTAP4-9Q9BYQ8 210 aa4.99□□□□□ -1.61
GGA3-208ENST00000579743 K7ERS5 55 aa4.98□□□□□ -1.61
GGA3-208ENST00000579743 KRTAP19-5Q3LI72 72 aa4.98□□□□□ -1.61
GGA3-208ENST00000579743 TNP1P09430 55 aa4.91□□□□□ -1.62
GGA3-208ENST00000579743 LCE4AQ5TA78 99 aa4.9□□□□□ -1.63
GGA3-208ENST00000579743 GPR98Q8WXG9 6306 aa4.87□□□□□ -1.63
GGA3-208ENST00000579743 LCE1DQ5T752 114 aa4.87□□□□□ -1.63
GGA3-208ENST00000579743 MT1MQ8N339 61 aa4.86□□□□□ -1.63
GGA3-208ENST00000579743 MT1LQ93083 61 aa4.85□□□□□ -1.63
GGA3-208ENST00000579743 ROMO1P60602 79 aa4.83□□□□□ -1.64
GGA3-208ENST00000579743 MT4P47944 62 aa4.82□□□□□ -1.64
GGA3-208ENST00000579743 C10orf95Q9H7T3 257 aa4.82□□□□□ -1.64
GGA3-208ENST00000579743 LCE3AQ5TA76 89 aa4.81□□□□□ -1.64
GGA3-208ENST00000579743 PRAC1Q96KF2 57 aa4.81□□□□□ -1.64
GGA3-208ENST00000579743 KRTAP5-4Q6L8H1 288 aa4.7□□□□□ -1.66
GGA3-208ENST00000579743 KRTAP4-3Q9BYR4 195 aa4.7□□□□□ -1.66
GGA3-208ENST00000579743 KRTAP25-1Q3LHN0 102 aa4.68□□□□□ -1.66
GGA3-208ENST00000579743 KRTAP12-3P60328 96 aa4.67□□□□□ -1.66
GGA3-208ENST00000579743 HMCN1Q96RW7 5635 aa4.66□□□□□ -1.66
GGA3-208ENST00000579743 KRTAP4-6Q9BYQ5 205 aa4.62□□□□□ -1.67
GGA3-208ENST00000579743 KRTAP5-10Q6L8G5 202 aa4.56□□□□□ -1.68
GGA3-208ENST00000579743 KRTAP4-7Q9BYR0 210 aa4.55□□□□□ -1.68
GGA3-208ENST00000579743 AHNAK2Q8IVF2 5795 aa4.51□□□□□ -1.69
GGA3-208ENST00000579743 KRTAP12-4P60329 112 aa4.5□□□□□ -1.69
GGA3-208ENST00000579743 KRTAP19-4Q3LI73 84 aa4.49□□□□□ -1.69
GGA3-208ENST00000579743 SPRR5A0A1B0GTR4 108 aa4.47□□□□□ -1.69
GGA3-208ENST00000579743 KRTAP20-2Q3LI61 65 aa4.46□□□□□ -1.7
GGA3-208ENST00000579743 KRTAP5-3Q6L8H2 238 aa4.46□□□□□ -1.7
GGA3-208ENST00000579743 KRTAP5-7Q6L8G8 165 aa4.44□□□□□ -1.7
GGA3-208ENST00000579743 KRTAP23-1A1A580 65 aa4.43□□□□□ -1.7
GGA3-208ENST00000579743 KRTAP5-5Q701N2 237 aaPredicted RBP4.43□□□□□ -1.7
GGA3-208ENST00000579743 LOC100996750A0A140TA64 210 aa4.33□□□□□ -1.72
GGA3-208ENST00000579743 KRTAP15-1Q3LI76 137 aa4.33□□□□□ -1.72
GGA3-208ENST00000579743 LCE3CQ5T5A8 94 aa4.28□□□□□ -1.72
GGA3-208ENST00000579743 MT1AP04731 61 aa4.15□□□□□ -1.75
GGA3-208ENST00000579743 H3BS24 57 aa4.12□□□□□ -1.75
GGA3-208ENST00000579743 KRTAP4-11Q9BYQ6 195 aa4.12□□□□□ -1.75
GGA3-208ENST00000579743 SYNE1Q8NF91 8797 aaKnown RBP4.12□□□□□ -1.75
GGA3-208ENST00000579743 KRTAP6-1Q3LI64 71 aa4.08□□□□□ -1.76
GGA3-208ENST00000579743 KRTAP5-2Q701N4 177 aa4.08□□□□□ -1.76
GGA3-208ENST00000579743 KRTAP9-4Q9BYQ2 154 aa4.03□□□□□ -1.76
GGA3-208ENST00000579743 KRTAP6-2Q3LI66 62 aa3.96□□□□□ -1.78
GGA3-208ENST00000579743 KRTAP5-8O75690 187 aa3.95□□□□□ -1.78
GGA3-208ENST00000579743 KRTAP9-6A8MVA2 160 aa3.93□□□□□ -1.78
GGA3-208ENST00000579743 KRTAP9-9Q9BYP9 154 aa3.87□□□□□ -1.79
GGA3-208ENST00000579743 NDUFAF8A1L188 74 aa3.85□□□□□ -1.79
GGA3-208ENST00000579743 MT3P25713 68 aa3.85□□□□□ -1.79
GGA3-208ENST00000579743 LUZP6Q538Z0 58 aa3.84□□□□□ -1.79
GGA3-208ENST00000579743 A0A0A0MQY5 61 aa3.81□□□□□ -1.8
GGA3-208ENST00000579743 OBSCNQ5VST9 7968 aa3.79□□□□□ -1.8
GGA3-208ENST00000579743 MUC5ACP98088 5654 aa3.79□□□□□ -1.8
GGA3-208ENST00000579743 AHNAKQ09666 5890 aaKnown RBP3.75□□□□□ -1.81
GGA3-208ENST00000579743 MUC5BQ9HC84 5762 aaPredicted RBP3.74□□□□□ -1.81
GGA3-208ENST00000579743 KRTAP5-1Q6L8H4 278 aa3.68□□□□□ -1.82
GGA3-208ENST00000579743 LCE1EQ5T753 118 aa3.56□□□□□ -1.84
GGA3-208ENST00000579743 LCE1BQ5T7P3 118 aa3.36□□□□□ -1.87
GGA3-208ENST00000579743 KRTAP4-2Q9BYR5 136 aa3.29□□□□□ -1.88
GGA3-208ENST00000579743 LCE1CQ5T751 118 aa3.28□□□□□ -1.88
GGA3-208ENST00000579743 INE1O15225 51 aa3.2□□□□□ -1.9
GGA3-208ENST00000579743 LCE3DQ9BYE3 92 aa3.09□□□□□ -1.91
GGA3-208ENST00000579743 KRTAP4-12Q9BQ66 201 aa3.05□□□□□ -1.92
GGA3-208ENST00000579743 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
GGA3-208ENST00000579743 KRTAP5-11Q6L8G4 156 aa2.97□□□□□ -1.93
GGA3-208ENST00000579743 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.95□□□□□ -1.94
GGA3-208ENST00000579743 LCE3EQ5T5B0 92 aa2.88□□□□□ -1.95
GGA3-208ENST00000579743 PHGR1C9JFL3 82 aa2.72□□□□□ -1.97
GGA3-208ENST00000579743 KRTAP21-2Q3LI59 83 aa2.68□□□□□ -1.98
GGA3-208ENST00000579743 PRM1P04553 51 aa2.53□□□□□ -2
GGA3-208ENST00000579743 KRTAP4-4Q9BYR3 166 aa2.48□□□□□ -2.01
GGA3-208ENST00000579743 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
GGA3-208ENST00000579743 KRTAP21-1Q3LI58 79 aa2.09□□□□□ -2.07
GGA3-208ENST00000579743 MUC16Q8WXI7 14507 aa1.64□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 81.9 ms